Basic Information

Gene Symbol
Arid2
Assembly
GCA_905147365.1
Location
LR990260.1:6331317-6361531[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-22 1.7e-18 67.2 0.1 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGGCAAAGTTTCAAATAAATACCAAGTCAAAAGACTATTTACGTGACAAAGAAGCATTTCTAAAGGATTTAAAACAGTTCAACGAAAGCAAAAACATACCATACAAAGTACCAGTTGTCAATGGAATTGAAATAGATTTGTACCTTTTGTATTCTCTCGTGCAGCAGAGAGGTGGACTTGGAAAGGTAAATGCTATGGACACATGGGAATCTTTTCTACGGCAGCTACGCTTACCACATCCATGTGTGAATGGATCAACATTGCTAAGAAAAATATATTCCATGTATCTTGAAAAGTATGAAAGAGCTAAAGGGCCTCCTGGAAGAGATGATGACATGGATATAGACGAGGACCCAAGAAGGACTAGAGGTGGTGGAATGCCTCGAATATCATTTGGTGGGGGCACATATATTTCTGCATCAGGTGAAGCTCTCCGACCTGTTAACCGTGGCGGGGGTCCATCAGAAAGACTGACACTATCACTGCTCTCTCCGATGCCAAATGAACAAGATTTTGCAGTTAATGTGTGCACGGTTCTAGCTGCTGATCACTCTAACCGCCTCCCGCTTAGCACTACACCACACATTTTGGACTTTCTACTGGCACATGCTGGTGTCTACAATCATTCAAGTCTTAGAGACACAATTGGCAGATCATACTATGAGGCTCGAGGTAGATATCCCCACGAGTTCTGGGAGATGCGAGCAGGTGGAGGCGGGGCAAAGGAACTAGCCGATGAGACCAAGTTCATGCAGCCTGGGATTGAGCAACCAGAGCTGATGGTGCAGGCTCTAGCTGCTCATAACACCCTCACAGACTGCCTGATGAATGGTGGTGAGGATGACGAAGCTTTGGAGAAGATTATGGATGATATGGGTGGTGAGGTAGGTCTAGAAGATTGGGTAACAGAACCCTCAGAAGAGGACCAGCTATTCGCCCCTGAGTTGCCCGGAGGCGCGAGCTGTGTGTACACACAAAGAGTTCTGCAGATTGCCTCCATTGTCCGTTCCCTGTCGTTCCATGAGGAGAATCTACAGCATTTGGCTCGCAATACTACTCTTATAAGGTTTTTATTACTCTGTGCCAACTGTTGGGTAGGCTCGCTGCGACAAAGTGGACTGGACACGCTTGGAAATGTGTCTGCAGAATTAATCATAAAGGATCCAGCCACATGCCTCATATCCAGACATGTTTTGTCGACAATTCAGACAGCCCTCTCTTCTCCCGACCGAGCGCGTGTGTTGGCTGCGCTAGAGCTACTCAACAAGCTTGCTCAAAACGAAGCCAATGAAGATGCGTTACTCAAAGCACTTGAGGCTAAGGTGTACAACGATGTATGTGCGCTACTGACACTGCGCGACATAATGGTGCTCGTGTGCACGCTAGAGTGCGTGTACGCTCTCACGTCGCTCGGTGACCGCGCCAGTGAGGCAGTCGCTAAGGTGCCCGGGCTGGTGCACACACTTGTCTCACTCGTCACTGTTGAGGCCCAAAGCTACGGACCCCGTGCCTGTATATTAATGCGCGTGGTCGAGACGGTGAGCGGACCGAGCGTGAACGTCGCGCCCGCCGCCGCGCCTGCGCCCACGCACGCCGCCGTCCATACGCCGGACCCGTCGCACGCTGTACAGCATCAGACCAACCAGGCGAGTAAACCGGAGCAGTCATCGACACCATCCACTCCAGTGTCATCACTGCAACAGTCGCATTTGCAACAGCGAACCGTACAGGAGAACGAGCATTTCGCTATAGCGTGGCTGCGTTCCGCGTACGAGCCGCTCCCCGCGTCCGAGAACGGCGCGAGCGACGCCGCCGACGTCTACCGTCAATACCTCGCCTGCTGCGCCAAGATGGGCCGCAAGGGGGTTATAGCGCCAGCACACTTCCCCAGATTAGTCAGGACCGTATTCGGCGGTACTGTCGGTCCGAACACGGTGTCGACGTCGTCGGGCGAGACGCAGCAGGTGTACATCGGGATACGAGCCAGGGCCGTGCAGTCCAGACCCAGCCAGCCCGCAGGACCGTCATCACCGATTCTGAAAGCACAACTGACTAACAAACCGACGGTGGTCGAAACTAAACCAGCCGTCATACAGTCTCCACAGCCGGTAGCAAGTCACTCGGGCGATAGTCACAATTCCTCGCTGATCAAACACCTGCTCGCCACCAAAGTAAGCCCCGCCCCCGCACCGCAAGTGGCCCAGAGACAACAGAGTCAGCAGAGAGTGCCTACTCCAGGCACCGTACTCGTACAAGCGAATCCAACTGGGAACATGGAGTTAGACCCAGAGGCGCTTATCAAGTGTACTACCATCATACCTGGAGGAGTCGCTGCTACTGAAAATAAGGTTATTATAAGTACTGGTGAAGATTCAGGAATCAAGGACGAGCCCGTACAAATCCAAATCGACGAACAAGCACAACTAACAATTAAGGCAGCTCAGAACAAAATGCTAGCCGATCTGCTTGAGAAGAAATCTAACCCTCCGGTGCAAGTTGTACAGATGGGCCCGCAAATGAATGCGCCCACCATACAAATCACGGAGACGGGCCAAATCGTCCAAGTCAAGTCCGAGAGCAACCCTGTCCTGCAAATTAACGCCGAGTCCGCGCAGGGCCCGTTCTTCCAAATCAAGAACGACCAAGGCCAAGTGATACACGTCAAGAATGAGCAAGGCCAGATTATACAACTGAAAACGGACCAGATTCAAGGGGTTATACAGCAGGCGATGCAAGCCCAACTGGCCCAAGGTCAGATCACTCAGGGACAGATTGTTCAAGGTCAAATCGCCCAAGGCCAGATTACGCAGGGGCAAATGGGTTGTATAATACAGAACGTGAAAAGTGAAAAGGAAATAGTTGATACCGTTGTCACAGACCATTCGTATACGGAACCGCCTTCCAAAAAGCAGAAAACGGAGGAAAAGTCTGACAGCGGTCCACAAGAGAGTGTGTCCAAAACTGCGGCGAATTTGTATGCGGCCCTAGCGGCGTCCGCTTTGGAAGACGAAGATGACCTACTACCACCAAAGCAAGAGCCAGTGGATATAATACAGCCATCAGTTTTGGTGGCAGGACCTTCTGAAGGGTCTATGATCATTCAAGAGCCGATACTGCAGGTGCAGCAGTCGCTGGCGGTGCAGCAGCCGATGTTGCAGGTGCAGCCCATGGACGTGCAGAACATCATCGCCTCGCAGGCCGGACAGATTATACTGCAAGGTGGACTCAACTATTTGGCCCAAAACCTACAAGGGAATCTGATGCAGAAAACTATTCACATCATAGTACAGAACACTGGCTGTGGCCCCCTCACTTTAACGGTGAACAACCCAGGTGGCCTAGACGAGGCGACTCTCCACAGTCTTATAGCGGAGGCAGTCACTCAGCAACAAATTATACAGAACACTGGCGTGATACAGTCGACACAGAGAGTGATAGTAAGCCAGCCCACATTAGTGAACACCTCGCAGGCGATTGCCGTGGTCAAATCCACCATCACACAGAATACGCCGCAGATGGCTCCGAGTCAACAACCGATCATAACGCCGCAACCGCAACCGCACAAGGCGCAATTAGCGGGGCAACCGCAACAGATCGTCGTCACGCAAAAACAACCGCCCGCGCTCATAGCAACCGGGAGCAACATAGTCGGCAACCAAATTGTCGGAACCAACCAACAGATCATACAAGGCAACCAGCAGCTGTTGCAGGGCAACCAGCAGATTATCGCGGTTTCGAACAACCAGCAAATCATTGTGAATACAGCCATGAAACCGACAGTTCAGCGGGTTGTTCAAGCACCTAGAAGTCAGGTGAATACTGTGTCGATATCGGGACCGACCACTACGACTAGCGACAGCAAAACCGTAACCGCTAAGGCACAGCCGGTGATGAGACAGGTGGTCACTCGGCAGCCCGTCATGGTGGGTAACACCAAGATCGGCGACAAGGAAATCGTGAGCACGCAACCAGTGCCTGAGGCGAAACCTCCAACGCCGAAGCCCTCTTCGACGCCCCCGCCGCCGCCGCTGCCGATGGGCATCGACGACAACCCCTGGATATGTCACTGGAGGGGTTGTGGCAAGGTGTTGGCGAGCCCGGCGGAGGTGTTCTCGCACGCGGCGCGCACGCACTGCCCGGGCTTGGCGGGCGGCGAGGCGCCCTGCCAGTGGCTGGACTGCGACCGCGTGCCGCGTAAGACCTTCGCGCTGCTCAACCACCTGTCCGACAAGCACTGTACCGCGCAGGCTCTCAAGTCGCTGTACAACCTGCGCAAACACGCGGCGCTGGAGGCGGACGGCAACAAGCCGGTATCCGTGGGATATCCGCCCAACGCCGCCCTAGCTGCCCTCAATAAACACGCCACAGAGACCTTTAACCCTAGAGAACTGATGGATGAAAACGAGGGTCCAGTCACGAAGAGCATACGACTTACAGCCGCCCTTATATTGAGGAATATTGTTATCTACTCAAATACTGGAAGAAGAATTCTACGGCCGTACGAAGCGCACCTCTCCTCGATAGCGCTCAGCACTGTCGAAGCTTCGAGAACGGTCGCACAGATATTGTACGACATGCACAACATCTGA
Protein Sequence
MAKFQINTKSKDYLRDKEAFLKDLKQFNESKNIPYKVPVVNGIEIDLYLLYSLVQQRGGLGKVNAMDTWESFLRQLRLPHPCVNGSTLLRKIYSMYLEKYERAKGPPGRDDDMDIDEDPRRTRGGGMPRISFGGGTYISASGEALRPVNRGGGPSERLTLSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPHEFWEMRAGGGGAKELADETKFMQPGIEQPELMVQALAAHNTLTDCLMNGGEDDEALEKIMDDMGGEVGLEDWVTEPSEEDQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENLQHLARNTTLIRFLLLCANCWVGSLRQSGLDTLGNVSAELIIKDPATCLISRHVLSTIQTALSSPDRARVLAALELLNKLAQNEANEDALLKALEAKVYNDVCALLTLRDIMVLVCTLECVYALTSLGDRASEAVAKVPGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPSVNVAPAAAPAPTHAAVHTPDPSHAVQHQTNQASKPEQSSTPSTPVSSLQQSHLQQRTVQENEHFAIAWLRSAYEPLPASENGASDAADVYRQYLACCAKMGRKGVIAPAHFPRLVRTVFGGTVGPNTVSTSSGETQQVYIGIRARAVQSRPSQPAGPSSPILKAQLTNKPTVVETKPAVIQSPQPVASHSGDSHNSSLIKHLLATKVSPAPAPQVAQRQQSQQRVPTPGTVLVQANPTGNMELDPEALIKCTTIIPGGVAATENKVIISTGEDSGIKDEPVQIQIDEQAQLTIKAAQNKMLADLLEKKSNPPVQVVQMGPQMNAPTIQITETGQIVQVKSESNPVLQINAESAQGPFFQIKNDQGQVIHVKNEQGQIIQLKTDQIQGVIQQAMQAQLAQGQITQGQIVQGQIAQGQITQGQMGCIIQNVKSEKEIVDTVVTDHSYTEPPSKKQKTEEKSDSGPQESVSKTAANLYAALAASALEDEDDLLPPKQEPVDIIQPSVLVAGPSEGSMIIQEPILQVQQSLAVQQPMLQVQPMDVQNIIASQAGQIILQGGLNYLAQNLQGNLMQKTIHIIVQNTGCGPLTLTVNNPGGLDEATLHSLIAEAVTQQQIIQNTGVIQSTQRVIVSQPTLVNTSQAIAVVKSTITQNTPQMAPSQQPIITPQPQPHKAQLAGQPQQIVVTQKQPPALIATGSNIVGNQIVGTNQQIIQGNQQLLQGNQQIIAVSNNQQIIVNTAMKPTVQRVVQAPRSQVNTVSISGPTTTTSDSKTVTAKAQPVMRQVVTRQPVMVGNTKIGDKEIVSTQPVPEAKPPTPKPSSTPPPPPLPMGIDDNPWICHWRGCGKVLASPAEVFSHAARTHCPGLAGGEAPCQWLDCDRVPRKTFALLNHLSDKHCTAQALKSLYNLRKHAALEADGNKPVSVGYPPNAALAALNKHATETFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRILRPYEAHLSSIALSTVEASRTVAQILYDMHNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00786549;
90% Identity
iTF_01178188;
80% Identity
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