Agoe023846.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- HIVEP1
- Assembly
- GCA_949825045.1
- Location
- OX463810.1:15597086-15604992[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00097 0.25 14.6 0.7 2 23 138 159 138 159 0.97 2 8 0.00091 0.24 14.7 1.2 1 23 165 189 165 189 0.89 3 8 0.003 0.79 13.1 0.0 1 21 423 443 423 444 0.95 4 8 7.2e-06 0.0019 21.3 1.3 1 23 1179 1201 1179 1201 0.99 5 8 1.3e-05 0.0033 20.5 4.7 1 23 1207 1231 1207 1231 0.92 6 8 1.5e-05 0.0039 20.3 0.9 2 23 1618 1639 1618 1639 0.97 7 8 0.0027 0.7 13.2 1.0 1 23 1645 1669 1645 1669 0.92 8 8 0.02 5.2 10.5 2.0 3 23 1692 1714 1690 1714 0.92
Sequence Information
- Coding Sequence
- ATGCCGCTTACTCAGAACAAAATGGACTGCAATGTCAGCAACAACAATGATCACAACTATTTGCATAAAAAGTTCAAGAAGATGGCATCGACGCTTCCTGCGTCACCCTCAGAGTCAAAAGAAGAGACAACAACCAGAGACACTAATGTGGCCAGAATAGAGACCAATGTGTCTCTTCCGAATGGAAACATTCCCGCGTCTCTGTCAGCTATACATAAGCTACAAGTACTATTCAACGAGGAAAGAAATGtacaaaatacttttaaatGCAACAACGTTAGGTTAAGTGATGTAAATAACTTTGAACAAACACCTGGTAAAACCAGCTTTTCAAATGAATTTTCCAATAAGACTGAAACACTTGATAATGATTTTACTAAAGATATTCAGAATGGCCCAGGCGGACGTAACGTGTGCCCATACTGCAAACTGTCATGTGCCAAGCCTTCAGTTCTTCGTAAACATATCAGAGCTCATACGAACGAGAGACCTTATCCATGTGTACCCTGCGATTTCGCGTTCAAAACAAAGTCTAATTTATACAAGCATCAAAGGTCTCGAACACATGCATTGAGGTCACAAGGAGCAGATATCCCCGTAACTAATGAAGAAGATCTCTCAGCGGAATCAGAAAGCGACACTTCGTTACCGCCCACATCTGTATCTGACCCAGGCTCAGACGCATCTAACCTGCGGCTAGAAATACCACGCCCAAATGAGTTTTCCTCGCCTGAGCTGTCCAGCGACCGAAATACACCCCCGACACTAAACAACTTGTCTTCAAGTGACAATGCCAAGTTCAAGCTCTACAAACCTAAGTTCCGGGCTACCCTATATTCGGATGCGGACGAAAAAGATAGGGCCAGGAAACCCTTTTCCCCAAACGCAGATTTTTTAAATGAACATATCTCCAAAATAATATCTGACAATGAAGCTATAGTGGATATTATAGAAACTCCACTTATAAAGAAATATGGTAAAATTAAACAGATAGCTGAAAGCAAACAGTTACATCAGATGAACGAAAATAGTGAAACGAAGTTTGAACTATCTCCGCTGAACTTAACAAAAAGTGGTAATGACACCGAAAGTAGTTTTAGAAAGAGATCCCACTCAGAAACCTTTTCACAATTAGACTACCAAAAACATCCATTGAATCCGGAAGGTTCTATTATTAAAGACCTCCTGCTGAAAACAAAAGGCCTAAACGGTCTATCTCCTATAAATGGGGAAACAGTCGAAGCCTCTGGTGGTCAAATGCCTCTGTTTGTGTGTCCATTGTGTCAGATCCCCTACAGAAGTGCAGATAATCTAGAAATACATAGAATGTATTACTGTAAAGGAATTGCCTCTAATACTAATATTACAAAAGATACAAAAGTTGCCAGGCCAGACAACGTATTTGTCAGAAGCAACTCTGTCAATGTTCGTTTGCCAGAATCTCCTACGTTGATGAAATCTTCGAAATCACCACCACTACGGCCAAATAAACCAGATAATCTAATAATTATAAAGACAGAGTGTAACGACGTTATCGCTCCCTTACCCTCGCCGGGACCTCTACTGGGTAACACCAGACTTGTCGACACGAGAGTGCCTTCCGAATATTCTAGGAAAACTGAAAGTTTAAAAATTAAGTCTAGTACTTCGAGTCCAAGAAGAAGAATCGAAAGTAGGTACGACAGCAGCAGCCCTAGCTTATCAGAAAATTCATCACCACGTCCTATAGAGGCGTATTATAGTAAAATACGCAGCCTTGATACGGGATTGGGTAACCCCGGAAGCTTGCGTTCAATGGATGAAATGTCTCAATCTCAACACACGAAGCACCCAACATCTCTGCAAATGTTTGGCGGAGCAGTCAAAATAGTTAATACTTCTGGTGGCACGACAACACTGCGCATTGAGCCAAGTAAACATCAACTGTCGCCGATATTAATACAGCAAGCATCTCCGACAAAACAGAACAGCGAAGCGGAAGCTAACATAATCGTGCGATCAGGGCTGTTGTCAGGAGGAACAATCGTGCATAATCCCCAAACACCCAAGAATGTTAGCACACAGCAGCTTTCTAGACTGTCTCAATCGACAACTCCGGCTAGCCTTCACAGTGTTAACTTATCTATGCAGGATATTTCACATTTTCAATTTCCTCCACTTAGTGACATCACAGCTTATAATCCGTTGACCTTGCCACCACTTAGTCCATCGACGCCAAATGGCGCAACGTCAATTGTACACGGTGGAAAGTTGATACCACATGTTCCCGGCATTCCAGGACCGAATACTCCATCAATCTACGTAGGATCACCTAGCAACGTGCATTCCAAGAACGAGATTCTCATAAGTCCATTGGAAACGACCACAACAGATAATAAACAATGTTTTTTGTCAATGAACATATTGCCtaataacaatttcaatatTCCGAAGTTTGAAATTAGTCATTCTAGAAAAAGTCCAATTGATAGACCTTCTCAAAgtgaaatagataaatacaattcaaaaacaaacTTGCATAGTACTGAAAGAAAATTGACAATGCCATCTATCAAGGTCAAGAATGTTGATGAACCCTCCTCAAAAGCTGCACAATCTAATATGGTGAAACCGATAACACCCAGACACGATGGCGGCATGAAAAGAAGCATTGATGGTGTGCCGCGGAATAATATTCTGAGAGAAAACGTTTCAAGTAAAATTAGAATTGCTGCTGATACAATCAATGTTTCTAAAAATATTGATCATAAAACAACGGAAACAGAAATGCGTAATTTTAATTTCGAGAATCTGATCACCAAAGCGGAAATATACAATAATCAGATCCCAAGCTCGTCTGAAGTGCAAAAGAATAACAACGAACCAGAAGCTCTTAATGATTTATCACAAAACGAACGTTCCGAAACCTCATACTTTCAAAAGAATACTAACGTAAAATCTGGATCAGACCAACGGAAACCTAAATTTTTGCGACCATCTACATTAGCATTGAAGCCTGGAACTTTCACACCTAAAAGGCACCATGGGATTACGCCTAATGCCAATACTATGCCACTAGTGTCACCTGAAACACCACGTCCGGCCAAAGCATATGGACAGCTTTATTTAAATGGAAACGCTTATACATATCTTGGGCTCAAATGCTCGACCAAAGTTTTCTACTGCACTATCAACCGACCGCAGCCAACGTATGTCCCGAAACAACACTTCTTATCCATGTACAGCAACTGGCAGCTACTATCGGAGTTGACTCCAGACCCGCTGGGCCTATCAGCATCCTCCGCCATGTCGCTGTATGATTCACGACATCGTCCGCAAAACACAATCGTATCTGAGATTAAACAGGATCTCATACTAACTCATTCGTCGCAGTGGAAAAAGATTAGGGATACTCAGATAATGCAAACTAGCGAATCTAGAAAATCGGACGAAGGCAAGCTAGCAGACGGCTCAATCGTCCCCAAGAAGGAGCTAACAGGAGGTTTCGAGAGCAACGAGGAGTACACGTATATCCGCGGTCGCGGCCGAGGCCGCTACGTGTGTGCCGAGTGCGGCATTCGGTGCAAGAAGCCCTCCATGCTCAAGAAGCACATTCGGACTCACACCGACGTGCGGCCGTATACTTGCACGCATTGCTCTTTCAGTTTCAAAACAAAAGGGAACCTCACGAAGCACATGAAGAGTAAAGCCCATTACAAGAAGTGCTGCGAGTTAGGCATCAACCCCAACGAAGGTGCCGATTTGGAAGGACCAGACTCGCAATGTCCCGACGATTCTGATGAGGAGTCGGAATCCGATGGCGATGAAGGAAATGAGGGAGAGACTGAATCCAGTGACACAGAGGCGTGCAAGTCCCGGCTGCCAGAGCACGAGGCGGCGCACTGCCTGCTGTCGCTGGGCGGCGGCGCCCGGCCCCGTGTCTCCGCCGCGCCCGGTCTCGTCACCAGTGCGCGCCCCTCCACCTATCCCTACAGCTCCGAGCACTCCGAGCACTCGGAGCCCGACCCGGCACCGCGCAAGCCCAGCGACGAGCCCATGGACCTCAGCAGGCCCGAGCCCCGGGTCCCCAGCCTCACGGAGATCCCGACGGAGCGCGAGTCCAGCGTGCTGGCCTCTCTCGCCTCCAACGCGGCCAAGCTGCCGCATACTCCAGCGCAGTGGAGCAGTGGCGAGCCCATGCTGCACGCGTACCTCACCGAGCGAGCACTCCTCGACACCAGGATCAAGCAGAGCCAGTTCACGAGCAGCAAGCTGCGGAAGATGGAGTCGGAGAAGTCGTCCTCCATGGTTGCCTTCACGAGCGCGAGCTGCGTGAATGTCGTGGCGTCCATGCCGATGTCCTCCTCGCACGCTATGACGACCGATTCCATCAAACCCGTAATGACGACCGCCAGCAGCAGCAGAATCGATATTTCCGCCGCGCCCGCAGTACCTCCCGTCCCCAAGGAGGAACCCGTCAAGCTCCCGCCGCTGGTCCCGTCGCTCACGAACGATCCTCCGGCGGCGTCGACTCCCGCAGTCGACGTCAAAAAGACCCGCACCGAAGGAAACGCCGAGAATGCGAAATTTGTCGTATCAGAGTACCTGAAACAGTCGAGAGTCAACGCCGTCAATGAGCACGCGAAACAATCGGAGTTCGCCAGCGACGCCATCATGAGAAGCGGCGACGTCGGAGCGGACGACGCGCTCAGCGACTCGGACGCGACGAAGCTGCCCGGCACCGACCACGAGCCCGTCGCGCGCAAGGTCGTGATCGGCGTCGGCGGCGTCGCCTTCAAGGTGAGCAAGGGCAAGGAGTTCGACGGCGCTGCTTCCTACGCGAGCGGCCGCCTCATGGAGGACGGCCGGCGCGTGTGTGACTTCTGCAACAAGACGTTCACGAAGCCTTCGCAGCTGCGTCTACACCTCAACATCCACTACATGGAGCGGCCGTACCGCTGCGACGCGTGCGCTGTGAGCTTCCGCACGCGCGGCCACCTACAGAAGCACGAGCGCTCCGGCTCGCACCACAACAAGGTGTCCATGACGTCTGCGTTCGGCGCTGCCACCTCCATGAACCCGCGCCCCTTCGGCTGCTCCGACTGCAACATCGCGTTCCGCATCCACGGCCACCTCGCCAAGCACCTGCGCAGTAAGATGCACGTGATGCGGCTCGAGTGCCTGTTCAAGCTGCCCTTCGGCACCTTCACGGAGATCGAGCGCGCTGGCGTCAGCCTCACCGACATCGACACGGCGGACTGCGCGTCCTCGCTGGCCAGCCTGCAGCTGCTGGCGCGACGTCTGCACGACCTCGACCCCACCAAGCTCGAGTACCGCGACGTGTCCGACGGCCCGCCCGGCGTGCCCGGCCCGCCCGGCATGCCCGGCGACGACGACCCGCCCACCGAACCCGACAGAGACCCGGACGCGCGGACTATCGACAGTGACGCTCACGATAGAGAAACGCGAGTTATGTTTAGTGCCACGGATAATTAG
- Protein Sequence
- MPLTQNKMDCNVSNNNDHNYLHKKFKKMASTLPASPSESKEETTTRDTNVARIETNVSLPNGNIPASLSAIHKLQVLFNEERNVQNTFKCNNVRLSDVNNFEQTPGKTSFSNEFSNKTETLDNDFTKDIQNGPGGRNVCPYCKLSCAKPSVLRKHIRAHTNERPYPCVPCDFAFKTKSNLYKHQRSRTHALRSQGADIPVTNEEDLSAESESDTSLPPTSVSDPGSDASNLRLEIPRPNEFSSPELSSDRNTPPTLNNLSSSDNAKFKLYKPKFRATLYSDADEKDRARKPFSPNADFLNEHISKIISDNEAIVDIIETPLIKKYGKIKQIAESKQLHQMNENSETKFELSPLNLTKSGNDTESSFRKRSHSETFSQLDYQKHPLNPEGSIIKDLLLKTKGLNGLSPINGETVEASGGQMPLFVCPLCQIPYRSADNLEIHRMYYCKGIASNTNITKDTKVARPDNVFVRSNSVNVRLPESPTLMKSSKSPPLRPNKPDNLIIIKTECNDVIAPLPSPGPLLGNTRLVDTRVPSEYSRKTESLKIKSSTSSPRRRIESRYDSSSPSLSENSSPRPIEAYYSKIRSLDTGLGNPGSLRSMDEMSQSQHTKHPTSLQMFGGAVKIVNTSGGTTTLRIEPSKHQLSPILIQQASPTKQNSEAEANIIVRSGLLSGGTIVHNPQTPKNVSTQQLSRLSQSTTPASLHSVNLSMQDISHFQFPPLSDITAYNPLTLPPLSPSTPNGATSIVHGGKLIPHVPGIPGPNTPSIYVGSPSNVHSKNEILISPLETTTTDNKQCFLSMNILPNNNFNIPKFEISHSRKSPIDRPSQSEIDKYNSKTNLHSTERKLTMPSIKVKNVDEPSSKAAQSNMVKPITPRHDGGMKRSIDGVPRNNILRENVSSKIRIAADTINVSKNIDHKTTETEMRNFNFENLITKAEIYNNQIPSSSEVQKNNNEPEALNDLSQNERSETSYFQKNTNVKSGSDQRKPKFLRPSTLALKPGTFTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPKQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNTIVSEIKQDLILTHSSQWKKIRDTQIMQTSESRKSDEGKLADGSIVPKKELTGGFESNEEYTYIRGRGRGRYVCAECGIRCKKPSMLKKHIRTHTDVRPYTCTHCSFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGADLEGPDSQCPDDSDEESESDGDEGNEGETESSDTEACKSRLPEHEAAHCLLSLGGGARPRVSAAPGLVTSARPSTYPYSSEHSEHSEPDPAPRKPSDEPMDLSRPEPRVPSLTEIPTERESSVLASLASNAAKLPHTPAQWSSGEPMLHAYLTERALLDTRIKQSQFTSSKLRKMESEKSSSMVAFTSASCVNVVASMPMSSSHAMTTDSIKPVMTTASSSRIDISAAPAVPPVPKEEPVKLPPLVPSLTNDPPAASTPAVDVKKTRTEGNAENAKFVVSEYLKQSRVNAVNEHAKQSEFASDAIMRSGDVGADDALSDSDATKLPGTDHEPVARKVVIGVGGVAFKVSKGKEFDGAASYASGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPYRCDACAVSFRTRGHLQKHERSGSHHNKVSMTSAFGAATSMNPRPFGCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTADCASSLASLQLLARRLHDLDPTKLEYRDVSDGPPGVPGPPGMPGDDDPPTEPDRDPDARTIDSDAHDRETRVMFSATDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -