Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463811.1:4951576-4953444[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0083 2.2 11.7 1.1 1 23 43 65 43 65 0.98

2 16 0.18 47 7.5 0.3 2 21 93 112 92 115 0.87

3 16 0.00099 0.26 14.6 1.1 2 23 136 158 135 158 0.96

4 16 9.5e-05 0.025 17.8 0.6 2 23 164 186 163 187 0.95

5 16 0.00062 0.16 15.2 0.7 1 23 191 213 191 213 0.98

6 16 0.22 57 7.2 1.2 2 23 216 238 215 238 0.94

7 16 0.34 90 6.6 4.7 2 19 245 262 244 264 0.94

8 16 0.0074 1.9 11.8 0.2 1 23 320 343 320 343 0.94

9 16 0.96 2.5e+02 5.2 0.1 2 23 371 393 370 393 0.89

10 16 0.02 5.1 10.5 0.5 1 23 415 440 415 440 0.95

11 16 6.3e-05 0.017 18.3 0.7 2 23 446 467 445 468 0.93

12 16 0.0011 0.29 14.4 1.0 1 23 473 496 473 496 0.97

13 16 0.0026 0.69 13.2 0.4 2 23 502 524 501 524 0.95

14 16 1.5e-05 0.0039 20.3 1.6 3 23 530 551 529 551 0.97

15 16 0.0023 0.59 13.4 0.7 2 23 558 579 557 579 0.97

16 16 0.00099 0.26 14.6 0.8 1 23 585 607 585 607 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0083	2.2	11.7	1.1	1	23	43	65	43	65	0.98
2	16	0.18	47	7.5	0.3	2	21	93	112	92	115	0.87
3	16	0.00099	0.26	14.6	1.1	2	23	136	158	135	158	0.96
4	16	9.5e-05	0.025	17.8	0.6	2	23	164	186	163	187	0.95
5	16	0.00062	0.16	15.2	0.7	1	23	191	213	191	213	0.98
6	16	0.22	57	7.2	1.2	2	23	216	238	215	238	0.94
7	16	0.34	90	6.6	4.7	2	19	245	262	244	264	0.94
8	16	0.0074	1.9	11.8	0.2	1	23	320	343	320	343	0.94
9	16	0.96	2.5e+02	5.2	0.1	2	23	371	393	370	393	0.89
10	16	0.02	5.1	10.5	0.5	1	23	415	440	415	440	0.95
11	16	6.3e-05	0.017	18.3	0.7	2	23	446	467	445	468	0.93
12	16	0.0011	0.29	14.4	1.0	1	23	473	496	473	496	0.97
13	16	0.0026	0.69	13.2	0.4	2	23	502	524	501	524	0.95
14	16	1.5e-05	0.0039	20.3	1.6	3	23	530	551	529	551	0.97
15	16	0.0023	0.59	13.4	0.7	2	23	558	579	557	579	0.97
16	16	0.00099	0.26	14.6	0.8	1	23	585	607	585	607	0.97

Sequence Information

Coding Sequence: ATGACAAAAGAGCGTAATTATTTTTCAGATGAAGACACAAAACGCCTACCTACCCGCCTGCGCCGCTCCAACCTTCGGACGCTCCTCAATAACAGCTCCGTGCTGCCCTTCAAATGGAGGGGGAAATATATGTGTTTCTACTGCGGCTGCGACGTACCGGGCTACAGCGACCTGGTGAAGCACACCAGGTCGCACGGGCCTTGTGCGGACAGAGACTTTGCCATCAAAGCAGTGAGGACGGCCGATTGTGAAGTGAAGCTAGACGTCTCTCATTTGAGCTGCGAGCATTGCAGCGAAGAGTTTGCTCGCGTGAGTGAGATAATCATGCATTTGGTATTCAAGCATAATATCCAATACGATAGAGACGTTGAGATGTGCTTGACTGAGTATAAGTTGATTGACTTATCGTGCCTGGAGTGCGGGGAGGCGTTTAAGTTTTTCAAGCATTTAGTGCAGCACGTGAACACAAGCCATCCGAAGAATGTATTAGTGTGTGAGGTGTGCTCGCAAAGTTTTAACAAGAAAGCGGACTTGTTGGCGCACATAAGAAACTATCATCATAAGGATGGATACAAGTGTGAGGACTGTCAAATAGAGTTTACGTCTGGGACGAAGTTACGAGCTCACAAGGAAAGACATTTGCAGACGTGTAATGTGTGTTTCGAGAAGTTTACGTCGACGGCCCGAAAGATGAAACATATTAATAATGTTCATCTCAACCAGGGGATATTACAGTGCGGGTTCTGTTCTAAATCTTGCAGTACGAAACACTCGTTTCTGCAACACTCGAGTCTGTGCAAAGAGAAGAAAAAGGCCAAGGAAAAGTACCCCAGTAACACCATAACCGTTGACGCCGATTTGGAGGACAAGAAACCTACTGTGAAAGAGTTAAGGAACAATCTTGCTTGTTTATTCAACATGTCGACAGCGTTACCTTTTAAGTATGTTATGAATCGCTTCAGATGTTATTATTGTCCAAACGATTTCGTGGACCCGAACTTGTTGAGAGACCACACAATCTTGGAGCATCCTGTGTGTGACACCAAGCATAAAAGCATGAAGTTAAGAGCCAGAGACTTTGCTGATATAAAAATTGACATATCGACTCTGAACTGCAAGGTTTGCTTCCAGGAACTGAACAGTTTGGAGCAACTGATCGATCATTTGGTGTTGGAACACAAGGCGGTGTATAACAGGAACGTGGATTGTCGTATAATGCCCTTCAAAATTGTCAAAGATAGCTACGTGTGCCCTCTCTGTCATCAAGGCGAAATATTCAGATTTTTCGGCAACCTGCTGAAGCATATGAACGATGAGCACTCAAACAACAAACTTATCTGTGTGTACTGCGGCAAGCCCTTCAGAGCCGCGCCCAATCTCAGACACCACATCGCACGCCATCACAAGGAAGCCAGTCATAAATGTACAGAATGCAATCAGCTGTACACCACGCTAGTTCTCTTGAACTCGCACATGGCCAAAGCACATGGGAAACAGATCTCAAAGTGCCCTAAATGTCCCGAAAGATTTGTCAGCACGTACCTCAGGCAGAAACATTTGATCTCTGCACACAACTCCGGATCCGCCTGTCCGCACTGCGGCAGGCTGTTCACGAGAAACTCTCTAATGCGAATACACATAAGGCGCACACATTTGAAGGAGAAAAAAGTGGAGTGTCCAGTCTGTCGCACGAAGTTCTTCGACAATTTCATGATGAAAAAGCATTTGGCCACACACGGCGGCGATAGGAACTTTAATTGCGACGTGTGTGGTAAAAAGTTTCTGTGGAAAACCAACTTGAGGAATCACATGGCGACGCATAATAAGCATAGGGGAGGTAATGCTGAGATGGCTGACCCTAGAGTTTGA
Protein Sequence: MTKERNYFSDEDTKRLPTRLRRSNLRTLLNNSSVLPFKWRGKYMCFYCGCDVPGYSDLVKHTRSHGPCADRDFAIKAVRTADCEVKLDVSHLSCEHCSEEFARVSEIIMHLVFKHNIQYDRDVEMCLTEYKLIDLSCLECGEAFKFFKHLVQHVNTSHPKNVLVCEVCSQSFNKKADLLAHIRNYHHKDGYKCEDCQIEFTSGTKLRAHKERHLQTCNVCFEKFTSTARKMKHINNVHLNQGILQCGFCSKSCSTKHSFLQHSSLCKEKKKAKEKYPSNTITVDADLEDKKPTVKELRNNLACLFNMSTALPFKYVMNRFRCYYCPNDFVDPNLLRDHTILEHPVCDTKHKSMKLRARDFADIKIDISTLNCKVCFQELNSLEQLIDHLVLEHKAVYNRNVDCRIMPFKIVKDSYVCPLCHQGEIFRFFGNLLKHMNDEHSNNKLICVYCGKPFRAAPNLRHHIARHHKEASHKCTECNQLYTTLVLLNSHMAKAHGKQISKCPKCPERFVSTYLRQKHLISAHNSGSACPHCGRLFTRNSLMRIHIRRTHLKEKKVECPVCRTKFFDNFMMKKHLATHGGDRNFNCDVCGKKFLWKTNLRNHMATHNKHRGGNAEMADPRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00161778;
90% Identity: iTF_00161778;
80% Identity: -