Aage024245.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aricia agestis
Gene Symbol
clz9
Assembly
GCA_905147365.1
Location
LR990275.1:13269992-13272460[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-07 9.4e-05 22.5 0.1 1 44 14 58 14 59 0.88

Sequence Information

Coding Sequence
ATGGTGCGAAACTATAAGAGAAAAAAAGAAAAGCAATATACTCAAGACCAACTTCTTGCAGCTGTTGAGGAAGTGCGCAGAAAAGAAATAAATAGCTATGATGCTGCAAAAAAATACGAAATCCCAAGATCGACTATTATTGCTCGGTTATATGGTACCAGAGGCTCTAAAATGAATAGAGCTGGAAGACCTTGTGTATTTTCTGCAGAAATTGAAAAAAAAATTGCGTCCTATATTCACATCCTTGAGAGATGTGGATATCCATTGACAAAAAAAGAAATAGTACAAATGATTACAGAATATATTCGACGTAATGGAATTATAACTCCCTTCACAAATGATGTTCCAGGCAAAGAGTGGTTCTTAGCTTTCCGTAAAAGACATAAACTGTCATACAAAAAACCGCAGTCTGTCGAAATGGCACGCAAAAAGGCCTGCAACCCATTTATTGTTTTTGAATACTTTGGTATACTAGAAAAGGTCACGCGAGAGTTAGATCTTTTAGATAAGCCAGGACAAATTTTTAATCTAGATGAAACAAGTTTTTGTTCTGACCCGTCTAGAAGCAAAATTGTTGGATTAACTGGATACCAGTCCACGAGAACAACAAGCGGCCCTGGACGCGAAAACACAACGGTTTTGCTTGCTACTAGTGCCAGTGGCGTAAAGGTACCACCATTAATAATATTTCAAGGAAAGTATTTGTGGAACGAGTGGATGTACCAAAACGATAATGTCAAAACTGCATATGCAGTCAGCCAAAAAGGATGGATGGAAACGACAATATTCGAAAAATATTTGAAAGACATATTTATTCCTGCGATTGGTGACAAAAGACCTGTGTTACTAATATATGACGGGCATTCTACCCATGTGGATTTGAATGTGGTAGAACTAGCAGCATCTAACGGTATAACAATTATAAAATTACCTCCGCATTCATCACATGTGCTGCAGCCTTTAGACTGCAGCACGATGAAGCCAATGAAAGATAAATGGGAAGAAGCTCTTGTTAAATGGCAGCGGTTACACGTAGGTATAAAATTACCCAAGGCAGATTTTGCTCGGATTATCACAGAAATTTGGGATTCACTTAATCCCGTTATACTACAAAACGGATTTAAAAAGACTGGAATTTACCCCGTTAATCGGCATGCAATTGAAGAGACAAAATTTGATTCCTTGTCATGGTTGAAATGGCAGCAACACATAAAACCAACCAGTGCTCACGAGTTTGAAGATTGTTTTACAGAAATATCCTTCGGAGAAGTAGTTAATAACTGTGATCTTCAAAAATCTGACCAAAAAGTGCAAAGTCTTTTGAGTATCGTAATTAGTAATATTAATTCAATATTCGAAATAAATTCAAAAACAAATTTTAAAAGCCTGGTGAGTGTTAAACCTGCGAGTAAGGAGATTCCAATATTAAATGAGAAAAACAATAATTTGACTTTATACAGATCAGGAAACGGTACTGACGGTTACAAACTACTACCACCAAATAAGCGTATCACAGTTCTATCCGATGAAGTAATCGTACCTGCAGTATCTAGTATCAATAAAACTTTCTATTCCCAACATGAAGAGCACATATCATTTGAACAGTTAATTTTACAGTCTATTGCTCGGAACGATATACCCAAAAAGTCGAAAAAGCGTATAAATACTCAAGGTGCAGAAGTGTTAACATACCCAACTACAATAGAGCGAATGAAAAATGAGTTGCAGGAAAGAAAAGAAAAGGAAGCTAAAAAGCAAAGAAAAAGTAAAGGGTCAACATTGAATGAAGATCAGCAGTCTGAGAAAGAAAACCAATATGATGAAAAAGAAACGAAGAAAAAAAAGAAAAAGCTAGCTTCAAAAGCAAACATCGTTAAAAAACCAAGAAAAAGACAATACTCTACAAGAAAAACAGTTATCCAAAGAAATTCCATAAAGAGAAGACGGAAACTTTATAATAGTGAATCCAGCTCAGACTCATTATCTACCAATTTTAGTTTTGATGGCACAGACGATTCAGATAGTGAAACACTTGATCATTTTCTAGCTGAATGTTTAGAAGAAGAAGCAGAAGTTACTGATGATATCTTACACCAGCTAACGCAAAACGATAATTCCGAACTGGAAATACCATTTGGTGTTCATGACATCCAATATGATACTGAAAAAGAATTTAATTTGAAAGAAAATGACTGGGCTATCGTCCGATTCTGCACAAAAAAAAGCGTGAAACATTTCGTTGGAAAAGTTATGACTCTGGATGATGCAAAATGCCCCACAATGAAATTTGTAAGAAAAGTGAAAAATTCTAGGTTTGAAAAGGGCACTACGTTCAGCTATCCAACGGTAGACGATGTATGTGTCATAAAATACTTAGACGACATAAGTGTAGTGTTACCGGAGCCGAAAGTCGCTAGACGTGGGCAGTTAATATTTAATTACGATTTTAGTGAATTTAATGTTCAATAA
Protein Sequence
MVRNYKRKKEKQYTQDQLLAAVEEVRRKEINSYDAAKKYEIPRSTIIARLYGTRGSKMNRAGRPCVFSAEIEKKIASYIHILERCGYPLTKKEIVQMITEYIRRNGIITPFTNDVPGKEWFLAFRKRHKLSYKKPQSVEMARKKACNPFIVFEYFGILEKVTRELDLLDKPGQIFNLDETSFCSDPSRSKIVGLTGYQSTRTTSGPGRENTTVLLATSASGVKVPPLIIFQGKYLWNEWMYQNDNVKTAYAVSQKGWMETTIFEKYLKDIFIPAIGDKRPVLLIYDGHSTHVDLNVVELAASNGITIIKLPPHSSHVLQPLDCSTMKPMKDKWEEALVKWQRLHVGIKLPKADFARIITEIWDSLNPVILQNGFKKTGIYPVNRHAIEETKFDSLSWLKWQQHIKPTSAHEFEDCFTEISFGEVVNNCDLQKSDQKVQSLLSIVISNINSIFEINSKTNFKSLVSVKPASKEIPILNEKNNNLTLYRSGNGTDGYKLLPPNKRITVLSDEVIVPAVSSINKTFYSQHEEHISFEQLILQSIARNDIPKKSKKRINTQGAEVLTYPTTIERMKNELQERKEKEAKKQRKSKGSTLNEDQQSEKENQYDEKETKKKKKKLASKANIVKKPRKRQYSTRKTVIQRNSIKRRRKLYNSESSSDSLSTNFSFDGTDDSDSETLDHFLAECLEEEAEVTDDILHQLTQNDNSELEIPFGVHDIQYDTEKEFNLKENDWAIVRFCTKKSVKHFVGKVMTLDDAKCPTMKFVRKVKNSRFEKGTTFSYPTVDDVCVIKYLDDISVVLPEPKVARRGQLIFNYDFSEFNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00711799;
90% Identity
-
80% Identity
-