Agoe098603.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463829.1:26351380-26351703[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-10 4.1e-07 32.4 0.0 1 41 14 54 14 57 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACtattcttacaaaacaattagAAGAAGATTTATCGCAGCGAATCAAACGTTTTGCAAAACTGGGTGTACCACTTACGCCTAAATTTATCAGGAAACAAGCCTTTTTATTTTGTGAGAGGTTTAAAATCAAGCACTAG
- Protein Sequence
- MSESKPRKRGSTWDEDSLRRAMEAVQNNQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILTKQLEEDLSQRIKRFAKLGVPLTPKFIRKQAFLFCERFKIKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00810936; iTF_00256800;
- 90% Identity
- iTF_01564588;
- 80% Identity
- -