Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463828.1:9508965-9532529[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00012 0.03 17.5 7.0 1 23 191 213 191 213 0.97

2 13 2.6e-06 0.00069 22.7 0.2 3 23 227 247 226 247 0.98

3 13 2.9e-05 0.0076 19.4 2.1 2 23 256 277 256 277 0.97

4 13 0.00015 0.04 17.1 1.9 1 23 283 305 283 305 0.98

5 13 0.00027 0.071 16.3 0.6 1 23 311 333 311 333 0.98

6 13 2.3e-06 0.00061 22.9 7.6 2 23 340 361 339 361 0.97

7 13 0.00018 0.046 16.9 0.4 1 23 367 389 367 389 0.97

8 13 2.9e-06 0.00076 22.5 1.3 1 23 395 417 395 417 0.99

9 13 0.00014 0.038 17.2 2.0 1 23 423 445 423 445 0.99

10 13 0.0071 1.9 11.9 0.9 1 23 451 473 451 473 0.97

11 13 3.8e-05 0.01 19.0 1.5 1 23 479 501 479 501 0.97

12 13 5.1e-06 0.0013 21.8 2.8 1 23 507 529 507 529 0.98

13 13 0.00066 0.17 15.1 4.1 1 23 587 609 587 609 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00012	0.03	17.5	7.0	1	23	191	213	191	213	0.97
2	13	2.6e-06	0.00069	22.7	0.2	3	23	227	247	226	247	0.98
3	13	2.9e-05	0.0076	19.4	2.1	2	23	256	277	256	277	0.97
4	13	0.00015	0.04	17.1	1.9	1	23	283	305	283	305	0.98
5	13	0.00027	0.071	16.3	0.6	1	23	311	333	311	333	0.98
6	13	2.3e-06	0.00061	22.9	7.6	2	23	340	361	339	361	0.97
7	13	0.00018	0.046	16.9	0.4	1	23	367	389	367	389	0.97
8	13	2.9e-06	0.00076	22.5	1.3	1	23	395	417	395	417	0.99
9	13	0.00014	0.038	17.2	2.0	1	23	423	445	423	445	0.99
10	13	0.0071	1.9	11.9	0.9	1	23	451	473	451	473	0.97
11	13	3.8e-05	0.01	19.0	1.5	1	23	479	501	479	501	0.97
12	13	5.1e-06	0.0013	21.8	2.8	1	23	507	529	507	529	0.98
13	13	0.00066	0.17	15.1	4.1	1	23	587	609	587	609	0.99

Sequence Information

Coding Sequence: ATGGCTGCGCCAACTAAAACCCAGAATTTGCAGCTTGATAAAATATGCAGGGCCTGTCTCACGATAAAGAAAGACATGAGGCCATTATTTGAGCAGCTGACCGCGACAATGTTGATGGGATTGTCAAAAGTGGAGGTGGCCGTAGGCGACGGTCTGCCTGCTCAGCTGTGTCTGCAGTGCGTCCATCAACTATCCCGGTGCCACTCATTCAAGCAGCTGGTCGAGAGGAATGATGCGGTGCTGAGGGAGTATGTGACCAATCTGGAGCAGCAACGGCTCAAGGCTGAGGCTGATTTGGGAATTTTGaAAGACAAAGAAGACATAGAGAACGCCTGCCAAGAGGGCCCGTTTATGTTCATCGACATGCAGGCCTTGGAGCCACAACCTCCCCTGACTATGTTCAATGTGGATGAGGGCCAGGAAGCTTTCGTGCCGGAAAAAACGGAGCCACAGCCACAGCCCATCGAGAGTAAATCGCTGGCAAGGAGCGACGAGACCCTGAACTCTGATGAAGAGAACTATCTGCAGCTCGTGGTATTCCAGGCTTCGGCTACCGTTGCACCAGGCCGACACGTGTGCAATCTTTGCCACAAGGAGTTCAAGCACGCGCGCTGGCTGAAGCAGCACATGAAGTCTCACAGCAACTGGATCAAAGCCAACTGTAAGAAACCGCCCATGTGCCCCATCTGCGAGAGGACCTTCAAGGGTCCAGGGATGCTTAAAATGCACATGCGTACGCACGAGCAGAAGCCTCCGAAGCAGCCAGTCTGCTCCGTCTGCCAACGTACGTTCTCCAGCAAGACTCTACTGTACCGGCATCGGCAAACCCACTTCGAGCAGAAGAGCCATCAGTGCACAGTGTGTGAGAAGAGGTTCTACTCGGGATACGCGCTGCGTTCGCACATGGCGAGACACAGAGGGGAACGCCCGTATGTCTGTGCTATGTGCTCGCAGAGATTCTACAATCCCACGGATTTGAAGGTCCACTTCCGTCTCCACACCGGGGAGAAGCCCCTCAAGTGCAACGAATGCGGCAAGACGTTCCGCCGCCACTCCACCCTGTGCCAGCACATGAAGAAACACCGCGGCATCCGGAACCACGTCTGCGCAGTCTGTTCGAAGGGCTTCTACGAGGTGTCGAAGCTGAACGCGCACATGAGGGTGCACACAGGCGAGAAACCGTTCGAGTGCCAGTACTGCGAGCGCAAGTTCGCGCAGCAGTCCGCGCTGATCTACCACCGGCGCACGCACACCGGGGAGAAGCCCTTCACCTGCAAGCAGTGCTCCGCCAAGTTCACCACCTCCTCCGCCAGGAACAACCACATGCTCACTCACACCGGACATAAGAGATTCGTGTGCCCAGTGTGCATGAAGGGTTGCACCTCCCGCACGGAGCTGCGCGTGCACGCCTCCAAGCACTCGGGCGAGAAGCTGTTCGCGTGCGAGTACTGCGAGCAGCGGTTCAGCTCCGCCTCCTACCTGGCCGTGCATAGGCGACACCACACGGGAGAGAGGAAGCACCAGTGCAACATCTGCGGGAAAGCGTACGTGGAATCACGCTCCTACAAGAAGCACATGAAGACTCATGCTGACAAGAATGAGACGGAATCTATCGAGTCGCTCGTCTCCGAGAGCAGCTCCGAGCAGAGCCCCGCGCTGGGCAAGAGTGACGACAGCCAGCCCGAGCAGCCCAGCGAGACTGACAACAACCAGGTCTCGAGCGCTGCTCCGGAGCGGCGGCCGGCGGTACTGCGCCGCTACAAGTGCGGACTGTGCTTGAAGTCCTACATACATATGCACGCGCTCAAGAAGCACATGATGTCGCACGTGCAGGTCACCATATATGCCGACGATGTCGCCGCAGTCGTGACGGGGCGTATCGTCGACGAGCTGGAGGCGCGACTGCGCACGGTCGCCGAGCGGCTGCGTCAATAG
Protein Sequence: MAAPTKTQNLQLDKICRACLTIKKDMRPLFEQLTATMLMGLSKVEVAVGDGLPAQLCLQCVHQLSRCHSFKQLVERNDAVLREYVTNLEQQRLKAEADLGILKDKEDIENACQEGPFMFIDMQALEPQPPLTMFNVDEGQEAFVPEKTEPQPQPIESKSLARSDETLNSDEENYLQLVVFQASATVAPGRHVCNLCHKEFKHARWLKQHMKSHSNWIKANCKKPPMCPICERTFKGPGMLKMHMRTHEQKPPKQPVCSVCQRTFSSKTLLYRHRQTHFEQKSHQCTVCEKRFYSGYALRSHMARHRGERPYVCAMCSQRFYNPTDLKVHFRLHTGEKPLKCNECGKTFRRHSTLCQHMKKHRGIRNHVCAVCSKGFYEVSKLNAHMRVHTGEKPFECQYCERKFAQQSALIYHRRTHTGEKPFTCKQCSAKFTTSSARNNHMLTHTGHKRFVCPVCMKGCTSRTELRVHASKHSGEKLFACEYCEQRFSSASYLAVHRRHHTGERKHQCNICGKAYVESRSYKKHMKTHADKNETESIESLVSESSSEQSPALGKSDDSQPEQPSETDNNQVSSAAPERRPAVLRRYKCGLCLKSYIHMHALKKHMMSHVQVTIYADDVAAVVTGRIVDELEARLRTVAERLRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -