Agoe060799.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyresthia goedartella
Gene Symbol
clz9
Assembly
GCA_949825045.1
Location
OX463818.1:32342787-32350774[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-07 0.00011 24.6 0.0 5 35 18 49 15 54 0.92

Sequence Information

Coding Sequence
ATGGTCCGACATTATAtaaggaaaaaacaaaaaacctacTCTGATTCTGTGCTGGAGCAAGCTGTAGAAGACGTTAGAAATGGTCTTATGACCTGTTCTGTAGCAGCTACAGTCCATGGGGTGCCCAGGACTACCATAAACACAAGACTCCTGTTAGACAGACAATACCAAAACAATACCGCTGGCCGACCAACAGTGTTTTCGGCAGCGACTGAGAAAAAAATGGCCGAAAACCTTCATATTATGGAAAAACATGGTTTCCCACTAACAAGAAAAGAAGCGAGGATTTTAATTGCAGAATATGTTCGAATAAACAAAATTGAAACTCCTTTCAAAAATGACGTTCCAGGTAAGGACTGGTTTTTAGGATTCCAAAAACGAAATGGCATGTCGATCAAGAAACCCCAAAACGTTGAGATGAAACGGCGAAAGGCTGTCGATCCATTTATAGTGCATGGGTACATAGATTTGCTCGAGAAAGTAGTAGAGGACTTAAATATAAAGGATAAACCACATCGAATCTATAACCTTGACGAAACGTCTATCTGTAATGATCCAGTTAAAGGAAAAGTCATGGGGAAGAAAGGGTTTCGGTCGACCAGAACTACAAGTGGACCTGGGCGGAATAATACAACAGTCCTTCTAGCAAGCAATGCCTGTGGTGATAAAGTACCACCGCTGATTATTTTTCAAGGCATGTATCTTTGGTCGGAGTGGCTGTATCCAGACCAAAACGTAGAAACCGCTTATGCGGTAAGTAAGAAAGGTTGGATGGAGACATCGATCTTCGAACAATACATGAGAAAAACGTTTGTGCCTGCATTAGGGGATGAAAGACCTGTCCTTGTCATATTAGATGGTCACTCTACTCACGTGGATTTGAATGTCATAGAATATGCAGCATCACAAGACATCACAGTTCTCAAACTCCCACCACACTCATCTCATATTTTGCAACCGCTGGATTGTAGCACAATGAAGCCCCTGAAGGACAACTGGGAAGATGAAATCATCAAATGGCAGAGGCTTCATGTCGGAGCAAAACTACAAAAAAGCGAATTCGCGAAAATGTTAACAAAAATATGGAATGACATGGACGCcaccattttacaaaatggGTTCAGGAAAGCCGGAGCATATCCAATAAATCGAGAAGCTATTCCAAAAGAAGAATACGATAGCTTGTTGTGGAAAAAATGGgtagaattcaaaagacagcAAGCGGAGCTGGTCCAAATGGCACCAGGGGACAGTGTCAAAACTGATTGTGAAGCTATAGAAAATACAGTTCCAAGTTTGTTAAGCTTGGCTATAAAAAAGATCAATGATCATCTACTTACtgagatcaataataattacattattgAAGAAAGCTATTCGAAGAACATCTTTCAAACAAGTCAAGGACAAAAGATGGACGAAGAAATGCTGGAAGTACAGGACTTAAGTGAAGAAGTACGCAGTAGTTTGAAAGTAACCAGCAAAAGAGCACCAAAAATGCAACTAaagcaaaaacaacaaaaaagtgAAGAATTTCAATATTtgccaaatataaaaaaaacaaagaacgtTAAATCGGAAGAAGTAAAAAATTTCATGCTGgttaataaagaaaaaacacaGACATTGAAGATGGACGAAGAAATGATGGAAATACGGGAATTAAGTGAAAAAGTAAGCagtagtgtgaaagtaaccagcAAAGTAGCACCAAAAATGCAACTAAAGCAGAAACAAGAAAAAAGTGAAGAATTTCAATATTTGCCAAATATAAAAGAAACAAAGAACGTTAAATCGGAAGAAATAAAAGATTTCATGGtggtaaataaagaaaaaacacaGACATTGAAGATGGACGAAGAAATGATGGAAATACGGGAATTAAGTGAAGAAGTAAGCAGTGGTGTGGAAGTAACCAGCAAAGTATCACCAAAAATGCAACTAAAGCAGAAACAAGAAAAAAGTGAAGAATTTCAATATTTGCCAAATATAAAAGAAACAAAGAACGTTAAATCGGAAGAAATAAAAGATTTCATGGtggtaaataaagaaaaaacacaGACATTGAAGATGGACGAAGAAATGATGGAAATACGGGAATTAAGTGAAGAAGTAAGCAGTGGTGTGGAAGTAACCAGCAAAGTATCACCAAAAATGCAACTAAAGCAGAAACAAGAAAAAAGTGAAGAATTTCAATATTTGCCAATTATAAAAGAAACAAAGAACGTTAAATCGGAACAAACAAAAGATTTCATGGtgATTTTGAGCCCCGACCTTATACATATCCCTTTCGACTTGGCGCAGAATATATTCGAAAGCGACATAGAAGTAGAAGACACTCGTCCTCCGCCTCCGAAGAGAATGAGGAATACTGCAGCAACAAAACGAAGCTCAAGCGAAAATCGGAAAACTCGCAATTCTTCCTACGTGTACAACAAAATCAGTGGAAAAGGACATCATTTGGTGAAGATCGCAGTGTTCGACCTTAGTGAAGAAAATAATCAAAGTGTTGTGTTAAGTGCTCAATACGTGTGCCGTGATATTATAGATGAGGTTATGGACATGGTTGAGAACATTATCCGAATAATTTCGAAAAAGGTATGCGAAAATGTTGcactgtaa
Protein Sequence
MVRHYIRKKQKTYSDSVLEQAVEDVRNGLMTCSVAATVHGVPRTTINTRLLLDRQYQNNTAGRPTVFSAATEKKMAENLHIMEKHGFPLTRKEARILIAEYVRINKIETPFKNDVPGKDWFLGFQKRNGMSIKKPQNVEMKRRKAVDPFIVHGYIDLLEKVVEDLNIKDKPHRIYNLDETSICNDPVKGKVMGKKGFRSTRTTSGPGRNNTTVLLASNACGDKVPPLIIFQGMYLWSEWLYPDQNVETAYAVSKKGWMETSIFEQYMRKTFVPALGDERPVLVILDGHSTHVDLNVIEYAASQDITVLKLPPHSSHILQPLDCSTMKPLKDNWEDEIIKWQRLHVGAKLQKSEFAKMLTKIWNDMDATILQNGFRKAGAYPINREAIPKEEYDSLLWKKWVEFKRQQAELVQMAPGDSVKTDCEAIENTVPSLLSLAIKKINDHLLTEINNNYIIEESYSKNIFQTSQGQKMDEEMLEVQDLSEEVRSSLKVTSKRAPKMQLKQKQQKSEEFQYLPNIKKTKNVKSEEVKNFMLVNKEKTQTLKMDEEMMEIRELSEKVSSSVKVTSKVAPKMQLKQKQEKSEEFQYLPNIKETKNVKSEEIKDFMVVNKEKTQTLKMDEEMMEIRELSEEVSSGVEVTSKVSPKMQLKQKQEKSEEFQYLPNIKETKNVKSEEIKDFMVVNKEKTQTLKMDEEMMEIRELSEEVSSGVEVTSKVSPKMQLKQKQEKSEEFQYLPIIKETKNVKSEQTKDFMVILSPDLIHIPFDLAQNIFESDIEVEDTRPPPPKRMRNTAATKRSSSENRKTRNSSYVYNKISGKGHHLVKIAVFDLSEENNQSVVLSAQYVCRDIIDEVMDMVENIIRIISKKVCENVAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00162676; iTF_00162677; iTF_00162678; iTF_00162679; iTF_00162684;
90% Identity
iTF_00162676;
80% Identity
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