Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463811.1:5339389-5352757[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0053 1.4 12.3 0.8 2 23 168 190 167 190 0.96

2 29 0.047 12 9.3 0.3 3 20 202 219 201 221 0.94

3 29 0.34 89 6.6 0.2 8 23 238 254 230 254 0.89

4 29 0.81 2.1e+02 5.4 1.4 1 23 392 415 392 415 0.92

5 29 0.033 8.6 9.8 0.6 1 20 533 552 533 554 0.95

6 29 0.75 2e+02 5.5 0.1 2 23 582 604 581 604 0.93

7 29 4.5 1.2e+03 3.1 2.5 1 23 627 649 627 649 0.96

8 29 5.5e-05 0.014 18.5 0.2 1 23 653 675 653 675 0.99

9 29 0.0074 1.9 11.8 1.1 1 23 680 703 680 703 0.93

10 29 1.4 3.7e+02 4.6 0.1 2 23 711 733 710 733 0.89

11 29 0.001 0.26 14.6 5.2 1 23 740 762 740 763 0.95

12 29 0.053 14 9.1 0.5 1 23 769 791 769 791 0.97

13 29 7.4e-07 0.00019 24.4 1.6 1 23 797 819 797 819 0.98

14 29 5.2e-06 0.0014 21.8 0.4 1 23 826 848 826 848 0.98

15 29 0.032 8.3 9.8 1.1 1 23 981 1005 981 1005 0.95

16 29 6.4 1.7e+03 2.6 3.2 2 23 1032 1054 1031 1054 0.95

17 29 0.003 0.78 13.1 2.1 2 23 1077 1098 1076 1098 0.97

18 29 0.0076 2 11.8 0.2 1 23 1102 1124 1102 1124 0.97

19 29 0.32 84 6.7 0.6 1 23 1131 1154 1131 1154 0.86

20 29 0.065 17 8.9 0.8 3 23 1163 1184 1162 1184 0.94

21 29 0.00038 0.099 15.9 1.7 1 23 1189 1212 1189 1212 0.97

22 29 0.0061 1.6 12.1 3.2 1 22 1218 1239 1218 1239 0.96

23 29 0.72 1.9e+02 5.6 0.5 1 23 1257 1281 1257 1281 0.94

24 29 4.6 1.2e+03 3.0 2.2 2 23 1307 1329 1306 1329 0.93

25 29 0.023 5.9 10.3 0.4 2 23 1352 1373 1351 1373 0.96

26 29 0.00064 0.17 15.2 0.2 1 23 1377 1399 1377 1399 0.98

27 29 0.00034 0.09 16.0 1.9 2 23 1466 1488 1465 1488 0.97

28 29 0.11 30 8.1 0.2 3 23 1496 1516 1494 1516 0.97

29 29 0.0085 2.2 11.6 3.5 2 23 1523 1545 1522 1545 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0053	1.4	12.3	0.8	2	23	168	190	167	190	0.96
2	29	0.047	12	9.3	0.3	3	20	202	219	201	221	0.94
3	29	0.34	89	6.6	0.2	8	23	238	254	230	254	0.89
4	29	0.81	2.1e+02	5.4	1.4	1	23	392	415	392	415	0.92
5	29	0.033	8.6	9.8	0.6	1	20	533	552	533	554	0.95
6	29	0.75	2e+02	5.5	0.1	2	23	582	604	581	604	0.93
7	29	4.5	1.2e+03	3.1	2.5	1	23	627	649	627	649	0.96
8	29	5.5e-05	0.014	18.5	0.2	1	23	653	675	653	675	0.99
9	29	0.0074	1.9	11.8	1.1	1	23	680	703	680	703	0.93
10	29	1.4	3.7e+02	4.6	0.1	2	23	711	733	710	733	0.89
11	29	0.001	0.26	14.6	5.2	1	23	740	762	740	763	0.95
12	29	0.053	14	9.1	0.5	1	23	769	791	769	791	0.97
13	29	7.4e-07	0.00019	24.4	1.6	1	23	797	819	797	819	0.98
14	29	5.2e-06	0.0014	21.8	0.4	1	23	826	848	826	848	0.98
15	29	0.032	8.3	9.8	1.1	1	23	981	1005	981	1005	0.95
16	29	6.4	1.7e+03	2.6	3.2	2	23	1032	1054	1031	1054	0.95
17	29	0.003	0.78	13.1	2.1	2	23	1077	1098	1076	1098	0.97
18	29	0.0076	2	11.8	0.2	1	23	1102	1124	1102	1124	0.97
19	29	0.32	84	6.7	0.6	1	23	1131	1154	1131	1154	0.86
20	29	0.065	17	8.9	0.8	3	23	1163	1184	1162	1184	0.94
21	29	0.00038	0.099	15.9	1.7	1	23	1189	1212	1189	1212	0.97
22	29	0.0061	1.6	12.1	3.2	1	22	1218	1239	1218	1239	0.96
23	29	0.72	1.9e+02	5.6	0.5	1	23	1257	1281	1257	1281	0.94
24	29	4.6	1.2e+03	3.0	2.2	2	23	1307	1329	1306	1329	0.93
25	29	0.023	5.9	10.3	0.4	2	23	1352	1373	1351	1373	0.96
26	29	0.00064	0.17	15.2	0.2	1	23	1377	1399	1377	1399	0.98
27	29	0.00034	0.09	16.0	1.9	2	23	1466	1488	1465	1488	0.97
28	29	0.11	30	8.1	0.2	3	23	1496	1516	1494	1516	0.97
29	29	0.0085	2.2	11.6	3.5	2	23	1523	1545	1522	1545	0.96

Sequence Information

Coding Sequence: ATGGACACTCTAATGATAGGCGGCATCTGCCGATGCTGCGCCTCTGAGGGGCCGTCGAAAGACCTCACTAGTAGATATAGCTGGATGGGCGATGAAGAAATATATTCCAAAATGCTGCTGGATTGCTTTGATATTTCGTTGTACGTGGACAATGAGGGCAACAACGGCGGGATATGCGAGGTGTGCATCACGCAGCTGAGAAATGCGTTCCAGTTCAAGAAGCAAGTGCAACTCACGGAAGACAAATTTAAAAAGACCATTAGATGCGGCACTGTTACTGCCATTAAACTGGAGGTGGTAAGGGAGGACTGCTCGGACAGCGAGCAAGACATGCAAGAGGAACATCTTGATGACAACTCTGCAACAGAGGACTTTGAAGTACCAATCAAAAGGGAATCCTCCGAGGAGGTAGAAGAGGTGGTACCTAAGAAGCGTCCGCGACCCAGCACCTCTAAGGCTGCACTCAAAGCGGAGCCAAACTCCTCACAGGACCACGGCCTAAGTTGTCCGTTATGCTCGTATCGCTCCTCAAGAACGTTCAACCTCATGCGGCACCTAGCCACTACACACGGCACTCGTCTGAACATCACCAAAAAGGTTTTATGCCACTCTTGCGGCAAGATTTTCAGCAACACCAACCGCCTGGCCACACATTTGGCCGTCGGTTGCGCCAAAAACCTCATGGTCAACTGCACCGAATGCATTACCCCAATCGCGTTTGAGCGTAGGTCGGACTTTCTCACACATATGCGCAGACTGCATTGGGCCGCTAGTCGACTGTTGAAGTGCCATTGTCCATTGTGCGATGAATCGTTTAGATGCCACAAGGAACATGACAGTCACCTGTTTAAAGTGCATAATGTTGAGTTGGACTATCAGGAGATAACATTCGATTCGGAGGCTGATTTGCAAGCGTGGATAGCAGACAAGGAATTGAAGGAAGGCGCTtgctacctaaaacgtctatcAAGCGACGATAGAGAATATTTCCACTGCTATCCGGAATCGTTTTTAGGTCATGTCAAAGCCCCTAGTAGCAAATTGACTTGCCCTGCTAGAATTGAAGTCAAACATGCCTCAGAGTTGTGGATGGTAACACACCAAACAAAACATCTATGCCACATGCAAACTGCAGGACAAACTGGGCCATGTAAGAAAAAATCAAAGACCACATTCATTTGTCCGATCTGCGAAATCAGTTTGAACAGTAACGAAGAGTTGTGTTGTCACATCAGCTATTCGCACGACATTAATGTTGATTTACAGCATTTGACATTTAACTGCCATGGCGACTTCCTAACCTGGAAACATAACCTGGAGAACGACGAAAAAGTCACATTCTACAAACGTTCTTCAATGGTAACCACCAAAAAAGGCGTAAAAAGTAACAAGAGCTACTATTTCTGCTCTAGGTCTGGACCAATCAGAGCTCTAAATAAAACACGCAGCGCGGGGGACGGCCGCGGGCCGAAATCAAAGAAAAAGCGAAAGACCTACGATAGCGCGACGCCAGAGAGAACGGAGCACAGGGTCAACCTCACAACCATCCTGCAGTGCTCCACAGCCAGCCCCTTCAGAGACAAGACGGCCAAAGGCTTCTCCTGTCTCTACTGCGCCAAGTACTTCAAACACATCGACGAACTTCGCGCCCACACCGCCCAACAGGCCGAGAAGGACAAAATCAATTCGATGATAGACTACAAACTCAGCTATAACCCCATCAAGGTCGACATCACCGACCTAAAATGCACCCTCTGTAACACAGCCATGAAAGACTTGAACGCACTGAAGGACCATTTAGTCAGCGTCCACAAAAGAACTATAAATAGAGAGATCAAAGATATTATTCTACCGTTTAGGCTAAACAACGGGACAGATTACAAATGTCTCATCTGCTCCGTCGTTCACATGTCTTTCAAGAATCTGTACCAGCACATGAGCAGCCATTACAGGAACTATTACTGCAATAAGTGCGGCGTTGGGTACATAACGATAGCCGCGTTGCGGAAGCACATGAAAACCCACGAAGAGGGATGCTTTCCGTGCGAGTATTGCGACAAAATCTACTCGTCCAAGACGAAAAAGCGTAACCACGAAAAGGGTGTCCACAAGGGCAGCTGGCTGAGGAACAAATGCCCTCAGTGCCCGGAGATCTTCGTCGGGTACTACGACAGGTTGGACCACCTCGTTCGGGTGCACAACGAGACGCCCATCAGCTATCCCTGCAACGCGTGCAATAAGGTCTACAAGAAAAAATTCGAGCTCAACCGCCACATCAAACACCACCATTTACAGCAGAAGAGCTTCATGTGCGACTCGTGCAATGCCAAGTTCTTCTCCAAGCGCGGACTAGTCGACCACCTAGCGAGGCACATGGGGGTGAACGGTTTCACGTGCGACACCTGCGGCAAAGTGTTCTCTCGTTTCCGAACGTTGCGCGACCACATGCGGATTCACGAGGAGGACCAGGCGAGATACCAGTGCGAGGTCTGCAAGCGGGCGTTCTCTCAGAAGGCGGGCCTCAGAAACCATGTTCGACTGCACCAGGACGACATGGATATATTCAAGGAGTTCGATGACGTGAAGCATCTGATCGACAACCGCGATCTGACGCTGAAACAGATTGCGGCTGAGaacaagaagaaggcgacggcagAACTCTTGAGAGTTGGCGACGACGTTGGACATAGGCTCGTCGCAAGGAGAAGGGGCGCCTCTGAGCAAGAGAAAACGGATGATGATTTTCCGGAAAAGGTCGTCTGCaggaagaagaaaaagataCCCAAAAAGTACGttccacaaataattataccgATTGTGGACAAGACAAACTCTAATAGGCCACAGCACCATTCAGAGCAATCAAAAGTCTCGCACAACCTCAAAACTATACTCAAGTGCTCGAATGCAACACCTTTCAAGAACAAAAACGCATTTGGCTACGTTTGCGCGTATTGCAACTACACGACATTCGAAGACCCTCAAGAATTGAGGAGACACACTCATTCAGCCCATGCCAAGCATCGGTTAGCCTTCTACGCCGATCAAcgttataaaaacaataacgtCATTCTCTTAGATATTGTCGACTTGAAGTGTACTTTATGCTTTAACAATTACCACAATATCAAAGAACTGAGAGATCATTTGATGAAAAAGCATGATGCTTTCTTTTACACTGATGTCAATGATTATATCCAGCCTTTCAAACTCACAAAGGCAAAGTCGCAATGTTGCCTATGCCCCCAGGAGTTCAGCAACTTTAAGCAACTATTCGCTCACATGAACGAGCACTTTAGGAACTATATTTGCTCCACCTGTGGCGCAGGTTTTGTTAACAAACTTCGCCTCAAAAATCATCTATTGTTGCATAGCACAACCAAGCAGACCTTCAAATGTGGTAATTGTGACCAAGTGTTCGACAATGAAACCAGGAGAAAGGACCACAACGCTACCGTGCATCGGGCACTTGCCGGCGTGAATATCTGCCAAATCTGCAATGAGCGGTTCATAACTTACTACAGAAAACAGCGGCACATGATTGAGAAGCACAATTCGGAAGCCTACAAATGTGATCGCTGCGACAAAAGTTACACGTTGATAACTACTCTGAGGAAGCATCTGCGCCAGGTTCACATGAAGGAGCGCACGCACGAGTGCGAAGTTTGCAAGCGCAAGTTTTTCCAGAAGCATCGTCTGCTGATCCACATGAGGACCATACTCCAGTACTCAAACGCTACACCGTTCAAGAGCAAGAACGTTCTGGGCTATGATTGCGCGTATTGCAATGACGTGACATTTGGCGACCCGCAAGGCTTGAGGCGCCACACACACTCCCTCCACACCAAGGACCGCTTAGACTATTACTCCGAGTCAACTAATAAAAATTACGTTCTCTTTGTGGACATTCTCGAACTGATATGCACGGTATGCTTCACCCACTGCGATGACATCAAGGATCTGCAGGATCACGTGATAAAGAAGCATGACGCTCCTTTTTACACTGATATCAACGATTATATCCAGCCTTTCAAACTAACAACAGACAAGTCGCCGTGTTGTCTTTGCCCCGAGGTGTTTGAGAAATTCCAACAACTTGTACTACACATGAACATCCACTACCCTAATTTTGTGTGCCCCTCGTGCGGCGCGGGTTTCGTCAACAAGTACCGCTTGAAACAACACGAGCTGACCCACGTTTCAAAGCCAGCGTACAAATGCATTCAATGCGAACTGGTATTTGACAATCCTGGCAGGAGAAGAGACCACAATGCAACAGTTCATTTTGCACGTTCAGGTGTTCACATCTGCCATTTCGACAATTGCGTGAAACGGTTTCCTACCTACTACAGGAAGCAACAGCACTTGATCGAAGTTCACAAGTTCACGGCAAATAAGTGTGATCGATGTAGTAAGAGCTACACATTGAAAACGGCGTTGAGAAAGCATATTCGGCGGGTCCACATGAATGAACGGGCTTACGGGTGCGAAGTTTGCGGTGTCAAATTCTTCGAGCAATTCCGTCTGCTGCAACACATGGATATTCATAAGCCTCAGAAAGATATTCAGTGCGAAATATGTAACAAAATGTTCAAAAACTTGCAATATTTGAGGTGCCATGTTAGAAAGTTCCACGGAAAAAAGTCGGATGGTTTTGACTAG
Protein Sequence: MDTLMIGGICRCCASEGPSKDLTSRYSWMGDEEIYSKMLLDCFDISLYVDNEGNNGGICEVCITQLRNAFQFKKQVQLTEDKFKKTIRCGTVTAIKLEVVREDCSDSEQDMQEEHLDDNSATEDFEVPIKRESSEEVEEVVPKKRPRPSTSKAALKAEPNSSQDHGLSCPLCSYRSSRTFNLMRHLATTHGTRLNITKKVLCHSCGKIFSNTNRLATHLAVGCAKNLMVNCTECITPIAFERRSDFLTHMRRLHWAASRLLKCHCPLCDESFRCHKEHDSHLFKVHNVELDYQEITFDSEADLQAWIADKELKEGACYLKRLSSDDREYFHCYPESFLGHVKAPSSKLTCPARIEVKHASELWMVTHQTKHLCHMQTAGQTGPCKKKSKTTFICPICEISLNSNEELCCHISYSHDINVDLQHLTFNCHGDFLTWKHNLENDEKVTFYKRSSMVTTKKGVKSNKSYYFCSRSGPIRALNKTRSAGDGRGPKSKKKRKTYDSATPERTEHRVNLTTILQCSTASPFRDKTAKGFSCLYCAKYFKHIDELRAHTAQQAEKDKINSMIDYKLSYNPIKVDITDLKCTLCNTAMKDLNALKDHLVSVHKRTINREIKDIILPFRLNNGTDYKCLICSVVHMSFKNLYQHMSSHYRNYYCNKCGVGYITIAALRKHMKTHEEGCFPCEYCDKIYSSKTKKRNHEKGVHKGSWLRNKCPQCPEIFVGYYDRLDHLVRVHNETPISYPCNACNKVYKKKFELNRHIKHHHLQQKSFMCDSCNAKFFSKRGLVDHLARHMGVNGFTCDTCGKVFSRFRTLRDHMRIHEEDQARYQCEVCKRAFSQKAGLRNHVRLHQDDMDIFKEFDDVKHLIDNRDLTLKQIAAENKKKATAELLRVGDDVGHRLVARRRGASEQEKTDDDFPEKVVCRKKKKIPKKYVPQIIIPIVDKTNSNRPQHHSEQSKVSHNLKTILKCSNATPFKNKNAFGYVCAYCNYTTFEDPQELRRHTHSAHAKHRLAFYADQRYKNNNVILLDIVDLKCTLCFNNYHNIKELRDHLMKKHDAFFYTDVNDYIQPFKLTKAKSQCCLCPQEFSNFKQLFAHMNEHFRNYICSTCGAGFVNKLRLKNHLLLHSTTKQTFKCGNCDQVFDNETRRKDHNATVHRALAGVNICQICNERFITYYRKQRHMIEKHNSEAYKCDRCDKSYTLITTLRKHLRQVHMKERTHECEVCKRKFFQKHRLLIHMRTILQYSNATPFKSKNVLGYDCAYCNDVTFGDPQGLRRHTHSLHTKDRLDYYSESTNKNYVLFVDILELICTVCFTHCDDIKDLQDHVIKKHDAPFYTDINDYIQPFKLTTDKSPCCLCPEVFEKFQQLVLHMNIHYPNFVCPSCGAGFVNKYRLKQHELTHVSKPAYKCIQCELVFDNPGRRRDHNATVHFARSGVHICHFDNCVKRFPTYYRKQQHLIEVHKFTANKCDRCSKSYTLKTALRKHIRRVHMNERAYGCEVCGVKFFEQFRLLQHMDIHKPQKDIQCEICNKMFKNLQYLRCHVRKFHGKKSDGFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -