Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463809.1:1899219-1901066[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00024 0.063 16.5 0.2 1 23 312 334 312 334 0.97

2 10 0.16 41 7.7 2.5 1 23 338 361 338 361 0.94

3 10 0.0002 0.051 16.8 2.4 2 23 368 390 368 390 0.96

4 10 2.5e-06 0.00066 22.7 0.2 2 23 395 416 395 416 0.97

5 10 0.00022 0.058 16.6 1.4 2 23 424 445 423 445 0.97

6 10 0.019 4.9 10.5 1.4 2 22 454 474 454 478 0.92

7 10 0.001 0.26 14.6 3.6 1 23 486 509 486 509 0.95

8 10 0.0012 0.3 14.4 4.8 2 23 516 538 515 538 0.95

9 10 1.5e-05 0.004 20.3 2.9 3 23 549 569 548 569 0.98

10 10 0.00019 0.05 16.8 0.1 1 23 575 598 575 598 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00024	0.063	16.5	0.2	1	23	312	334	312	334	0.97
2	10	0.16	41	7.7	2.5	1	23	338	361	338	361	0.94
3	10	0.0002	0.051	16.8	2.4	2	23	368	390	368	390	0.96
4	10	2.5e-06	0.00066	22.7	0.2	2	23	395	416	395	416	0.97
5	10	0.00022	0.058	16.6	1.4	2	23	424	445	423	445	0.97
6	10	0.019	4.9	10.5	1.4	2	22	454	474	454	478	0.92
7	10	0.001	0.26	14.6	3.6	1	23	486	509	486	509	0.95
8	10	0.0012	0.3	14.4	4.8	2	23	516	538	515	538	0.95
9	10	1.5e-05	0.004	20.3	2.9	3	23	549	569	548	569	0.98
10	10	0.00019	0.05	16.8	0.1	1	23	575	598	575	598	0.97

Sequence Information

Coding Sequence: ATGGCCAGTGCAACCGAGGACCTTGCGTCGAACCCAAACAATTCGGAAAACATAAGATCCGTCTTGTGTGCTACTTGTCTGAGCGTCGATCGAGTTTTACACCCGGCGGCAGCACTTCGTGACCTGGTGACTGTGTTGAATGATGTTGGTCTGAATATGAACGACAGCATCTGCTGGGAGTGTCGTGCAATAATGGAGAAGTTCGACAAGTTCAAGAATCAGGCAAGGAGATCAATTTCCACCCTTCACTCCTTGGTGGGTAACAATAACATCGATATTACCGATATTTACAATCAAGTACGCAGCTTATCAACCCTAGAGAAATCCACAAAGAATAACTTTGATGCACAATTTCGTTTTCATATCAAGGAAGAGATAATTGAATTTGGTCATAATGAACAGTACAGTGTAGACATAGAACCTTGTCAAGTAAAGaaagaagtatttttattaCCCAATCTCCAAAGAGAAACTGTACCTGTTGAGTATTCTAATAAACAGCTTTACATCACTATTGTACCAATGCCAGTTCCATCAGCTGGATCAAAACTAACATTACCTGACTCTCCTCTAGAAAAAACTTCACAGTTTCCAAGCACATCAATAAAAGTTAGTCTTTCTGAATGTGGTTCATCATCTGATGATGATAATCATGAGGACAATGTTGATGAAGataatgaagatgatgatgaaaagGCAAGGAGAGGGAGCAAGTTGAATAAAGGTAAAAAGCAGTCAAGTACTTTCAGTAACACAGATTTGTTTACTAAGATATTAACTGAAGATGAAATGTTGAAAAATAGGGAAGAGGAGAGGGAACAAACAGGATTCAAGAATGCAAAACATCGCTGTATGTCCTGCATCAAATACTTTGCATCAATACATGCATTGAACAAACATAACTTACTGCACTGTCCGATACAGCAAGGCCAATTTGCATGCTCCATCTGTGACCTGAGGTTCATCAGCCAAAAAGCCGTAATGATTCATCAACAAACACactacataaactactactgtCGCTACTGCAGCTACAGCAGCTATAGCCAGCAGCGGCTGATGAAACATTGGCAGGGAAGACATAACCCAAGTGCCAAAAGGGAATGTAAAGATTGCGGAGTGGAGTTCCGTAACCTCAGGCACCTGCGCTATCACAGGAAGAAAGCACACAGTGAGAAGCCACGCTGTGTTGAGTGTGGGAAGACATTTGCTGCCTCCAGTAGCCTCAACAGGCACATGCTCATTCACAAAGGCACAATACCAGAAGTGGAGTGTGACATTTGCCATAAAAAGTGTGGTGGAAGTTGGGGGTTGCGTGCGCACATGCGCACACATGATGAATCACGAGGAGAAGATGCCTACTGTACAGAATGTGATATACAATTCAAGAATATACACCTATATCAAGCACACTTAAAATCGAACAGCAAACATGTTGACCGTGAGACATTCAAGTTCCAATGTTCATATTGTGGTAAGAAGTTCTACTGCAACACTTATCTAACCAATCACATCCAGGCCGTGCACCTGAAACTCAAAGACAAGGAGTGTGGACATTGCAGTCAGACATTCCACAATTTGGAGCAGCTACGCCGGCATCAGCGAGAGAACCACTCTGGCAAAGTGAAGACCAGGAACAATATATGTCACCTGTGCGGCAAAGCTTTCTTTAAAAAGAAATCATTGAATGAACATATGAACACTCATTTGGGTAAGCGGCCATTTAAGTGCGCGGACTGTGATGCCACATTTGCATACTCCGCAGCTTTGTACAATCACGTCAGGCTGCTTCACTTAAAGTTGAAAAGAGGTAATAAGAACAGTGCCGCTTCAGTAGAGCAGAGTTAA
Protein Sequence: MASATEDLASNPNNSENIRSVLCATCLSVDRVLHPAAALRDLVTVLNDVGLNMNDSICWECRAIMEKFDKFKNQARRSISTLHSLVGNNNIDITDIYNQVRSLSTLEKSTKNNFDAQFRFHIKEEIIEFGHNEQYSVDIEPCQVKKEVFLLPNLQRETVPVEYSNKQLYITIVPMPVPSAGSKLTLPDSPLEKTSQFPSTSIKVSLSECGSSSDDDNHEDNVDEDNEDDDEKARRGSKLNKGKKQSSTFSNTDLFTKILTEDEMLKNREEEREQTGFKNAKHRCMSCIKYFASIHALNKHNLLHCPIQQGQFACSICDLRFISQKAVMIHQQTHYINYYCRYCSYSSYSQQRLMKHWQGRHNPSAKRECKDCGVEFRNLRHLRYHRKKAHSEKPRCVECGKTFAASSSLNRHMLIHKGTIPEVECDICHKKCGGSWGLRAHMRTHDESRGEDAYCTECDIQFKNIHLYQAHLKSNSKHVDRETFKFQCSYCGKKFYCNTYLTNHIQAVHLKLKDKECGHCSQTFHNLEQLRRHQRENHSGKVKTRNNICHLCGKAFFKKKSLNEHMNTHLGKRPFKCADCDATFAYSAALYNHVRLLHLKLKRGNKNSAASVEQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00163579;
90% Identity: iTF_00163579;
80% Identity: -