Agoe066006.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463820.1:8283748-8284104[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-09 1.9e-06 30.2 0.1 4 39 16 50 15 56 0.83
Sequence Information
- Coding Sequence
- ATGGAACCACCTCCTAAGAAGAAACGAGGTTCGTGGACACTGAAACAACTAGAAGATGCTATGACTGCCGTCCGGGGAGGAATGTCACGACGTGCAGCAGCCGCGCGTTATTCTATTCCCAGAAGAACTTTAGTCAATCatttgaaaagtggcaaagtcgAAAAACAAATTGGGCGTCGTACAATTTTAACAAAAGAGCAAGAGACTGATTTGGCCACGCGAATAAAAAGACTTGCTGCTGTAGGCTTACCGTTAAAACATAATCAATTCGACACCAATCTTACGTTTTTTGTGACGAAAATGACATTCCAAACAAATTTAATCGCTCCAAAAAACGAGCAGGAAAGGATTGgttaa
- Protein Sequence
- MEPPPKKKRGSWTLKQLEDAMTAVRGGMSRRAAAARYSIPRRTLVNHLKSGKVEKQIGRRTILTKEQETDLATRIKRLAAVGLPLKHNQFDTNLTFFVTKMTFQTNLIAPKNEQERIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162519;
- 90% Identity
- -
- 80% Identity
- -