Agoe099424.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- nfxl1
- Assembly
- GCA_949825045.1
- Location
- OX463830.1:3770847-3773312[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 1.3e+05 -7.8 5.6 15 19 135 139 134 139 0.81 2 19 0.051 6.8e+03 0.0 0.2 4 10 170 176 169 178 0.94 3 19 9.8e-07 0.13 15.1 18.0 3 19 187 203 186 203 0.95 4 19 6.8e-08 0.009 18.8 11.7 3 19 240 256 238 256 0.91 5 19 0.63 8.4e+04 -3.5 2.4 6 10 281 285 280 285 0.88 6 19 4e-09 0.00053 22.7 9.6 1 19 291 309 291 309 0.98 7 19 1 1.3e+05 -4.2 1.4 5 10 333 338 333 338 0.91 8 19 5.2e-06 0.69 12.8 21.4 1 18 345 361 345 362 0.97 9 19 6.1e-08 0.0081 18.9 17.5 1 18 396 413 396 414 0.97 10 19 4e-10 5.3e-05 25.9 14.4 1 19 423 441 423 441 0.99 11 19 0.92 1.2e+05 -4.0 0.8 5 10 469 474 469 475 0.71 12 19 5.4e-05 7.2 9.5 5.4 9 19 489 499 487 499 0.90 13 19 0.00062 83 6.1 8.3 1 12 508 518 508 518 0.96 14 19 0.2 2.7e+04 -1.9 3.4 14 18 547 551 547 552 0.85 15 19 2.2e-06 0.29 14.0 4.1 1 11 588 598 588 599 0.97 16 19 0.47 6.2e+04 -3.1 1.6 15 18 613 616 612 617 0.82 17 19 0.00011 15 8.5 12.8 4 18 630 645 628 646 0.85 18 19 1 1.3e+05 -5.0 2.3 9 13 652 656 651 656 0.74 19 19 5.2e-07 0.069 16.0 11.8 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- atGTCCAGAAAATACCGAGACGCCGCTGCTAAGCTGCAGCAAAACGTTAAAAAACATCTTCAAGTCATGAAAGAGGATATCTCTTCGTCTGATGATGAAGATCCGTATGACTCCAGCGTTTTGGAGGGAGTCTTGCAGAGCTACAGGAACGGTGGTGGCGATGCTCACATGCTGCGACGGACGAAGAACCTCCTAGAAGAATCACTGAGCGGCCGACCAGTGACTTGCCTCATTTGTATAGGATCCATCAAACGCCTTGACGCAATCTGGGCTTGCGACCACTGCTACTCCTATTTCCACTTATCCTGCATACAGAAGTGGTCAAACGACAGCATCAGCCTGAGAAGCGAGGAAAACCATGGGCCAGTAGCTGTTGTCAAACAAAAAAAGATTGAATGGTGCTGCCCGAAGTGCCGTAATTCTTATAGCAAAGAAGAAATACCTAGGAAGTATTGTTGCTTTTGCGGTAAAGTCGATGATCCACAATTCCATCCCTGGTTGCTGCCTCATTCATGTGGAGAAATCTGCGGGAAGAGGTTGTCTGTAGGTGACAGCTGTCATCATCGGTGTCTGTTGTTATGCCACCCTGGTCCGTGTCCTCCTTGCCCTCAGATGGTAAATGGAGTTTGCTATTGTAATAAAGAACAGAAAAAAGTGCGCTGCAGTGCAGCAAAATGGTCCTGCAATAAACAATGCCAACATTTACTGTCTTGTAGATCCCATAAATGCGAGAGTATCTGTCATGTGGGAGTTTGTCCCCCCTGCACATATACCAGCTTGCAGGGCTGTCAATGTGGAGCTGAGAAAGTAAAAAGACCTTGCAATGATGTAACATGGCAATGCCAGAAAACATGCAACAAACCATACTCATGTGGTTTCCATAAATGTGAAAAAGTATGTCACTTAGGGGCCTGTGGCTTATGCCCCAACTCAGGCCTTCGATCCTGCCCATGTGGTGCCAGAAAGCAGCATGTGGAATGTCCAGAAGTCCTGGACACTTGTCTTGAAACATGTAGCAAGAAACATGAGGACTGTGGACATTGTTGTCCAGAAAAATGTCATAAAGGAAATTGCCCACCATGCCTGGTTCTTGTTGAAAAGAAATGCCAATGCAACACACATACTAAGTTACTGCCTTGCAGCAAAGAGTTCAGGTGTGACACCAAGTGCAGGGGAACTCGAGATTGCGGAAAACATACTTGTGCTAAGAAATGCTGCAATGGTAACTGCCCCCCTTGTGAGAAAGTATGCGACAAGCCCTTACAGTGTGGACGCCATAAGTGTACCACAGTCTGCCACAGAGGTCCTTGCTACCCGTGCCCTTTAGACTCCAAAGTTACCTGCCGGTGCAAAGAAACTATGGTGACAGTCCCATGTGGCCGTGAAAGACATACTAAACCGCCAAAATGCAACCTGCCCTGCAAAAGCAAGTATAAATGTGGGCATGCAGCAGAAAATATACATTCCTGCCACTTTGGTGACTGCCCACCCTGCAAAGCTGTCTGTGGCAAGACTTACATGTGCGGTCACAATTGCACATCCACCTGCCACGAGAATGTTGCAATCACATTTAAACAGGTTGAAAAACCGGCTACTCCTTGGGAATATCAACCACCAAAGACTAAGATGATGACTTTAGAATGCCCACCCTGTGATGCACCAGTACCTGTAACGTGTTTCGGGGAACATGAGACGGTGAATCAAGCTTGCCACATTGCGGTTCGATACTCCTGTGGACGGGCCTGTGGTCGGCCTAGCTCATGCGGCAATCACACTTGCATCGCAATGTGTCATCTTCTCAAACCAAATTCAGAATTCCCCCACATGCTTTCCTCTTGTGAGCCTTGTGACAAGGACTGTCTTATTGCCCGACCAGAAAAATGTGTTCACAAATGTCCTAATTTGGTCTGTCATCCTGGTTCCTGTCGACCTTGTGAGGTTGTAAGGCGAACTCCATGTCACTGCGGACTTAGCGAGCTACATTTGAAATGCAATGATTTTGTCTCAGCAACTGAGGAAATGATGTCTTGCAAGCAGCAATGTCCAAAGAACATGCCTTGTGGTCACCGTTGCAAAAATACCTGCCATTCTGGGGAATGTAAAGCTCAAGTTTGCACCAAAAAATCTAAAGTCTATTGTCCTTGTGGCAACCTAAAGAAAGAGCTTCCGTGTAATGTTGCCATAGGTAGTAACATTGCTTGTGATGCGACTTGTGATGCAAAGAAAATGGCTGCGCAGTTGGAGAAAGAAAAAGAAGTGAAAAGACTCAAGGAAATAGAAGAAGAGAGGAATAAGAAAGAGCTTGCTGAGTATGAGTGGAAGATGAGTGGGAAAAAGAGAAAGCATAAGGAGAGAAGGGTTGTTGATAGTCAGGACAGAAGGAGCTGGCTTCAAAGGTATTGGGTTCCTATTGTGTCTGTTACTGTAGTGATTGCTGCTTCAACATATTTGATATTTAATatctag
- Protein Sequence
- MSRKYRDAAAKLQQNVKKHLQVMKEDISSSDDEDPYDSSVLEGVLQSYRNGGGDAHMLRRTKNLLEESLSGRPVTCLICIGSIKRLDAIWACDHCYSYFHLSCIQKWSNDSISLRSEENHGPVAVVKQKKIEWCCPKCRNSYSKEEIPRKYCCFCGKVDDPQFHPWLLPHSCGEICGKRLSVGDSCHHRCLLLCHPGPCPPCPQMVNGVCYCNKEQKKVRCSAAKWSCNKQCQHLLSCRSHKCESICHVGVCPPCTYTSLQGCQCGAEKVKRPCNDVTWQCQKTCNKPYSCGFHKCEKVCHLGACGLCPNSGLRSCPCGARKQHVECPEVLDTCLETCSKKHEDCGHCCPEKCHKGNCPPCLVLVEKKCQCNTHTKLLPCSKEFRCDTKCRGTRDCGKHTCAKKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHRGPCYPCPLDSKVTCRCKETMVTVPCGRERHTKPPKCNLPCKSKYKCGHAAENIHSCHFGDCPPCKAVCGKTYMCGHNCTSTCHENVAITFKQVEKPATPWEYQPPKTKMMTLECPPCDAPVPVTCFGEHETVNQACHIAVRYSCGRACGRPSSCGNHTCIAMCHLLKPNSEFPHMLSSCEPCDKDCLIARPEKCVHKCPNLVCHPGSCRPCEVVRRTPCHCGLSELHLKCNDFVSATEEMMSCKQQCPKNMPCGHRCKNTCHSGECKAQVCTKKSKVYCPCGNLKKELPCNVAIGSNIACDATCDAKKMAAQLEKEKEVKRLKEIEEERNKKELAEYEWKMSGKKRKHKERRVVDSQDRRSWLQRYWVPIVSVTVVIAASTYLIFNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162190;
- 90% Identity
- -
- 80% Identity
- -