Aage001997.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- clz9
- Assembly
- GCA_905147365.1
- Location
- LR990257.1:3176695-3178019[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-07 5.8e-05 23.2 0.0 1 36 10 45 10 50 0.92 2 2 8.5 3.1e+03 -1.6 0.0 30 41 121 132 121 136 0.62
Sequence Information
- Coding Sequence
- ATGGAAACGAAGAAACGTAAAAAATACACTAACGCAGAGCTAATTTCTGCTTTAGAGTTAATAAAACAAGGTACGAGTATATACCAAGCATCTCGACAATTTAATATACCAGAGACGACAATAAGGAACAAGCGAGATGGTATATATGAAAATGACACTTGTGGTGTACAGCCTGTGCTAAATATTCAAGAGGAAAAACGAGTCGTCGATTGGGTTCACTATCTTGGTAAATGTGGATTTCCAGTCACCAAAGAACAGTTGCTGGATACTGTCGCTGCACTAGTGAAGAATTTAGAACGCCCTAATCCATTTAAAGATGGAAGACCCGGAAAAAACTGGTACCTGGGTTTTTTGAAACGACATCCGACATTAAGCAAACGCGTGGTACAAAATCTTCCTTTGAGTAGAAATCAGATCACAGAAGGATCAATACGAGGGTGGTTTGGAAGAGTTCACTCGTATTTTGAGGATAACAATTTGTTCGAAGTTTTTGAGGACCCGAAACGCATATACAACTGCGATGAAACAGCTTTCTTTTTATGTCCGAAAGAGAAGCAAGTTTTAGTTAAAAAAGATGGCCACACATCACATATATCTTTACCTTTGACAACATTTTGTAAACAAAAAGAAATCGTGTTGGTTGCTTTACTGCCGAATGCTACACACGTCTTGCAACCTCTTGACGTTGCTGTATTTAGACCAGTGAAAGGGACTTGGAAAGATATTGTCCATGATTTCCGTATTAACAATGATTACAAACGACTAAAGCGACCAGATTTTGCTAAAGAAGTTCAAAAATGTTTTGACAGATGTTTGAAGGCAGAAACAATAAGAAATGGGTTCAGATGTTGCGGAATTTTCCCGTTTGATCCAAACAATATAAACTATGAGAAACTTTTACAACAAGCAAAACCACCACAAGAAAATCAACTTACAACTGACGATAGTACGGATCAGAATAATGAGTCACAAAATACAGTATATGTAGATAAAGATGAATGGTTTAAAAAACAATTTGAGAGTCGACTGTCACCAGAAACTTAG
- Protein Sequence
- METKKRKKYTNAELISALELIKQGTSIYQASRQFNIPETTIRNKRDGIYENDTCGVQPVLNIQEEKRVVDWVHYLGKCGFPVTKEQLLDTVAALVKNLERPNPFKDGRPGKNWYLGFLKRHPTLSKRVVQNLPLSRNQITEGSIRGWFGRVHSYFEDNNLFEVFEDPKRIYNCDETAFFLCPKEKQVLVKKDGHTSHISLPLTTFCKQKEIVLVALLPNATHVLQPLDVAVFRPVKGTWKDIVHDFRINNDYKRLKRPDFAKEVQKCFDRCLKAETIRNGFRCCGIFPFDPNNINYEKLLQQAKPPQENQLTTDDSTDQNNESQNTVYVDKDEWFKKQFESRLSPET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -