Aage021296.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- jarid2b
- Assembly
- GCA_905147365.1
- Location
- LR990266.1:13005630-13016878[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-13 3e-10 40.8 0.3 36 89 1 51 1 51 0.92 2 2 3.7 1e+04 -2.6 0.0 56 84 143 172 134 174 0.49
Sequence Information
- Coding Sequence
- ATGTATCACACGGTGCAACGTCTCGGCGGATTGAAGAATGTCTTCGACAAGAAGAAATGGAATCGCGTCGCCGAAGAGATGCATTTCTACCAACTGACTAATCCCAGCAAGAAGCTTGAACAGATATACGTAAAATACCTCCTGCCGTACGATACGCTCACCAACAGGGAGAGACAGATGAAAATCGCCGAAGTGGAACAGATGTGGCAGAAGAAGAATAAGAAGATGCTGGCGAGAGCCTTCAATCCTCTGCACCGACAGAAACGCCTGCTCGGAGATTCGAGTTCGGATTCCGATTCGGATTCGGAGCCAGAGGCGGGTTCGGATTCGGACGAGGAGGTCACCTCTAGCAGCCACAACAGTGACCCGCTAGCTGAGGCAGAAGAGTGCATAGTTACGGGCAGGACTATGAATTTGAATAACTTTGAGAAGGTGGCCCAAAACGCGTTCAAAATGTACACCCCTCCCAACGAGGAGCCAAACACTAAGACCATAGAGAATCTCTACTGGAAGCTGGTGTTGTTCGGTGCTGACCACGTGTGCGTAAACAGTGCAAGCGTTGACACCGGGGAAGAGGGGTATGGGTTTACTAAAAACAAGAGCAACCCGTACGGAAAACATCCTTGGAACTTGAAGATGATAAGTCAAAACAACGGCAACCTGCTCCGCCCCCTGGGTCCGGTGCTCGGTCTGACGGTGCCGACGCTACACCTCGGCATGATATTCTCAACCAGCTGCTGGCACCGGGACCCTCACGCGTTACCCTGGATAGAGTACATGCACCAGGGGCCTGAGAAGATATGGTACGGCATTCCGGACGAGCAGAGCGACAACTTCCGCAAGGCCGTCGAGGTGCTGTGCCCCACCGTCTGCCAGAACAAGGGCATTTGGCTGTCGTCCGACATCACCATGATCCCGCCCAACATGCTGCTGGAGCACGACGTGTCCCTCTCCAAGATCACGCAGAAACCGCACGAGTTTGTCATAGTGTTCCCGAAGGCGTACTCGAGCTCGATCTGCACCGGCTACACGATCTCCGAGAGCGTGTACTTCGCCACGCAGTCCTGGCTCACCACTATGTCCAGCGTCTTTCAAGAGCTGCGCGAGAGCTGCGAGCCGACGACGTTTGCGCTGGAGCAGCTGGTGATGAGCGTGGCGCGGGACGGGCGCGCGCCGCTACGCGTGCTGCAGACCGCGCACGCCGCCTTCGCCGCCCTCGTCACCGCCGAGCTCGCCGCCCGCAGCGCCCTGCGCGCCATAGGCCTCCAGGTGACAGTCAACAAAGGCACCAAGGGTAAGAGAAGACTGATTCGTCACCAGGACGAATGTGAGATTTGTCGTACCACTCTATATCTTTCTAAGGTAAAAGGTGTATTCGGCAAGCAATCGGCGCTGTGCGTGCAGCACGCTATGCGCGTGCTCGTCGAAAACGAAACTGATCTCGACGACAAGAAAATCAACAAAGACAACATAGAATTAGAGATTTTCTTTACTAAGACTGAACTGGAAGAGATTGAACAGAATCTTCAAAAACGCTTATTGAGCTAA
- Protein Sequence
- MYHTVQRLGGLKNVFDKKKWNRVAEEMHFYQLTNPSKKLEQIYVKYLLPYDTLTNRERQMKIAEVEQMWQKKNKKMLARAFNPLHRQKRLLGDSSSDSDSDSEPEAGSDSDEEVTSSSHNSDPLAEAEECIVTGRTMNLNNFEKVAQNAFKMYTPPNEEPNTKTIENLYWKLVLFGADHVCVNSASVDTGEEGYGFTKNKSNPYGKHPWNLKMISQNNGNLLRPLGPVLGLTVPTLHLGMIFSTSCWHRDPHALPWIEYMHQGPEKIWYGIPDEQSDNFRKAVEVLCPTVCQNKGIWLSSDITMIPPNMLLEHDVSLSKITQKPHEFVIVFPKAYSSSICTGYTISESVYFATQSWLTTMSSVFQELRESCEPTTFALEQLVMSVARDGRAPLRVLQTAHAAFAALVTAELAARSALRAIGLQVTVNKGTKGKRRLIRHQDECEICRTTLYLSKVKGVFGKQSALCVQHAMRVLVENETDLDDKKINKDNIELEIFFTKTELEEIEQNLQKRLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -