Agoe064126.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- Jrkl
- Assembly
- GCA_949825045.1
- Location
- OX463819.1:26662202-26663842[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-08 7.3e-06 28.4 0.0 3 38 16 51 14 54 0.91
Sequence Information
- Coding Sequence
- ATGCCTCGTAATTACAAACGAAAAACAGTGACGAAATACAGTCTAGAAGATCTCAAAAAGGCTATAAATGATGTTCAAACCAATAAACTTACCATCGGCAAAGCTGCAGAAACTTATAATATTCCAAAAACTACAATATTTGATCACCTAAAGAAACCAGTGATTAAATTGCCAATAGCTGGTCGAAAAACTTTATTCACAGGCGAGCAAGAAGCTGAACTCGtggattatataataaaatgcaGTAAACTTTATTACGGCCTAACCATAAAAAAAATTCGCCGAATTGCGTACCAATATGCTGAGATGAACAAACTTCCTCATAATTTCGACCGAGTAAAACAGCTAGCCGGGAAAGACTGGTATTACAGTTTCATGAAAAGACATCCCAGCCTATCTCTGAGAACACCTGAGGCGACTTCACTGAATCGTATCACAGCATTCAATGAAACTGACGTTCAAgttttttatgataatttgaagGCCATACAAGAGAAATATCATATTCAACCTGATAAAATGTTTAACGTCGATGAGACAGGTATATCAACAGTCCagaaaaatcagaaaatggtgGCAGTAAGAGGTCAGAAACAAGTTGGTAAGGCAACAAGTGCCGAAAGGGGATctacaacaacagtggtttgtGCATTTAGTGCAGCCGGTCAATACATTccaccattttttatttttaaaagaaaacgcATGAATCCACTGTTACTAAAAGGTAGTAACCCTAACATGATTGGAGCTGTGTCAGACTCTGGTTGGATAAATGAAAGTCTTTTTGTTGATTGGCTACACCACTTCATTTCATATGCAAAGCCTTCAAAAGAAGATCCAGTGTTGCTCATATTGGATAACCATGAAAGCCACATAAGTCTTGATGCTTATTCACTATGCAGAGAACATGGAATCATTATGCTGACTTTGCCACCACACACCTCACATAAACTCCAACCTTTAGACTTGACATATTTTGGCCCTATCAAGATAGCTTACAATCAAGAATGTGAGAATCACATGGCGGATCGATTTGGACAGCCCATCACACAATACGACATAGTAGAATTGTTTACGAATGCTTTTAATCGATGCAGTAACCTTCAAAAAGCAGCAAGTGGATTTAGATCTGCAGGAATATATCCCTTGCGCCCCATTGAGTTCGATCCAAACATATCCCAAGATAACTCACAGACAACAATAAATCCACCACAAAATGATATGAATACCCAACTCTCAAATAACCAAGAAACTGAAGTTCAACAAGTTCCTAATGCTGATACGACTGCAGTAACCCAAGTTCACAATGTTGAAGATTTTAATGTCCAGGCATCCGATGCAGGTCTTGCTAATTCACAAATCGAAAATACAAGCACACAAGAAGTTCATCTATCCGATATTGTTGAATTGCCTGTGATTAATCCAAAAGTATCAAAACGCAATATTAGGAAGAGAAAATCTACCATTCTGACGAGCTCACCTATAAAAGAGCAGTTAGAAGAAAAGGAAAACAGAAAAAGAGCAAAAGCAGAAGAAAGCAaggaaaaaccaaaaaaaaaaacaaataaaggaTCTCAAATAAAAAGACTGAAACGTAGTGATAAGAAACCTTTGAAAAAAGAAATTAAAGGAGTataa
- Protein Sequence
- MPRNYKRKTVTKYSLEDLKKAINDVQTNKLTIGKAAETYNIPKTTIFDHLKKPVIKLPIAGRKTLFTGEQEAELVDYIIKCSKLYYGLTIKKIRRIAYQYAEMNKLPHNFDRVKQLAGKDWYYSFMKRHPSLSLRTPEATSLNRITAFNETDVQVFYDNLKAIQEKYHIQPDKMFNVDETGISTVQKNQKMVAVRGQKQVGKATSAERGSTTTVVCAFSAAGQYIPPFFIFKRKRMNPLLLKGSNPNMIGAVSDSGWINESLFVDWLHHFISYAKPSKEDPVLLILDNHESHISLDAYSLCREHGIIMLTLPPHTSHKLQPLDLTYFGPIKIAYNQECENHMADRFGQPITQYDIVELFTNAFNRCSNLQKAASGFRSAGIYPLRPIEFDPNISQDNSQTTINPPQNDMNTQLSNNQETEVQQVPNADTTAVTQVHNVEDFNVQASDAGLANSQIENTSTQEVHLSDIVELPVINPKVSKRNIRKRKSTILTSSPIKEQLEEKENRKRAKAEESKEKPKKKTNKGSQIKRLKRSDKKPLKKEIKGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843457;
- 90% Identity
- iTF_00162600; iTF_00162673; iTF_00162619; iTF_00162623; iTF_00162624; iTF_00843457; iTF_01090682; iTF_01161297; iTF_01090683; iTF_01090684; iTF_01090685; iTF_01090686;
- 80% Identity
- -