Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463811.1:4379513-4381732[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.3 8.5e+02 3.5 0.6 3 23 53 72 51 72 0.83

2 16 0.11 30 8.1 0.1 2 23 100 122 99 122 0.90

3 16 0.0029 0.76 13.1 0.6 2 23 143 165 142 165 0.96

4 16 3.3e-06 0.00087 22.3 2.9 1 23 170 193 170 193 0.97

5 16 0.0019 0.5 13.7 0.5 1 21 198 218 198 221 0.90

6 16 0.057 15 9.0 3.4 1 23 223 246 223 246 0.96

7 16 0.11 28 8.2 1.7 2 21 255 274 254 275 0.92

8 16 0.00058 0.15 15.3 0.5 1 23 323 346 323 346 0.94

9 16 0.46 1.2e+02 6.2 0.0 2 23 374 396 373 396 0.95

10 16 0.033 8.7 9.8 0.7 1 23 418 443 418 443 0.97

11 16 0.00031 0.082 16.1 2.8 3 23 450 470 448 471 0.93

12 16 0.0054 1.4 12.3 0.6 1 23 476 499 476 499 0.96

13 16 0.0019 0.51 13.6 0.1 2 23 505 527 504 527 0.94

14 16 8.5e-05 0.022 17.9 4.3 2 23 532 554 532 554 0.97

15 16 0.00055 0.14 15.4 0.4 2 23 561 582 560 582 0.96

16 16 0.023 6 10.3 1.6 1 23 588 610 588 610 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.3	8.5e+02	3.5	0.6	3	23	53	72	51	72	0.83
2	16	0.11	30	8.1	0.1	2	23	100	122	99	122	0.90
3	16	0.0029	0.76	13.1	0.6	2	23	143	165	142	165	0.96
4	16	3.3e-06	0.00087	22.3	2.9	1	23	170	193	170	193	0.97
5	16	0.0019	0.5	13.7	0.5	1	21	198	218	198	221	0.90
6	16	0.057	15	9.0	3.4	1	23	223	246	223	246	0.96
7	16	0.11	28	8.2	1.7	2	21	255	274	254	275	0.92
8	16	0.00058	0.15	15.3	0.5	1	23	323	346	323	346	0.94
9	16	0.46	1.2e+02	6.2	0.0	2	23	374	396	373	396	0.95
10	16	0.033	8.7	9.8	0.7	1	23	418	443	418	443	0.97
11	16	0.00031	0.082	16.1	2.8	3	23	450	470	448	471	0.93
12	16	0.0054	1.4	12.3	0.6	1	23	476	499	476	499	0.96
13	16	0.0019	0.51	13.6	0.1	2	23	505	527	504	527	0.94
14	16	8.5e-05	0.022	17.9	4.3	2	23	532	554	532	554	0.97
15	16	0.00055	0.14	15.4	0.4	2	23	561	582	560	582	0.96
16	16	0.023	6	10.3	1.6	1	23	588	610	588	610	0.96

Sequence Information

Coding Sequence: ATGATAAACGTCGATCCTGTTAAAATGTACCCTAATGAAGTACCGAAAGCGAAACGAAAGCACAGCGATAACCCCTCGATAAAGCGGCGCAAGAATCTGGAGCTATTATTCAACAACACAAGCGTAATACCGTTTAAATGGCGAGGGAAATACCTCTGTTATTATTGCGTACAGGAAGTGGAATATAGCGAACTTAGGAAGCATACCCAATCCCACGGAAACTGCTCTGTGAAAGACTTCGCCATCAAACAAGTGAAAGCGGGCGATAGAGAAATCAAACTCGATATTTCTGAGCTTACGTGCGAAATCTGTAGCGAACAGTTTCCAACTCTAGACGAAATTATTATGCATTTGATATTTAAACACAAATTGGACTACGATAGGGATGTAGATATATTGTTGTCTACATACAGACTGTCAGATCTTACCTGTACACTCTGCGGCGAGTCTTTCGATATATTTAAGAGCTACATCAATCACATGAACAAGAACCATCCCCAGAACTCATACGTATGCGACAAATGCTCGAAAACTTTCAACAAGAAACGCGACTTAAAGATTCATATGAGGAATTTCCACAAAGACGGCGGCTATAAGTGTGACGATTGCGACGAGGAGTTCCATTCCAATTGGAAACTCATAGCACACAACGAAGCTAAACACTTCCATACCTGCAATGTTTGCTACAGAAAGTTCTCATCGTCGCTGAAGAAACTAAAGCACATAGAGACAGAACACATACATTTATCTTCCGGTCCTTTACAATGTGCCTTTTGCAATAAGTCGTGTAATACAAAACCCTCTTTCTTACTTCACGTAAACAAATGCGCCGGTCCCGCGTTCGCAGAGGAGGAGGTGCCGGCGAAACCCGTCGCCATGGAGTACAAAGTGAAGAAAATAAGGAACAATCTCGCGTGCATTGTGAACATGTCCACAGCGATGCCGTTCAAATACTTCATGAACCGATTCCGCTGCTTCTACTGCCCCAAAGACTTCGTCGAGTCCGACACCTTGAAAGAACACACGGTAATGGAGCATCCAGTGTGTGACGTCAAACATAGAAGCATGCGTTTGAGAGGCCTGCACAACATCTACATCAAATTAGACCTCACCAATCTAACCTGCAAAGTTTGCTACGAACCTATAGCTGATCTTGATACTTTAGTCAGCCATCTAGTGACGGAGCACAAAGCGGCTTACGATAAGACTGTAGACAACCGGATACAGCCGTTCCGACTCGTCAAGGATTGCTATCCGTGCCCGCATTGTCCCCAAAAAGAGCCGTTCAGGTACTTCGGTCAGGTGCTAAAACATATGAACAAGGTCCATTCCAACAATAACCTCATTTGCGTCTTCTGCGGCACCGCTTTCAGGACCGACTCCCACCTGCGCTCCCACATATCTCGGCACCACAAGCAGGAGGGCCACAAATGTACCGATTGCGACATGGAGTTCCCTTCCAAGCTGCGTTGGATCACCCACATGGCCAAAGCCCATGGCACGAACTTGGTCAAATGCCCCGACTGTCCAGAGAAATTCCCGAGTACCTACGAAAGgcaaaagcatttgatacaaGCCCATAACTCGGGCGCGACTTGCAAGTATTGCGGTAGAATGTTCACAAGGAACTCGTTTATGCACGACCACATTCGAAGGACTCATCTTAGGGAGAAGAAAGTGGAATGCACTATATGCAACATGCGATTTTTCGACAATGTCATGTTGAAGATGCACATGGTGAAACATGTGGGAGACAGGAACTTTCACTGTGACGTTTGTGGCAAAAAGTTCTTGTGGAAAAAGAATCTTAGAGGGCATATGGCGTCGCACGACAAGCACGGGAACACTCAACATCTCGAAATACTTCCTCTCAACGTTTAA
Protein Sequence: MINVDPVKMYPNEVPKAKRKHSDNPSIKRRKNLELLFNNTSVIPFKWRGKYLCYYCVQEVEYSELRKHTQSHGNCSVKDFAIKQVKAGDREIKLDISELTCEICSEQFPTLDEIIMHLIFKHKLDYDRDVDILLSTYRLSDLTCTLCGESFDIFKSYINHMNKNHPQNSYVCDKCSKTFNKKRDLKIHMRNFHKDGGYKCDDCDEEFHSNWKLIAHNEAKHFHTCNVCYRKFSSSLKKLKHIETEHIHLSSGPLQCAFCNKSCNTKPSFLLHVNKCAGPAFAEEEVPAKPVAMEYKVKKIRNNLACIVNMSTAMPFKYFMNRFRCFYCPKDFVESDTLKEHTVMEHPVCDVKHRSMRLRGLHNIYIKLDLTNLTCKVCYEPIADLDTLVSHLVTEHKAAYDKTVDNRIQPFRLVKDCYPCPHCPQKEPFRYFGQVLKHMNKVHSNNNLICVFCGTAFRTDSHLRSHISRHHKQEGHKCTDCDMEFPSKLRWITHMAKAHGTNLVKCPDCPEKFPSTYERQKHLIQAHNSGATCKYCGRMFTRNSFMHDHIRRTHLREKKVECTICNMRFFDNVMLKMHMVKHVGDRNFHCDVCGKKFLWKKNLRGHMASHDKHGNTQHLEILPLNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00161779;
90% Identity: iTF_00161779;
80% Identity: -