Aage007851.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990269.1:10058750-10061908[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-07 9.6e-05 22.4 0.0 1 36 10 45 10 50 0.92 2 2 9.5 3.4e+03 -1.7 0.0 30 44 121 135 116 136 0.72
Sequence Information
- Coding Sequence
- ATGGAAACGAAGAAACGTAAAAAATACACTAACGCAGAGCTAATTTCTGCTTTAGAGTTAATAAAACAAGGTACGAGTATATACCAAGCATCTCGACAATTTAATATACCAGAGACGACAATAAGGAACAAGCGAGATGGTATATATGAAAATGACACTTGTGGTGTACAGCCTGTGCTAAATATTCAAGAGGAAAAACGAGTCGTCGATTGGGTTCACTATCTTGGTAAATGTGGATTTGCAGTCACCAAAGAACAGTTGCTGGATACTGTCGCTGCACTAGTGAAGAATTTAGAACGCCCTAATCCATTTAAAGATGGAAGACCCGGAAAAAACTGGTACCTGCGTTTTTTGAAACGACATCCGACATTAAGCAAACGCGTGGCACAAAATCTTCCTTTGAGTAGAAATCAGATCACAGAAGGATCAATACGAGGGTGGTTTGGAAGAGTTCACTCGTATTTTGAGGATAACAATTTGTTCGAAGTTTTTGAGGACCCGAAACGCATATACAACTGCGATGAAACAGCTTTCTTTTTATGTCCGAAAGAGAAGCAAGTTTTAGTTAAAAAAGCTACTGCAGATGAATTTATAGAGCATCTAAAGCGAACAGAAAAAGAAAAAGATGAGAAAGAAATGCTTAAACAAAAAAGAAAAAATGAAGCTGTAGAAAAGCGGAAGGAAAAGGAAAATATAAAACGACTAAAAGAAACGCAAGCATTACAAAAAAACAAAGAGTCCGTCTACAAACAGAAAACAGTCCCGAAGAAAAAAGGTTCACCAATAGAAAAGCCAGGCAGCTCTCAGCATGTAACTCCTGCTAAGAAGGGCAACAAGCAATCCGGTGAACTGAAGACCTCGTTACGAAGAAAATGTGGTAGCTACGACGATTGTTCTGATTCAAACTTTTCCTTATCAAATAAAAATTCTGACAAAAAACAGAGCAAGTTCTTTAAAAAAAGTGTTTCACCCATAGCAGACTGCTCTCATCAAGTAACTCCAGCTAAGAAAAGAGGCTACAAGGAATCGAGTGAACAGAACACCTACCTAGGAAAAGAAGTTGGCAGCGACGACGATTCTCCTAATTCAAATAATCAATTTTCAATTGTGGGCAAAGCAAAACGCATTTGTTTTTTCGACACTGATTCTGATGACTCTGTAGTTACTGCAAATGAATTGATAGAACACCAAAAGCTAAAAGAAAAAGATGAGAAAGAAATGCTTAAACCAAACTTTGAGGCTGTAGAAAAGGAAAAGGAAAGACTAAAAGAAACGCCACAGGTATTACAAAGTAATAAAAAGTCTGTCAACAAACAGAAAACGGTCTCAAAGAAAACATTTTCACCGAAAGCAAAGCCAGGCAGCTCTCAGCAAGTAACTCCTGCTAAGAAGGGCAACAAGCAATCGGGTGAACTGAAGACCTCGGTACTAGGAAATGTTGGCAGCGACGACGATTCTCCTAATTCAAATAATCAACTTTCAATTGTGGACAATGCAAAACACGTTTGCCTTTTTGACACTGATTCTGACGATTCAGTTTAA
- Protein Sequence
- METKKRKKYTNAELISALELIKQGTSIYQASRQFNIPETTIRNKRDGIYENDTCGVQPVLNIQEEKRVVDWVHYLGKCGFAVTKEQLLDTVAALVKNLERPNPFKDGRPGKNWYLRFLKRHPTLSKRVAQNLPLSRNQITEGSIRGWFGRVHSYFEDNNLFEVFEDPKRIYNCDETAFFLCPKEKQVLVKKATADEFIEHLKRTEKEKDEKEMLKQKRKNEAVEKRKEKENIKRLKETQALQKNKESVYKQKTVPKKKGSPIEKPGSSQHVTPAKKGNKQSGELKTSLRRKCGSYDDCSDSNFSLSNKNSDKKQSKFFKKSVSPIADCSHQVTPAKKRGYKESSEQNTYLGKEVGSDDDSPNSNNQFSIVGKAKRICFFDTDSDDSVVTANELIEHQKLKEKDEKEMLKPNFEAVEKEKERLKETPQVLQSNKKSVNKQKTVSKKTFSPKAKPGSSQQVTPAKKGNKQSGELKTSVLGNVGSDDDSPNSNNQLSIVDNAKHVCLFDTDSDDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00934697;
- 90% Identity
- iTF_00934697;
- 80% Identity
- -