Agoe026706.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463811.1:2607785-2608549[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-07 0.0004 22.8 0.0 4 39 28 63 25 69 0.89 2 2 7.4 3.2e+03 0.7 0.0 16 25 142 151 138 151 0.83
Sequence Information
- Coding Sequence
- ATGATCCGAAGCTATATTCGGTCATTTCGAAACAGCAGAAATGGTAAACAGCATAAACCGTACAAACTGTACAATGATAATGCTCTCGAAGAAGCTATGCAGCTGGTGCGTCTAGGTCGCGCGACGTTAACCGAAGCAGCAAGCCGGTATGGTATTCCTCCATCGACCCTGTGTAGGAAACTTAAAGGCTACAACAACACTCAGATGTCCGCGGGTCGCCCTACATTGTTCAGCGAGGAAGAAGAGAAGGTATTTGTTGAACATATCAAAGCCTTGACTGAATGGGGTTTCCCCTTTGATATCAAAGATATAAGAATGATGGCTAACAGTTACCTCATACGAATCGGAAGAACTGttccttatttaaaaaataatgtaccGGGTAAGGACTGGGCTCACAACTTCTTACGAAGACATCACGAGGAGCTATCGACGCGAAAGGCCGGAAACATTTCATCAGGTCGAGCCGCAATCGATCCGCCGACGATTCGAAAATTTTTCATAAATTACGAAGAGGTTGCCCAAGACGTACCGGCTGCAAACATCATCAATTACGATGAGACCAACTTTACTGATGACCCTGGGGCCAAGAAAATCGTGTGCAAACGAGGCGAAAAGTATCCTGAAAGAATATTAAACACATCCAAGACTGCCATCAGTATTATGTTTGCAGGCGCTGCTGATGGCACTATGCTAAACCcatatgttgtttacaaagttttggCAGACATGGATAGATGGAGGTCCTCCAGGCTGTCGTTATAA
- Protein Sequence
- MIRSYIRSFRNSRNGKQHKPYKLYNDNALEEAMQLVRLGRATLTEAASRYGIPPSTLCRKLKGYNNTQMSAGRPTLFSEEEEKVFVEHIKALTEWGFPFDIKDIRMMANSYLIRIGRTVPYLKNNVPGKDWAHNFLRRHHEELSTRKAGNISSGRAAIDPPTIRKFFINYEEVAQDVPAANIINYDETNFTDDPGAKKIVCKRGEKYPERILNTSKTAISIMFAGAADGTMLNPYVVYKVLADMDRWRSSRLSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -