Agoe032071.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyresthia goedartella
Gene Symbol
PGBD4
Assembly
GCA_949825045.1
Location
OX463811.1:34116823-34124401[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-07 0.00021 23.7 0.0 5 35 18 49 15 54 0.92

Sequence Information

Coding Sequence
ATGGTCCGACATTATAtaaggaaaaaacaaaaaacctacTCTGATTCTGTGCTGGAGCAAGCTGTAGAAGACGTTAGAAATGGTCTTATGACCTGTTCTGTAGCAGCTACAGTCCATGGGGTGCCCAGGACTACCATAAACACAAGACTCCTGTTAGACAGACAATACCAAAACAATACCGCTGGCCGACCAACAGTGTTTTCGGCAGCGACTGAGAAAAAAATGGCCGAAAACCTTCATATTATGGAAAAACATGGTTTCCCACTAACAAGAAAAGAAGCGAGGATTTTAATTGCAGAATATGTTCGAATAAACAAAATTGAAACTCCTTTCAAAAATGACGTTCCAGGTAAGGACTGGTTTTTAGGATTCCAAAAACGAAATGGCATGTCGATCAAGAAACCCCAAAACGTTGAGATGAAACGGCGAAAGGCTGTCGATCCATTTATAGTGCATGGGTACATAGATTTGCTCGAGAAAGTAGTAGAGGACTTAAATATAAAGGATAAACCACATCGAATCTATAACCTTGACGAAACGTCTATCTGTAATGATCCAGTTAAAGGAAAAGTCATGGGGAAGAAAGGGTTTCGGTCGACCAGAACTACAAGTGGACCTGGGCGGAATAATACAACAGTCCTTCTAGCAAGCAATGCCTGTGGTGATAAAGTACCACCGCTGATTATTTTTCAAGGCATGTATCTTTGGTCGGAGTGGCTGTATCCAGACCAAAACGTAGAAACCGCTTATGCGGTAAGTAAGAAAGGTTGGATGGAGACATCGATCTTCGAACAATACATGAGAAAAACGTTTGTGCCTGCATTAGGGGATGAAAGACCTGTCCTTGTCATATTAGATGGTCACTCTACTCACGTGGATTTGAATGTCATAGAATATGCAGCATCACAAGACATCACAGTTCTCAAACTCCCACCACACTCATCTCATATTTTGCAACCGCTGGATTGTAGCACAATGAAGCCCCTGAAGGACAACTGGGAAGATGAAATCATCAAATGGCAGAGGCTTCATGTCGGAGCAAAACTACAAAAAAGCGAATTCGCGAAAATGTTAACAAAAATATGGAATGACATGGACGCcaccattttacaaaatggGTTCAGGAAAGCCGGAGCATATCCAATAAATCGAGAAGCTATTCCAAAAGAAGAATACGATAGCTTGTTGTGGAAAAAATGGgtagaattcaaaagacagcAAGCGGAGCTGGTCCAAATGGCACCAGGGGACAGTGTCAAAACTGATTGTGAAGCTATAGAAAATACAGTTCCAAGTTTGTTAAGCTTGGCTATAAAAAAGATCAATGATCATCTACTTACtgagatcaataataattacattattgAAGAAAGCTATTCGAAGAACATCTTTCAAACAAGTCAAGGACAAAAGATGGACGAAGAAATGCTGGAAGTACAGGACTTAAGTGAAGAAGTACGCAGTAGTTTGAAAGTAACCAGCAAAAGAGCACCAAAAATGCAACTAaagcaaaaacaacaaaaaagtgAAGAATTTCAATATTtgccaaatataaaaaaaacaaagaacgtTAAATCGGAAGAAGTAAAAAATTTCATGCTGgttaataaagaaaaaacacaGACATTGAAGATGGACGAAGAAATGATGGAAATACGGGAATTAAGTGAAAAAGTAAGCagtagtgtgaaagtaaccagcAAAGTAGCACCAAAAATGCAACTAAAGCAGAAACAAGAAAAAAGTGAAGAATTTCAATATTTGCCAAATATAAAAGAAACAAAGAACGTTAAATCGGAAGAAATAAAAGATTTCATGGtggtaaataaagaaaaaacacaGACATTGAAGATGGACGAAGAAATGATGGAAATACGGGAATTAAGTGAAGAAGTAAGCAGTGGTGTGGAAGTAACCAGCAAAGTATCACCAAAAATGCAACTAAAGCAGAAACAAGAAAAAAGTGAAGAATTTCAATATTTGCCAATTATAAAAGAAACAAAGAACGTTAAATCGGAACAAACAAAAGATTTCATGGtgcttattttttgtatttctagtAGTCGATCGCGATCCACCTCGACCTCAAGGTCGAGGTCGGCGACGCCTGTGGCGCATGAGCTGCGGGCCAGGCGTTGCCTGGGCATGGTGATGGCGGCGACAGCCTCCACCGAGCGGGAACCTGAAGTGGAAATCGAACCTAAAATTTGGAGACCGGTGATTCCTGCTCGACCACCTCCACGACCTCAACAGTCCCACCGACGACCCGTCGCTCCGGGTGTGGAAGCAACTCCCGAAGGCTCTATCCGGCGCAAGAAGGAGTTGGAGCAccttCGCCCTGAGGAAATCATAGAAGAGTGTGGGATGGACGCCCAGGAGGGAGAAGCGGCTGTAGCGGATCACTTTGATCATGTAAGAAAATGGGTGGATGGGTTGCAGTCGGGAACTCCCGAAAGCATGAGCCCTTCTCGCAGCATGCTTGGGTCTGAGGTAGAACCTGAATATCTGTCGGTGGTCACTGCTAGTGATCGTGCTCATACTGATCTGCTGATACCTGGTTGTCAGTCAGCTGATCAGAGACCGGCAACTAGCAGTGACAATCACAGTGGGTTAGCAGTGTCTACTTTTCGGCAGATGGATGCTGTTCCGTCATGTTCAGGGATGACAGCAGTAGCACCCATCAGGAATGCTGCGCGACCGGTCAACGACGGCAGTGATCTCGATTCAGATTTCGACGACGAGTTCGATGTTGACGCGATCATTGACGCTCGTGATCCCATGCTAAGGATTATTCCTGACGACAGGGAGTTAGATCCACGTACTCGCGAAATAGTAACTTCGGTTGAGAGGGAAATGGATGCAGCCATTGACCGTCTGGTGGGCCCATGTGATGGTTTTACTTGGCAGGAAGACTTTGCCACTTTCAGGGGTGTGCAGGAAATTTTTTCCGGCCCACGCCCTGGATCTGTCAAAGACTACGATACGCCCTATGATGCCTTTTGTGATATCTGGAGCGATGACATCATTGGTCGTATGGTTGAGGAAACCAACAGATATGCTCATCAGACGATTAACGCATTACTTGAAGCAAGACATTTGAAGCGGACATCTCGTTTGGATCGGTGGATTGACACCGATGCAAATGAGATGCGCGTGCTTCTAGCCATATATATGTTGATGGGGTTTTTGAAACATTCATCTCAGCATGAATACTGGAAGACGACCGGCATCCTACAGTTGCCCTACTTCAGGCAGGTGATGTCGTTCAATCGTTTTGTTTTGCTGAACAAATTCCTCCACTTTACGGACAATGTTGGTGTGAGTCAAGATTTACCGCAAATTGGAGGGGTTTTGCTCTCAGCAAAGCTACGAAAGATAGCATCACTGATCGTGCACCTCAATGATAAATTTTTTTCAATGTACAACCTCGACCAAGATGTCGCCATCGATGAGTCGTTGACCTTATACAAAGGCCGCTTGTCCTGGGTCCAAGCGATAAGGTCAAAGGCTGCGCGTTTTGGTATCAAATCATTTGAGCTGTGCGAGTCAAGCACTGGgtatttgtctagatttcaaATCTATACGGGGAAGGATACGAATTCCGTTCGCAGCGATGTTGCGACTCTTAGTGCAGACTTGGCTGGTAAGAGTACCCAAGTGGTACTCGATTTATTGAAAGGTCTTGAACATCGGGGTCACTGCGTCACGATggacaattattataattctcCAGCGTTGGCAAGGTACCTTAAGAGTAAAGGATTTGATTGTGTGGGGACGTTGCGTGCTAATCGCAAGAATGTACCAGTTCCGATCGCGAAGGCTCCGAAGAAGATGGCTAAGGGGACAATCATTGCTCGCCATTCTGGTGACGTGTCATGCCTCGCATGGCAAGACACTAGGACGGTGAGTATGATCTCCACTTACCATAATTCGGACACCGTCGTAGGTCGAAAGGCTGGAAAGGAACTAGTGAAGCCCTGTGTAGTCCAGGACTACAACAATACTATGGGAGGAGTTGATCTAAAAGATCAAAAACTCTCCATGTATTTGTTGGAAAGAAAGAGATGCCTGAAATGGTatatgaaaatttttaaaaGGTTACTGAATGTCAGTGTGCACAACGCTTTCGTTTTGATGACGAATTCCAGGAGACGTCGCGATTTGTCCGTGATGACGCACCGCCTTTTCCGGGAACAACTGGCCGAAACGTTGGTGAAAGTTCACCGCCAATCGGACCCAACAACCAACTTAGGTCTTTCGACGGAGACGCGTCTGAATCGAAACATATTGCATAGACCAGAACATGTTTCGTCAAAATATCGAAAGCGTTGTCATATCTGTCATCGGCAAGATATTCGTACAGCGGTAGCTTCTAAATGCGTCACCTGCGACCGGTTCCTGTGCTTTCAACCTTGTTGGGAAATTTGGCACTGGTGTCAACACTTGCCTGGCAAGGATAAACAAACCAGGGCCCCGGCACGGAGGCGCGAATAA
Protein Sequence
MVRHYIRKKQKTYSDSVLEQAVEDVRNGLMTCSVAATVHGVPRTTINTRLLLDRQYQNNTAGRPTVFSAATEKKMAENLHIMEKHGFPLTRKEARILIAEYVRINKIETPFKNDVPGKDWFLGFQKRNGMSIKKPQNVEMKRRKAVDPFIVHGYIDLLEKVVEDLNIKDKPHRIYNLDETSICNDPVKGKVMGKKGFRSTRTTSGPGRNNTTVLLASNACGDKVPPLIIFQGMYLWSEWLYPDQNVETAYAVSKKGWMETSIFEQYMRKTFVPALGDERPVLVILDGHSTHVDLNVIEYAASQDITVLKLPPHSSHILQPLDCSTMKPLKDNWEDEIIKWQRLHVGAKLQKSEFAKMLTKIWNDMDATILQNGFRKAGAYPINREAIPKEEYDSLLWKKWVEFKRQQAELVQMAPGDSVKTDCEAIENTVPSLLSLAIKKINDHLLTEINNNYIIEESYSKNIFQTSQGQKMDEEMLEVQDLSEEVRSSLKVTSKRAPKMQLKQKQQKSEEFQYLPNIKKTKNVKSEEVKNFMLVNKEKTQTLKMDEEMMEIRELSEKVSSSVKVTSKVAPKMQLKQKQEKSEEFQYLPNIKETKNVKSEEIKDFMVVNKEKTQTLKMDEEMMEIRELSEEVSSGVEVTSKVSPKMQLKQKQEKSEEFQYLPIIKETKNVKSEQTKDFMVLIFCISSSRSRSTSTSRSRSATPVAHELRARRCLGMVMAATASTEREPEVEIEPKIWRPVIPARPPPRPQQSHRRPVAPGVEATPEGSIRRKKELEHLRPEEIIEECGMDAQEGEAAVADHFDHVRKWVDGLQSGTPESMSPSRSMLGSEVEPEYLSVVTASDRAHTDLLIPGCQSADQRPATSSDNHSGLAVSTFRQMDAVPSCSGMTAVAPIRNAARPVNDGSDLDSDFDDEFDVDAIIDARDPMLRIIPDDRELDPRTREIVTSVEREMDAAIDRLVGPCDGFTWQEDFATFRGVQEIFSGPRPGSVKDYDTPYDAFCDIWSDDIIGRMVEETNRYAHQTINALLEARHLKRTSRLDRWIDTDANEMRVLLAIYMLMGFLKHSSQHEYWKTTGILQLPYFRQVMSFNRFVLLNKFLHFTDNVGVSQDLPQIGGVLLSAKLRKIASLIVHLNDKFFSMYNLDQDVAIDESLTLYKGRLSWVQAIRSKAARFGIKSFELCESSTGYLSRFQIYTGKDTNSVRSDVATLSADLAGKSTQVVLDLLKGLEHRGHCVTMDNYYNSPALARYLKSKGFDCVGTLRANRKNVPVPIAKAPKKMAKGTIIARHSGDVSCLAWQDTRTVSMISTYHNSDTVVGRKAGKELVKPCVVQDYNNTMGGVDLKDQKLSMYLLERKRCLKWYMKIFKRLLNVSVHNAFVLMTNSRRRRDLSVMTHRLFREQLAETLVKVHRQSDPTTNLGLSTETRLNRNILHRPEHVSSKYRKRCHICHRQDIRTAVASKCVTCDRFLCFQPCWEIWHWCQHLPGKDKQTRAPARRRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-