Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463811.1:4737191-4742999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 4.2 1.1e+03 3.2 2.0 2 23 65 89 64 89 0.76

2 35 0.06 16 9.0 0.0 2 23 113 137 112 137 0.93

3 35 0.0044 1.2 12.5 1.9 1 23 185 207 185 207 0.97

4 35 0.44 1.2e+02 6.2 0.2 3 21 214 232 213 233 0.94

5 35 0.075 20 8.7 0.3 1 23 240 263 240 263 0.94

6 35 2.1 5.5e+02 4.1 3.8 1 23 270 293 270 293 0.83

7 35 0.00064 0.17 15.2 0.8 3 23 299 319 297 319 0.94

8 35 0.92 2.4e+02 5.2 0.8 1 23 325 347 325 347 0.98

9 35 0.042 11 9.5 0.1 2 23 418 440 417 440 0.92

10 35 1.1 2.8e+02 5.0 0.4 2 23 465 489 464 489 0.92

11 35 0.029 7.7 9.9 0.2 2 23 512 533 511 533 0.95

12 35 0.00043 0.11 15.7 0.1 1 23 537 559 537 559 0.95

13 35 0.13 33 7.9 1.0 2 21 567 586 566 587 0.94

14 35 0.03 7.8 9.9 0.6 1 23 624 647 624 647 0.95

15 35 0.00018 0.048 16.9 3.2 1 23 652 674 652 674 0.97

16 35 0.014 3.8 10.9 0.3 1 21 680 700 680 701 0.92

17 35 4.9e-05 0.013 18.7 0.3 1 23 718 741 718 741 0.96

18 35 9.9 2.6e+03 2.0 0.1 3 23 930 951 928 951 0.85

19 35 9.9 2.6e+03 2.0 1.4 2 23 977 1000 976 1001 0.90

20 35 0.00061 0.16 15.2 1.8 1 23 1050 1073 1050 1073 0.94

21 35 5.8 1.5e+03 2.7 0.3 1 21 1078 1098 1078 1099 0.92

22 35 9.5 2.5e+03 2.0 0.3 3 23 1108 1129 1106 1129 0.89

23 35 1.3 3.4e+02 4.8 0.2 1 12 1136 1147 1136 1149 0.89

24 35 0.0066 1.7 12.0 3.7 2 23 1164 1185 1163 1185 0.96

25 35 5.7e-05 0.015 18.5 0.9 1 23 1191 1213 1191 1213 0.99

26 35 0.0016 0.41 13.9 0.2 2 23 1256 1278 1255 1278 0.94

27 35 5.3 1.4e+03 2.8 0.0 2 23 1304 1328 1303 1328 0.91

28 35 0.23 61 7.1 0.1 3 23 1352 1372 1350 1372 0.93

29 35 0.42 1.1e+02 6.3 0.2 1 23 1376 1399 1376 1399 0.94

30 35 2.6 6.8e+02 3.8 1.2 1 21 1405 1425 1405 1426 0.94

31 35 0.85 2.2e+02 5.3 0.5 1 22 1433 1454 1433 1456 0.83

32 35 0.085 22 8.5 0.9 1 23 1463 1486 1463 1486 0.92

33 35 0.00085 0.22 14.8 1.1 2 23 1491 1513 1490 1513 0.94

34 35 7.9e-05 0.021 18.0 0.1 1 23 1519 1541 1519 1541 0.98

35 35 0.00017 0.044 17.0 4.6 3 23 1549 1569 1548 1570 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	4.2	1.1e+03	3.2	2.0	2	23	65	89	64	89	0.76
2	35	0.06	16	9.0	0.0	2	23	113	137	112	137	0.93
3	35	0.0044	1.2	12.5	1.9	1	23	185	207	185	207	0.97
4	35	0.44	1.2e+02	6.2	0.2	3	21	214	232	213	233	0.94
5	35	0.075	20	8.7	0.3	1	23	240	263	240	263	0.94
6	35	2.1	5.5e+02	4.1	3.8	1	23	270	293	270	293	0.83
7	35	0.00064	0.17	15.2	0.8	3	23	299	319	297	319	0.94
8	35	0.92	2.4e+02	5.2	0.8	1	23	325	347	325	347	0.98
9	35	0.042	11	9.5	0.1	2	23	418	440	417	440	0.92
10	35	1.1	2.8e+02	5.0	0.4	2	23	465	489	464	489	0.92
11	35	0.029	7.7	9.9	0.2	2	23	512	533	511	533	0.95
12	35	0.00043	0.11	15.7	0.1	1	23	537	559	537	559	0.95
13	35	0.13	33	7.9	1.0	2	21	567	586	566	587	0.94
14	35	0.03	7.8	9.9	0.6	1	23	624	647	624	647	0.95
15	35	0.00018	0.048	16.9	3.2	1	23	652	674	652	674	0.97
16	35	0.014	3.8	10.9	0.3	1	21	680	700	680	701	0.92
17	35	4.9e-05	0.013	18.7	0.3	1	23	718	741	718	741	0.96
18	35	9.9	2.6e+03	2.0	0.1	3	23	930	951	928	951	0.85
19	35	9.9	2.6e+03	2.0	1.4	2	23	977	1000	976	1001	0.90
20	35	0.00061	0.16	15.2	1.8	1	23	1050	1073	1050	1073	0.94
21	35	5.8	1.5e+03	2.7	0.3	1	21	1078	1098	1078	1099	0.92
22	35	9.5	2.5e+03	2.0	0.3	3	23	1108	1129	1106	1129	0.89
23	35	1.3	3.4e+02	4.8	0.2	1	12	1136	1147	1136	1149	0.89
24	35	0.0066	1.7	12.0	3.7	2	23	1164	1185	1163	1185	0.96
25	35	5.7e-05	0.015	18.5	0.9	1	23	1191	1213	1191	1213	0.99
26	35	0.0016	0.41	13.9	0.2	2	23	1256	1278	1255	1278	0.94
27	35	5.3	1.4e+03	2.8	0.0	2	23	1304	1328	1303	1328	0.91
28	35	0.23	61	7.1	0.1	3	23	1352	1372	1350	1372	0.93
29	35	0.42	1.1e+02	6.3	0.2	1	23	1376	1399	1376	1399	0.94
30	35	2.6	6.8e+02	3.8	1.2	1	21	1405	1425	1405	1426	0.94
31	35	0.85	2.2e+02	5.3	0.5	1	22	1433	1454	1433	1456	0.83
32	35	0.085	22	8.5	0.9	1	23	1463	1486	1463	1486	0.92
33	35	0.00085	0.22	14.8	1.1	2	23	1491	1513	1490	1513	0.94
34	35	7.9e-05	0.021	18.0	0.1	1	23	1519	1541	1519	1541	0.98
35	35	0.00017	0.044	17.0	4.6	3	23	1549	1569	1548	1570	0.95

Sequence Information

Coding Sequence: ATGGAAAACGTCAGGATTACAGACACCCCCGAAACGCCACAGATAGTAGGGTTGGGAAAGAACAAATCTTTGGAAATCGCTAATAGTCTTTTTATAGGGTCAACGTCGGAAGAGGATACAGCAATAGAAAACGCCAGGATCATATTACGGCACTCGACAGCCTACCCCATAAATCCGTTCAGAAAAAAACTGTATTGCGAGTTCTGTGGCCAAACTTTCGACTTCGGAAATCCTACCAGTTTTAGGAAACACATTGACGTCAAGCACAAGTCGCAAGACAGATCCATAGCCATCACTGATGATACAATCTTCATGCGGGTAGATATCACGGATCTTAAATGCAATGATCCGAATTGCGTCAAAATATTCCCGTCTCTAGACGACCTCGCTGAGCACTTGAAAGAGGAACACATCCTTCCCATTAATACGGAATCTTCTATTGCACTCGTGCCAGTGCGATTGCAATCAAGCAGATTAGTCTGCGTCATGTGTGACAAGGTCTGCTTGACCATCCCGGGCTTGTTGCGACATTCGGGCACACACTTTCTCCGATACACGTGTAACACATGCGGGAAAGGATTCGAAAGGTCCGAAATGTGTGAAAAGCACGAGATTACGCACACGCTCCCACAGAATTATTGCAAAAGCTGCGATTCCTCCTTCCCCACGCCGGCGGCTAAGAAAAATCATCTTCGATACAGTAAACAGTGTCAGAACTTCTCTTGTCCCATATGCAAGGATCGCTTCCAGAGCTGGAGCCAACGCGAACAGCACCTAGTCAGCATTCACGGACGCCCCAAGAAGACATTTGTATGCTCCGAATGCGGAAGGGTGTTCGAATGTCGCTCCCAGCATTACATCCACTTCCGAACCGCGCATACACGTGAGCTTGCCTGCACATATTGCAGTAAAGAGTTCAAGACTAAACGCCAGCTCTTAGAGCATACTGAGTGGCACACATCCGACACGCCGTACAAATGCTACCTCTGTGAGATAACACTAGAGTCGATGCAACACTTTGGTGAGCACATGCTCGTTCATCAGCAGAATGGTGAGGTTGTACATGGCAATAACACGGGTGCGGTCGAGGAGATAGTAGTCTTTGTTGATGATAATAACCAAACGGTGATAATAGCCAACACCGACAACGGAAGGCGAGTGCCGGGAGAAGACAAGTCGCTAGAAAACGCCAAGATAATATTAAGAAACTCCACAGCGTACCCCGTGAAGCCCGCGGTCGGGGGCATGCTACGGTGCTCGTTCTGTAGCTACACGATTGTAGACCCGGCAGAGTTGCGCAAACATATTGACCTTGACCACAAAACGGTGGATAAGGCCACTGCCATCGGCAAGAATAAACGAATTTACCTCCGCATCGACATAACAGACCTACAGTGCAAGCACGCACAGTGCATAAAACCTTTCGACTCACTCCCTGCCCTAACCAAACACCTAAAAGACGAGCACCGTCTTTCCATCGCCCCGGAAGTTTGTACCGCTCTAGTGCCTTTACGACTTCAGAATGACAAACTGTCCTGCGTGATATGCGAGAAAAACTTCTCTGGCTTCGGGGGTCTGTCGCGACACACCGGCACTCACTTTCAGAGACACATTTGCGAAGCGTGCGGGAAAGGCTTCGAGACACCCGAGGGGCTCCGTAAGCATGTCATCATGCATAAGGTCGATACCATCCAGCAGTACTGCCGTCGGTGTAAGACCACCTTCCCTACTAGCGACGCTAAGAAGAAACACCTACGGGAAAACAAGCAGTGTATGCAGTTCCGGTGCGTTGTTTGTAAGGAGCGCTTCTTGACTCAAGATAAGCGTGATGCGCATGCTAGCGCTGCTCACGGACATGCCCGCCAAGTGTATTCTTGCGCTGAATGCAGCGAAAAGTTCAGCGTACGCAGCTCATACTACCTTCACTTTCGTGCTGCTCATGGCCACGGACGATTCAAGTGCACCCATTGCGGCGGCACTTTCGCCACCAAGCACAACCTCGACATGCATATGGCACAACACACGGGCGAGAGACCATATAAGTGCGACGTCTGCCTCAAGACCTTCGTCAGCAAATACGTCTTGAAGGGCCACGAGATGAAGTTCAATAGGAAATGCAAAGTCTCTAAGTACTTGGGCATGCCGAGGCCGTTCAAGTGTGATGTCTGTGGAAAGGGTTACGTGAACAAAGACCAGCTGAGGGGGCACAAGAGGGATATACACGATGAGAGCAAGAAGAAACCGTGCACTGTTTGGCCGGGATGCGACAGCCCGCTGGATAACTTGAAGATATTAGGACCGAGATGGAACTCACCGATGGAAAACGTCAGGATTACAGACACCCCCGAAACGCCACAGATAGTAGGGTTGGGAAAGAAAAATTCCCTGGACATCGCTAATAGAACCATAACACCGTCGGATGTCGCCAAGATACGAGAGTCGAAAGGTAATACACCATTCGAAATCGCCATGAGATGCATCACACCGGCGCAAATGGCCAAGATCATGAAGTCGCGAACGACAAAGTATACAGAAACCGACAAGACATCGTTATCGAAAGGTAGACGAATTGGGAAACGGGAAAAGTCAGACAATACTCAGAAAAAACCTCTCAATCCCAAATCACCAAAAAAAATCGCCAAGACAAAAGAATCTAAGACAATAGTTGACCAAGCCTGTATCAGAACGAGAATCTGTACTGGACTGGAAAACGCCAAGATAGTATTAAAGCACTCAACATCGTACCCCATAAGGATGGAAGTTACAGGCGACGCGGACTTGATCATATGTGCATTTTGTGAAGAAACGTTCACGGCGATCACAGACTACCGGCTTCATGTGGACGAGAAACACAAGGAGGAAGACAAGTCTGCGCTGTTCATCAAACTGCCGCGCGACCGCACGATGCGTGTAGATATCACGGACCTGCGCTGCAGCGACCCAACATGCCTCCACACATACGACTCGATATCAGCACTGTCCAACCACCTGACCGAACACCACCGCCTACCCATCGACCCGAGCGCGCCGCCCCTTCTCGTACCGCTGCGGTTGAAAAACGACAAGTTGCAAATCTGCGTCGTTTGCAATAAAAAGTGTTACGGCATCCGTGAGGTTTCTCGCCATACGGGATCGCACTTCGGGAGACACACTTGCGAGAAGTGCGGGAAATGTTTCGACACGGTCGTAGGACTCCGAGCGCATGTACTTAACAACCACTCCGGACACCAGTATTACTGTAGGGCGTGCAAAACCAACTTCCCCACAGCCAAAGCGAGGAACACTCATTGGAAGGAGAACAATCCGTGTCGCGGAAGCATCTGTCGCATATGCAAGGAGCGCTTCCTAAGCATCGATCAACGACAACGACACCTCGAAGAAGTTCATGGTGAACCAAAGAAGACTTATCCCTGTGGGGAGTGCGGTCAGGTCTTCCAAACACGCATTAGGTGTTACTTCCACTTCAAAACCGCACACATACAAGATATAAAATGCGAATACTGCAATCAAACGTTTCCTACAAAACATAAGCTCGGTGTGCACGTGCATAAACACACCGGTGCCCGGCCGTTCACGTGTGACGTTTGTGCAAAAACGTTCATTGTCGAGAAGACCTTGAAGCAACACATGAAAACTCACGATGGAAGCGAACAGGAGCGGTGCCCTGTTTGTAGGTCAAGGAAGGACTCGGCATGCGCAAACACCAAGATCATACTGAGACACTCGACGGTGTATCCGATCAGTGTGGTGAGAGGACGCAAACTCACATGTGGCTACTGTAACAGCACGTTTGTGAAACCGAGCGAGTTCCGACGACACGTTGCAGTTGAACACAAGGCTGTAGATAGATACGAATTGCTCAAACGGAAAGATGGAACTCGATTGAGCCGAGTAGACATCACCGACCTTCAGTGCAGCGCACCCACCTGCGTCGAAGTGTACGACTCGCTCGCGGCATTGTCTTCCCATCTCCTTCAGATACACAAACTGCCCATCGACCCCACCAAGGAACCCCAACTAGTGCCGTTGCGACTGCAGAAGAACAATCTAGCCTGTGTCGTTTGCGAGAAATCCTTCTCTGGCATCTTCGAGTTATCGCAACACTCGGGCACGCACTTCCAAAAGCATATCTGCGAGGCTTGCGGCAGGGGCTTCGAGACTGTAGCCGGGCTCGACTATCATACGCTCACCAAGCATCAGGAGGGCCACAAGTATTACTGCGTGCGCTGCAAGACCCACTTCCCCACCTTGAAAGCGAAGACGACACACGTGCGAGAGAACAAAAATTGCCAGACGTTCGTCTGCACCGAATGCAAGGAGCGGTTCTTCTCGTTAAAACTGCGCGACCAACACCTGATCGATGCGCACGGACAAGCGAAGAAGACGTATCCATGTACTGAATGTGGCGAAGTGTTCCAAGAACGCAAGCCGTACTACAAACATTTCAAGTTGACGCACACGCAACATCTCAGATGTTCGTACTGCGATAAAAACTTCTTCAATCGAAGTGCCTACGAGATGCACATCTCCCAGCAGCATACGGGCGCGAGGCCGTTTAAATGCGATGTCTGCGATGCGACATTTGTCGGCAAAGACTGGCTGAGGAACCACATGGTGGTGCATGACACGAGCAAGCACCGCTTTTGTCCGGTCTGCAGCAAGTCCTTCATCAGGAACTACAGACTGGTGCACCACATGAAAACGCACCATCCTGGATGCTAG
Protein Sequence: MENVRITDTPETPQIVGLGKNKSLEIANSLFIGSTSEEDTAIENARIILRHSTAYPINPFRKKLYCEFCGQTFDFGNPTSFRKHIDVKHKSQDRSIAITDDTIFMRVDITDLKCNDPNCVKIFPSLDDLAEHLKEEHILPINTESSIALVPVRLQSSRLVCVMCDKVCLTIPGLLRHSGTHFLRYTCNTCGKGFERSEMCEKHEITHTLPQNYCKSCDSSFPTPAAKKNHLRYSKQCQNFSCPICKDRFQSWSQREQHLVSIHGRPKKTFVCSECGRVFECRSQHYIHFRTAHTRELACTYCSKEFKTKRQLLEHTEWHTSDTPYKCYLCEITLESMQHFGEHMLVHQQNGEVVHGNNTGAVEEIVVFVDDNNQTVIIANTDNGRRVPGEDKSLENAKIILRNSTAYPVKPAVGGMLRCSFCSYTIVDPAELRKHIDLDHKTVDKATAIGKNKRIYLRIDITDLQCKHAQCIKPFDSLPALTKHLKDEHRLSIAPEVCTALVPLRLQNDKLSCVICEKNFSGFGGLSRHTGTHFQRHICEACGKGFETPEGLRKHVIMHKVDTIQQYCRRCKTTFPTSDAKKKHLRENKQCMQFRCVVCKERFLTQDKRDAHASAAHGHARQVYSCAECSEKFSVRSSYYLHFRAAHGHGRFKCTHCGGTFATKHNLDMHMAQHTGERPYKCDVCLKTFVSKYVLKGHEMKFNRKCKVSKYLGMPRPFKCDVCGKGYVNKDQLRGHKRDIHDESKKKPCTVWPGCDSPLDNLKILGPRWNSPMENVRITDTPETPQIVGLGKKNSLDIANRTITPSDVAKIRESKGNTPFEIAMRCITPAQMAKIMKSRTTKYTETDKTSLSKGRRIGKREKSDNTQKKPLNPKSPKKIAKTKESKTIVDQACIRTRICTGLENAKIVLKHSTSYPIRMEVTGDADLIICAFCEETFTAITDYRLHVDEKHKEEDKSALFIKLPRDRTMRVDITDLRCSDPTCLHTYDSISALSNHLTEHHRLPIDPSAPPLLVPLRLKNDKLQICVVCNKKCYGIREVSRHTGSHFGRHTCEKCGKCFDTVVGLRAHVLNNHSGHQYYCRACKTNFPTAKARNTHWKENNPCRGSICRICKERFLSIDQRQRHLEEVHGEPKKTYPCGECGQVFQTRIRCYFHFKTAHIQDIKCEYCNQTFPTKHKLGVHVHKHTGARPFTCDVCAKTFIVEKTLKQHMKTHDGSEQERCPVCRSRKDSACANTKIILRHSTVYPISVVRGRKLTCGYCNSTFVKPSEFRRHVAVEHKAVDRYELLKRKDGTRLSRVDITDLQCSAPTCVEVYDSLAALSSHLLQIHKLPIDPTKEPQLVPLRLQKNNLACVVCEKSFSGIFELSQHSGTHFQKHICEACGRGFETVAGLDYHTLTKHQEGHKYYCVRCKTHFPTLKAKTTHVRENKNCQTFVCTECKERFFSLKLRDQHLIDAHGQAKKTYPCTECGEVFQERKPYYKHFKLTHTQHLRCSYCDKNFFNRSAYEMHISQQHTGARPFKCDVCDATFVGKDWLRNHMVVHDTSKHRFCPVCSKSFIRNYRLVHHMKTHHPGC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -