Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463820.1:10967763-10977039[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.026 6.7 10.1 1.0 3 23 210 231 209 231 0.95

2 18 0.59 1.5e+02 5.8 0.2 1 21 614 634 614 635 0.96

3 18 1.3 3.4e+02 4.8 0.5 3 21 711 729 709 730 0.93

4 18 0.13 34 7.9 0.1 2 23 779 801 778 801 0.96

5 18 0.049 13 9.2 0.9 1 23 807 830 807 830 0.93

6 18 0.15 40 7.7 0.0 1 23 858 881 858 881 0.90

7 18 0.0066 1.7 12.0 3.5 1 23 886 908 886 908 0.97

8 18 2.2 5.7e+02 4.0 0.0 1 23 914 937 914 937 0.96

9 18 0.0037 0.96 12.8 1.2 1 23 950 972 950 972 0.97

10 18 0.00021 0.056 16.7 1.8 1 23 1022 1045 1022 1045 0.97

11 18 0.0043 1.1 12.6 1.8 1 23 1113 1136 1113 1136 0.96

12 18 0.0083 2.2 11.7 1.8 2 23 1184 1206 1183 1206 0.95

13 18 1.6 4.1e+02 4.5 0.0 2 23 1212 1234 1211 1234 0.93

14 18 0.0015 0.39 14.0 0.6 1 23 1315 1337 1315 1337 0.93

15 18 0.00011 0.029 17.6 0.4 2 23 1424 1446 1424 1446 0.93

16 18 1.7e-07 4.5e-05 26.4 1.3 3 23 1453 1473 1452 1473 0.98

17 18 0.2 53 7.3 0.0 1 23 1521 1543 1521 1543 0.98

18 18 0.00012 0.032 17.4 1.8 1 23 1585 1608 1585 1608 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.026	6.7	10.1	1.0	3	23	210	231	209	231	0.95
2	18	0.59	1.5e+02	5.8	0.2	1	21	614	634	614	635	0.96
3	18	1.3	3.4e+02	4.8	0.5	3	21	711	729	709	730	0.93
4	18	0.13	34	7.9	0.1	2	23	779	801	778	801	0.96
5	18	0.049	13	9.2	0.9	1	23	807	830	807	830	0.93
6	18	0.15	40	7.7	0.0	1	23	858	881	858	881	0.90
7	18	0.0066	1.7	12.0	3.5	1	23	886	908	886	908	0.97
8	18	2.2	5.7e+02	4.0	0.0	1	23	914	937	914	937	0.96
9	18	0.0037	0.96	12.8	1.2	1	23	950	972	950	972	0.97
10	18	0.00021	0.056	16.7	1.8	1	23	1022	1045	1022	1045	0.97
11	18	0.0043	1.1	12.6	1.8	1	23	1113	1136	1113	1136	0.96
12	18	0.0083	2.2	11.7	1.8	2	23	1184	1206	1183	1206	0.95
13	18	1.6	4.1e+02	4.5	0.0	2	23	1212	1234	1211	1234	0.93
14	18	0.0015	0.39	14.0	0.6	1	23	1315	1337	1315	1337	0.93
15	18	0.00011	0.029	17.6	0.4	2	23	1424	1446	1424	1446	0.93
16	18	1.7e-07	4.5e-05	26.4	1.3	3	23	1453	1473	1452	1473	0.98
17	18	0.2	53	7.3	0.0	1	23	1521	1543	1521	1543	0.98
18	18	0.00012	0.032	17.4	1.8	1	23	1585	1608	1585	1608	0.97

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATCAGATGGAACCTCCCGTCTTCGTATCAAAAATCAAAGAGTGTGTGTCAGTGCAGATAAACGCGGATGACGGCCTGCCGTCGTGCGTTTGCAGGaaatgtgtggacaatgtgaaCAACTGGCACATTTTTAAGAATGTGTGTGAGAGGTCACAACTCAAACTTCAAACTTTTGTAAAAAAAGATGGCAACCAACTAGAAGAGGTAAAAGTGAAGAGTGAACCCCTCTCTGATGAAGCCTATGATGATGGAGTTGTCATTGACGGCTCTTATCCCAACCATGATCATAATGCCACATCATCCAGCAAAGTGCAACCTGAGGGTCCTCCAATCTTGGCTTCGCTGGGGCTCACACCACGGAGTGATAAGGGCGTGGAGAGTGAAAAGGACTCGGAATCGTGCTCGGAAGAGGCACAGCCAAAGGAGCCACGGCCGCGCTCGGAGAAGCCGCCCAGCATGCCCGAGGTGTCCATCACGGTGATGCGGCCCAGCGGCGAGACGCTGCGCGCGCGCCAAGGTATCGCACAGCTCGCCTCCAAGAACTGCCTCGTGTGCGATCGCGCCTACCGCTACTCGCACAACGCGCGCCGCCACGAGCTCACGGCGCACGGCTTCGACAGGTACACTAACAAGGTCACCCCCACCAAGAAACCGCACCACATGCAGCCCAAGCTGCGCCCCAACCCCTTCAACCCCAAGGCGAGGCTGATGCCCAACCCGAGCAGCCGCAGGATGCAACTGATGCCTAGTGTGAACCCGAACAAGATGATCCCGCACAAGCTCCTCCCAAAGCAGGCAGCCAAGCCGCCGCCATCTAAGTCGCAAGCGAACAGCCTACCCTACCCGCTGCGGATCAAGGCCCTGAAGGACCTGCAGATTAAGAAGAAGGAGCCGCAAATTCTCAAAACCCTGCTCACGTCGAAACCTGAGGTTGTGGTCTCCGAGCCTGAGATCATGAACTCTGGCCCGGAGAGTCCGGAGACGCTGATTTCGGAGCCGGAAATCGCGTCCTTCCCGGTCGAGGCGATACTGTCCGAGCCGGACGGGTATGATCAGGCGCAACGCGAGATGGAGACCGACGGAGACTCGCAGAAGAATAACCACCACGCGTACGACACTGTTGATATGGAGTCCGACCACGAGATCGAAATCGCGAGACATTTAGATGAAGCGCACAACGAGGATAAGGAGGAGGCCGAGGAGGACAGGAGTGACAACGAACACAACGCGGAGGAGAACCATACGTACGGGCAGGAAGCGGGACGCGAGGATGACGATGAACCGGAGGACCACGACGCGGGACAAATGGAGGAGGCCGAACATAAAGCCGAGGAGGAGGTACACGACGACGACAACGAAGAAGGCGGCGACGAATACAAGGACCAAAACCAGGATGACAACGAAGAGGACGAGAACGAGGAGATGCCGCCAATCAGCATCGCGCCCGTCGTCGAGATAAACGAGGGAGACATGCACACCAACTCGTACAACAGCGAGATGAACGAGGACGAGACCAACCAGACCAACGAGGACGAGCTGGATGACGAGGACGCCACCGTCGACGAGCAGACGGCGGGAGAGGATCTCGACCCCAACAAGACGTACATGACGGCAGCGCAGCGGGACTTCATCCTGCAGTACCGCGACATCATCGAGCAAGTCAACACGAAACGCTGCCTCTGCTGCGCCAAGGACTACCCGCGCAGGAAGTCCGTCATCCAGCACCTGCAGAAGAACGGCCACAAGGTCCCGAAACACACCTGCTACAACTGCGTCGTCACCTTCGGACACATCGGCGCCCTGCTCAGCCACATGCGCGCCGACTGCTGCACCAACTTGTGGAAGGTCATCTACGAGGAAGCCGGCATCACCGACGACATGATCGTCGAGGCGGAGCCGCCACCCGACAAGAGCCAATACAAGGACATCCTGAACGCACGCTCGTATGCCTGCAAGCTCTGCCCGGCGAAGTACCAGCTTAAGCAGTTCATCCTCAAGCACGTGCTCGACGTGCACGAGAACGGACAGTCGCAGCTGAACATGGCGTGCGTGCACTGCGGCTCGCGCTTCAAGGAGCGCAACGTGTGGAAGCGGCACGTGCGCAATGGAGAGTGCACCATCTACATCGCGTGCGATCTCTGCGCGGAGAAGTTCGGCAACATGCAGGACTTCAGCAGCCATGCGCTGGCTGCGCATGCCGGCAGCTTCGACCCCGACACGACGACCAAGTGCGTCGACATGCGCCCCACCGTCTGCCCCATCTGCGACGCCAAGAACGCCACCTACCAGAACCTCGTGAAGCACCTCAAGATGATGCACGACGAGGACAAGCCGCACTACTGCCAGAACTGCGACGCCAAGTTCGAGAAGACCGAGGAGCTGAACGAGCACATCTACCAGGCGCACTCTGACATCGCCATGGGTGTCGTGAAGAGCGAGCCGGAGCCGGACATGTCCATAGTGAAGGAGGAGGCGGAGGAGTACCACTACTCGTGCACCGAGTGCAACGCAATCTTTGAGACCGTGGACGCGTGGACCGACCACCAGGTGGCGGAGCATAAGCAGGTGGCGCACCACTGCGACCAGTGCGACAAGAAGTTCCTGCGCCCCTCCGAGCTCGCCGAGCACAAGAACACGCACCTGCGGGTGAAGCTGTACCCGTGCAGCGTGTGCGCCGACAGCTACGGCACGCCGCAGAAACTGGCTGAGCACGTGCAACGCGACCACCCAGGCGCCGGCGACCACGCCGCGCTCGACTCAGAGTTCTTCTGCGAGGCCTGTGTGCGCTCCTTCAAGAGCCGCCAGGCCTACTCTAACCACATGCGCATCCACGCCAAGGTGCCCACCACCAACCGCCGCCCCGGCGACCCGAAGGGCTTCGCGCCGCAGATCATCGGAAAGCCCATCAAGAACTTCCCAATTGTCGGACAGCCCACCAACGTGGTGTTCAAGACGAACAGCATCGTGCCGAACGCGCCTTACTCGTGCGACATTTGCGGGAAAGGGTTTATGCATAAGAAAAACATTTGGAAACACAAGAAGGTCCTGCACGCCGACCTTGTTAACGACAGAAACGACAGCGAGGAGAACACTATGCACGCGTCCACAGAGGAGGACGAATATAACAATACCGGCGGGGACGAAAACGGGAGCATCTTGTCGACGCCACAGTTCGACAGCTTCAATTTCTCTAACTACGCGAACAGCACTCCTCAGAAGAAGACGCCGACGCCTAATCCCAAAATAGGAACATACACGTGCGATCTGTGCTATAAGAAGTTCCCGCTGCGCACGAGTCTATGGAAGCACAAGCGAGCCAAACACGGCATTATCAATGCGAGCACGACCGGCCCGCCCGAGACGCAGACGTTAGCCAGCCAGCTGTTGCACAACCAGAGCCTGCACAACCAGAGCGGCCAAAGCCACAACCAGAGCCAGAGCCAGGGCGGCGACGGCAGCCGCTCCAGTTGCACGCTCTGCAAGATCACCTTCGCCGACAAGAAGTCCTACTACCGCCACCGCAAGAACGTACACAAGTCCACGTCGCAGGTGTGTAAGATTTGCGGCATCCCGCTCGGCTCTACGTTGGAGCTGTATGAGCACCTGCGAGCCGCACACGCGCGCGAGCTGCTTGGCTTCAACGCGAGCCAGGGCCAAGCAGGCGGTGCTGGCAGCAAGCCCACCGAGCTGCAAGTGGAGTACGAGCCCGAGCAGGACGCGAGCGAGGGTAACGGTGGCGACTACCAGGCGCGATTCCCGTGCGACGCGTGCGGCAAGCAGTATCTCGGTCTGCTCGCGCTGCAGAACCACCAGTGCGTAGCGCGCGACCTCTACGCCGACCAGCAGCAGCCTTCCACCTTCGACTGCGAGATCTGCCACAAGAGCTACACGTCCATTGCGGCGCTCAAGAGCCACCGCGGCTGGCACCTGCGCTCGCCGGACGGCAAGGCGGCCGCCAACAACAGCGGCCTGTGGATGCCGCAGCACAAGGTCACCAACAAGGTGAGCAAGCACGAGGTGCTGGAGACGCGCGCGCCGCCCGCCccggccgccgcgccgcccgcgccggcCAAGCGCCGTCTGCCGCCCGAGGTCGAGGTGACCGTCGTCAACCCCAACAAGAAGCTGCGCTCCGACGACTCGCTGGAGGCGGACGCAGGCGCGGTTGGCGCGCTCGACGACCGTTACTGCTCCATTTGCGACAAGGAGTTCACGAAGCGCGCCGCCTTCCAGCGCCACATGGACGAGGTGCACCAGCCCAACTCCGTGTTCTGCCCCGTGTGCGACAAGAGCTTTACGCGCAAGTCCACGCTGCTCGTGCACATGCGCAAGCACTACGAGGGCAGCGGCGGCGAGGCGGGCTCGTCGGCGAGCGGACACCACGACGAGCAGCGCCGGCGGTACCGTGGGGAcagcgacgacgacgacgacgacgaggGTGACGACATGGCGGCGGCGGTGACGGCGCCGGGCGAGTTCACGTGCGGCCAGTGCGGTGACGGCGTGGCGACGCCGCGCGAGCTGCTGGCGCACCGCAGTATGCACGCCACGCCCAGCAAGCACTACTGCGCCGCGTGCAAGGTGTACTGGGCGCGAGCGAGCGAGCTGACGGAGCACGCGCGCGCTCGGCACGGCGAGGCGGCGTCGCGCGACCGCGACCAGCCCTGCTACCCGTGCGCCATGTGCGACTGCTCCTACACCAAGAAGAAGAGCCTGCAGAGGCACATCGAGACGGTACACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDQMEPPVFVSKIKECVSVQINADDGLPSCVCRKCVDNVNNWHIFKNVCERSQLKLQTFVKKDGNQLEEVKVKSEPLSDEAYDDGVVIDGSYPNHDHNATSSSKVQPEGPPILASLGLTPRSDKGVESEKDSESCSEEAQPKEPRPRSEKPPSMPEVSITVMRPSGETLRARQGIAQLASKNCLVCDRAYRYSHNARRHELTAHGFDRYTNKVTPTKKPHHMQPKLRPNPFNPKARLMPNPSSRRMQLMPSVNPNKMIPHKLLPKQAAKPPPSKSQANSLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVVVSEPEIMNSGPESPETLISEPEIASFPVEAILSEPDGYDQAQREMETDGDSQKNNHHAYDTVDMESDHEIEIARHLDEAHNEDKEEAEEDRSDNEHNAEENHTYGQEAGREDDDEPEDHDAGQMEEAEHKAEEEVHDDDNEEGGDEYKDQNQDDNEEDENEEMPPISIAPVVEINEGDMHTNSYNSEMNEDETNQTNEDELDDEDATVDEQTAGEDLDPNKTYMTAAQRDFILQYRDIIEQVNTKRCLCCAKDYPRRKSVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRADCCTNLWKVIYEEAGITDDMIVEAEPPPDKSQYKDILNARSYACKLCPAKYQLKQFILKHVLDVHENGQSQLNMACVHCGSRFKERNVWKRHVRNGECTIYIACDLCAEKFGNMQDFSSHALAAHAGSFDPDTTTKCVDMRPTVCPICDAKNATYQNLVKHLKMMHDEDKPHYCQNCDAKFEKTEELNEHIYQAHSDIAMGVVKSEPEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHKQVAHHCDQCDKKFLRPSELAEHKNTHLRVKLYPCSVCADSYGTPQKLAEHVQRDHPGAGDHAALDSEFFCEACVRSFKSRQAYSNHMRIHAKVPTTNRRPGDPKGFAPQIIGKPIKNFPIVGQPTNVVFKTNSIVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMHASTEEDEYNNTGGDENGSILSTPQFDSFNFSNYANSTPQKKTPTPNPKIGTYTCDLCYKKFPLRTSLWKHKRAKHGIINASTTGPPETQTLASQLLHNQSLHNQSGQSHNQSQSQGGDGSRSSCTLCKITFADKKSYYRHRKNVHKSTSQVCKICGIPLGSTLELYEHLRAAHARELLGFNASQGQAGGAGSKPTELQVEYEPEQDASEGNGGDYQARFPCDACGKQYLGLLALQNHQCVARDLYADQQQPSTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVLETRAPPAPAAAPPAPAKRRLPPEVEVTVVNPNKKLRSDDSLEADAGAVGALDDRYCSICDKEFTKRAAFQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMRKHYEGSGGEAGSSASGHHDEQRRRYRGDSDDDDDDEGDDMAAAVTAPGEFTCGQCGDGVATPRELLAHRSMHATPSKHYCAACKVYWARASELTEHARARHGEAASRDRDQPCYPCAMCDCSYTKKKSLQRHIETVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -