Basic Information

Insect: Argyresthia goedartella
Gene Symbol: -
Assembly: GCA_949825045.1
Location: OX463821.1:21850646-21853501[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.2e-08 3.1e-05 26.4 0.0 2 35 11 44 10 51 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.2e-08	3.1e-05	26.4	0.0	2	35	11	44	10	51	0.90

Sequence Information

Coding Sequence: ATGGCgtacaaaaaaagaaaattgtatTCAAAGGAAGATATGGAGGATGCCATAATGGCAGTACGCCAAAACAAAATGGGTTACTTGAAAGCCGCTAAAACATTTAACGTACCGAGGACTACATTGTTCCGCCTGGCGTCTGAGAAAGACACGTCTATAGAAGCCCTCTTATCAAAAAAAATCGGTCGAAAACCAGTTTTTGATGAACGATTTGAAAATGAACTAACAGATTACGCTTTGGTAATGGAGAGTACACTGTATGGTTTAACGCAGACTGACATGCGTCGATTGGCCTATCAgcttgcaaaaaaaaacaaattaccaAACCCTTTCAGAAATGAAATGGCAGGCCGGTATTGGTTCAAAGGATTTTTAAAGAGAAACAAAGCTCGACTTTCCATGAGGCAGCCCACAGGTACCTCGTTTGCCAGGGCTCGTGGATTTAATAAAGAATGTATGGATGGGTTTTATGACATCTTGGAGAAGACATATGAAGAGAAAAAATTCAGTGCAGACAGAATATACAATGTCGATGAGACGGGACTATCTATAGTGCAAAGCAAGATTCCAAAAGTGATTGGCCGGCGCGGGAAGAAACAAATCGGTGCTATATCATCAGCAGAAAGAGGTTCACTGATAACTATAGTCACTTGTATGAGTCCGGCAGGAATATTTGTGCCTCCCATGATAATTTTTCCACGAAAAAATATGACCGAAAACCTGATGAGAGGTGCTCCGCTCGGATCCATTGGTAGAGCTCATCCCTCGGGATGGATACAGACGTATTTGTTCACCCAGTGGTTTGAGCATTTTGTCAAGTTTGTGAGACCAACTGAGGCTGCGCCTGTCCTCTTGTTATTAGATGGGCATTACAGCCACACAAAAAACATTGAGTTGGTGGACATAGCAAGAAGAGAGCATGTGACAATTGTTTCACTGCCACCCCATTGCACCCACAAAATCCAACCCTTGGATAGATCATTCATGTCTCCGCTCAAAACACACTACAGTGAAGAGATCAGGATGTGGTTGCGCGGAAAAAACAAACCGCTGACACAATATGATATTGTAGAACTATTTGGTACAGCATACCTAAAGTGCATGAATGGATCAATCGCTGCAAACGGATTCAGGGTTGGTGGCATATACCCACTGAACAGGCACGTGTTCTCAGAAGCTGACTATATTGCTGCTCGCAATGAAGGAAATGATTATAGAGGCGATGAAAACGACGAAATAAGTGAACCTGTACTGATGAATGTGGATCAAGGAGAACCATCAGTAACAGAGATGCTTGAAGAAGCAGGACCACCCAATGATGGTCAATTAGACACGTCGACTCAACAAGACTCGTTGTCTGTACTGATTAATGCAGATCAAGAAGAACCATCAGTGACAGAGATGCTTTATGAAGCAGGACCACTCAATGATGGTCAATTAGACACGTCGACTCAACAAGACTCGTTGTCTGTACTGATGAATGCAGATCAAGGAGAACCATCAGTAGCAGAGATGCTTGAAGAAGCAGGACCACTCAATGACGGTCAATTAGACACGTCGACTCAACCAGACTCGTTGCCTCGAACAGGTGTACTCTACCAAGCAAGTCCTCCTTCTCTAACTAAATTAGTTAGAAAATTAGTCCTCTCATTATTAAATGATTGTCAAGCAGACACCTCATCTCAAGCATCACCACCAAACCAAGCTAGACCATCTTCTGCTCTGATATATGATATTCAGGAAAACTTGTTGCCTCAAGCAGGCCCGTTCAATCAAGCAAATTCATCTATATCCAACAAGCATGTGTCACCTTATGCTATTTCACCCTCATTGTTAAATGATTGTCAAGCAAACACCTCGTCTCAAGCAGCACCACCGAACCAAGCTAGACGATCTTCTGCTCTGATATATGATATTCAGGAAAACTTGTTTCCTCAAGCAGGCCCGTCCAATCAAGCAAGTCCATCTATATCCAACACGCATGTGTCACCTTATGATATTTCACCACTGCCAGCATTAACAAAACGCACGTCTAACAGAGGTCGTAAACCAGGTAAATCGGCAATCATAACAAGTTCGCCTTATAAAAAGATACTTGAGGAGGCTGAAAATAGAAAGTTAGATAAACAGAAAGCAATAGACATAAAAATGTTACAAACCCCTAGGACAGAAAACAGAAAAGATACGTGTAAAGTTAACAAAAAGGAGATGAACGTGGAAAACCTAGAAAGACAAAAGACTAAACAAAAAATTGAAAACAGAAAAGATAAAGGAAAGGGCAAAAAGAGCAAGAACCTGGATAACCTGGAAAGACAAAAGATTAAACAAGAATTTGAAATCAGAAAAGATAAAAGGAAGGGCAAAAAGGGCAAGAACCTGGAAAACCTGGAAAGAAACAAGATTAAACAAGAATTTGAAAACAGAAAAGATAAAGGAAAGGGTAAAAAGGGCAAGAacatagaaaaagaaaaacgtGAAACCTTTGAAAACAGAACAAATAAAGGAAAAGAAAACCAAAAAACGAAAGAAATTAAGAAGATAAAGGCAGATGATTTGAAAATAGTCAAAGGAAAAAAGAGTAGGAAACGGGCACTCGCTGTAATAAATAATGATGATTCTGACAGCCTATCTTCAATTTCATATAATAGTCGAAACTCGGATACGTCTGGAGAAATCGAAGATTATTTTAGTGTAAAGCCTAGTAGTAGTGATGCAGAGTGTTTTTTCTGCAATGGGAAGTATAGCGAGGACAAGAGGGGCGAAACATGGGTGCAGTGTTTCATGTGTGACCTTTGGGTGCACTGTGAATGTGCTGGCTACGACGCCGGCTCATACGTTTGTGATTATTGCAAATaa
Protein Sequence: MAYKKRKLYSKEDMEDAIMAVRQNKMGYLKAAKTFNVPRTTLFRLASEKDTSIEALLSKKIGRKPVFDERFENELTDYALVMESTLYGLTQTDMRRLAYQLAKKNKLPNPFRNEMAGRYWFKGFLKRNKARLSMRQPTGTSFARARGFNKECMDGFYDILEKTYEEKKFSADRIYNVDETGLSIVQSKIPKVIGRRGKKQIGAISSAERGSLITIVTCMSPAGIFVPPMIIFPRKNMTENLMRGAPLGSIGRAHPSGWIQTYLFTQWFEHFVKFVRPTEAAPVLLLLDGHYSHTKNIELVDIARREHVTIVSLPPHCTHKIQPLDRSFMSPLKTHYSEEIRMWLRGKNKPLTQYDIVELFGTAYLKCMNGSIAANGFRVGGIYPLNRHVFSEADYIAARNEGNDYRGDENDEISEPVLMNVDQGEPSVTEMLEEAGPPNDGQLDTSTQQDSLSVLINADQEEPSVTEMLYEAGPLNDGQLDTSTQQDSLSVLMNADQGEPSVAEMLEEAGPLNDGQLDTSTQPDSLPRTGVLYQASPPSLTKLVRKLVLSLLNDCQADTSSQASPPNQARPSSALIYDIQENLLPQAGPFNQANSSISNKHVSPYAISPSLLNDCQANTSSQAAPPNQARRSSALIYDIQENLFPQAGPSNQASPSISNTHVSPYDISPLPALTKRTSNRGRKPGKSAIITSSPYKKILEEAENRKLDKQKAIDIKMLQTPRTENRKDTCKVNKKEMNVENLERQKTKQKIENRKDKGKGKKSKNLDNLERQKIKQEFEIRKDKRKGKKGKNLENLERNKIKQEFENRKDKGKGKKGKNIEKEKRETFENRTNKGKENQKTKEIKKIKADDLKIVKGKKSRKRALAVINNDDSDSLSSISYNSRNSDTSGEIEDYFSVKPSSSDAECFFCNGKYSEDKRGETWVQCFMCDLWVHCECAGYDAGSYVCDYCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00162653;
90% Identity: iTF_00162653;
80% Identity: iTF_00162655; iTF_00162656;