Agoe047465.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463815.1:19278404-19279027[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-09 1.5e-06 30.6 0.0 1 41 14 54 14 57 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACtattcttacaaaacaattagAAGAAGATTTATCGCAGCGAATCAATCGTTTTGCAAAACTGGGTGTACCACTTACGCCTAAATTTATCAGGAAACAAGCCTTTTTATTTTGTGAGAGGTTTAAAATCAAGCACTCGTTCAATATGTCAACAAGAATGGCTGGACGCAAATGGCTCAAAATGTTTTTGGCTCGAAACCGATCAATATCAAAAAGAAAACCCCAGCTAATGAATCCAGCTAGAGCTCAAAAAATGAATAAGCCCATTGTGAAAAACCATTTTGAAGAAGTGAAGAAACTCTATGAAGAGCTAGACATTATTGCACATCCAGAACGCTTGTATAACATGGATGAAAAAGGGTGTCGCATTACGGTCCACAAACAAACTGTAGTTTTGGCTGAAAAAGGGAATACAAGAGTACATCTTGTTGCTCCGTAA
- Protein Sequence
- MSESKPRKRGSTWDEDSLRRAMEAVQNNQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILTKQLEEDLSQRINRFAKLGVPLTPKFIRKQAFLFCERFKIKHSFNMSTRMAGRKWLKMFLARNRSISKRKPQLMNPARAQKMNKPIVKNHFEEVKKLYEELDIIAHPERLYNMDEKGCRITVHKQTVVLAEKGNTRVHLVAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162594; iTF_01208066; iTF_01208068; iTF_00850631; iTF_00382521; iTF_00281118; iTF_01091647;
- 90% Identity
- iTF_01083265;
- 80% Identity
- -