Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463817.1:3612864-3619538[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0023 0.61 13.4 1.7 3 23 31 51 29 51 0.97

2 13 0.00019 0.049 16.8 0.4 1 21 89 109 89 112 0.90

3 13 0.0044 1.2 12.5 0.8 1 23 114 137 114 137 0.89

4 13 6.4e-05 0.017 18.3 0.8 1 23 171 193 171 193 0.96

5 13 0.024 6.3 10.2 0.6 2 23 224 246 223 246 0.94

6 13 1.7 4.5e+02 4.4 3.1 1 19 253 271 253 275 0.91

7 13 9.2e-05 0.024 17.8 1.9 1 20 281 300 281 302 0.95

8 13 0.1 26 8.2 0.3 6 21 327 342 320 342 0.84

9 13 0.69 1.8e+02 5.6 0.7 2 23 350 371 349 371 0.94

10 13 0.2 52 7.3 0.3 1 23 376 398 376 400 0.91

11 13 0.0005 0.13 15.5 0.7 1 23 404 426 404 426 0.97

12 13 5.5e-05 0.014 18.5 0.2 2 23 433 454 432 454 0.97

13 13 7.4e-05 0.019 18.1 3.3 1 23 460 483 460 484 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0023	0.61	13.4	1.7	3	23	31	51	29	51	0.97
2	13	0.00019	0.049	16.8	0.4	1	21	89	109	89	112	0.90
3	13	0.0044	1.2	12.5	0.8	1	23	114	137	114	137	0.89
4	13	6.4e-05	0.017	18.3	0.8	1	23	171	193	171	193	0.96
5	13	0.024	6.3	10.2	0.6	2	23	224	246	223	246	0.94
6	13	1.7	4.5e+02	4.4	3.1	1	19	253	271	253	275	0.91
7	13	9.2e-05	0.024	17.8	1.9	1	20	281	300	281	302	0.95
8	13	0.1	26	8.2	0.3	6	21	327	342	320	342	0.84
9	13	0.69	1.8e+02	5.6	0.7	2	23	350	371	349	371	0.94
10	13	0.2	52	7.3	0.3	1	23	376	398	376	400	0.91
11	13	0.0005	0.13	15.5	0.7	1	23	404	426	404	426	0.97
12	13	5.5e-05	0.014	18.5	0.2	2	23	433	454	432	454	0.97
13	13	7.4e-05	0.019	18.1	3.3	1	23	460	483	460	484	0.97

Sequence Information

Coding Sequence: ATGGCTCCACCAGCAGACCCGGTCCCTGACGGGCATTTTCCCTACCCCAGTCTTAAACTCACAACCATCAATGTCATCGGAGGCATCTTCTGTAGCATCTGCAAAATCACATTCAggaataaaaaagaatatgatGATCATTACAAGAAACATAAAAAATCTGATTGTGAAATAAAATACACATGTGTTGTCTGCCATCGGGAAATCCTTGGTTATGCCAGCTTCAGGGGGCACTGTTACACCGCTCATGTTTACAAGGAACGATTCAAGTGCAACATTTGTGCCAAGCAATTCTCGAAGCAATCTGCTCTTAAGATCCATAATGAAGCCATGCACCTGTTCAAGTGCAGAGCTCCGTGTAACAAAGAATTTACATCAAAACGAGAGCTCAAATTGCATCAAGTAATCCACATAGAGCATGGACCTCCATACCCATGCCAAAAATGCCAAGCCAAGATCGACACCCTGGACACCTGTGAACAGCATCTGGACAAACATGTCCTTTACATCTACTTGTGCCCCATCTGTGAGAAGAAATTCAACGATAGATCTACTATCACACAACATCTAACAACACATTTCAAAGGAGAAACATTCCAATACATAGAATCAACAAAAACAGAAGAAGCTGATAATGATAACGCAGCTATCACAGCTCTAGGGGGCATTTACTGCAATATCTGTGACAACACATACAAGAACAAGATAGATTTTGATAACCACTTTCAGTCCGACCATCCAGAGGAAGACTTTGAGTATTCATGCAACAAATGCGGGGAACAATATGAAGAGTATTTCTCATTGGCCAGTCACTGCTATAATCACTATGTGCAGGGCAAATTCCAATGTGGCCACTGCTCGCGCTCGTTTAAGCGGAACTCTCTGCTCGTCGCTCACGTATGCGACGAGGGCTCGCGAGTGCAggcggcggcgacggcggcggtgGGCGCGCTCGGGTTCACTTGCGGCGATGGCTGTTGCGGCGAGACGTTCAAGAGCACTAAGGAGCTGATCATCCATCAGAACTGCATGCGTCAGATCGAATCGTACTGTCGCCAGTGCGGCATGGAGTTCGACTCGCTCGCCGCCTGCGAGAAGCACCTCGACATGCACAAACACAAGACCTTCAACTGCCCTGTGTGCGATCGGGCCACCAGCGCCAGATTCCGGGCCAACCAACATCTGCGAGCGCACTTCCAAAGCGTCCTCCACATTTGCAAAATCTGCGGCAAAGTCTACAATGCTAAGTACCGACTCGTAGAGCACTTGAAAGTACATTCAGAAAGCCATAAGATGGAGTGTGAGGTGTGTGGAAAGAGATTTGTGCTGCCGGAGCAGTATCGCCAACATGTCCGCTCGCACACAGGGGAGAGACCCTTCGAGTGTGCTGTGTGTGGGAAATGCTTTGTCAGCAAACCTAACTGGTACAAGCACCTGAAGCGAATGCACCACGAAGTCGACCCAAAGACAGTGACAGGACCGGAgatacaaaaaattcaaacCACCAAACTTTCGGGAAAGAAAGAGGAAAAATCTAAGAAAAAAACAACCAAACTTTCGCGAAAGAAAACGGAAAATTCTACAAAAATGGATGAGATGGTTCTTGAGAATCAAACCGATGAAGAACTGTCAAACGAAACATATGTCGATTCGAAACCCTTCGAAATATCCGATAGAGAAGCCTTCGGCTCCGACATACATTATTTCAAAACTAATAAACTAGTAATCGAAATAAACCCAGGAATCTTAGAAGTGACCAGCCTGGCTTCACTGGAACCCAGCAGTGAGGCCGAGGATACGGAACTCGAAAGTATCGAGCCTAGTATCGTGGACGAGGAGACAGATCTGACCTTCTCCGAGGACCTGTCGCGAGCCACCAGCAGCTCTTCAATGGATAATCCTCGCGTGTGCTATCAAAACTCCGTTATTTCAGATGCATCCTCACACCAGTGGTCTTCCGAGGCCCCAAACTACCCATGTGAGTATGGACCCGAGTTCATAAACCAGGGTCTCGACACGACCCCCCACAGCGGCCACATCATAAACCTCGACGACCACATACTACCCCACATCGACCCGCTACTCACCATCCAACCAACGTTGCAACAAGCAGGGTCAAACCACCCGATCGCTTGCTACAAACGCCCGACCGAACCGGACGATCTCACTGAAAAGTGGGAACCCCCGATCATTACTAAAATCATGCAAAGTTACACGTTTGATCAGATGACAGATATCAGCGCCACTATACTGTCTATGATGAAAACCGAATTCTACTAG
Protein Sequence: MAPPADPVPDGHFPYPSLKLTTINVIGGIFCSICKITFRNKKEYDDHYKKHKKSDCEIKYTCVVCHREILGYASFRGHCYTAHVYKERFKCNICAKQFSKQSALKIHNEAMHLFKCRAPCNKEFTSKRELKLHQVIHIEHGPPYPCQKCQAKIDTLDTCEQHLDKHVLYIYLCPICEKKFNDRSTITQHLTTHFKGETFQYIESTKTEEADNDNAAITALGGIYCNICDNTYKNKIDFDNHFQSDHPEEDFEYSCNKCGEQYEEYFSLASHCYNHYVQGKFQCGHCSRSFKRNSLLVAHVCDEGSRVQAAATAAVGALGFTCGDGCCGETFKSTKELIIHQNCMRQIESYCRQCGMEFDSLAACEKHLDMHKHKTFNCPVCDRATSARFRANQHLRAHFQSVLHICKICGKVYNAKYRLVEHLKVHSESHKMECEVCGKRFVLPEQYRQHVRSHTGERPFECAVCGKCFVSKPNWYKHLKRMHHEVDPKTVTGPEIQKIQTTKLSGKKEEKSKKKTTKLSRKKTENSTKMDEMVLENQTDEELSNETYVDSKPFEISDREAFGSDIHYFKTNKLVIEINPGILEVTSLASLEPSSEAEDTELESIEPSIVDEETDLTFSEDLSRATSSSSMDNPRVCYQNSVISDASSHQWSSEAPNYPCEYGPEFINQGLDTTPHSGHIINLDDHILPHIDPLLTIQPTLQQAGSNHPIACYKRPTEPDDLTEKWEPPIITKIMQSYTFDQMTDISATILSMMKTEFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -