Agoe051213.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463816.1:20728228-20729301[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 5.4e-07 32.0 0.1 4 39 16 50 15 56 0.83 2 2 9.9 4.2e+03 0.3 0.0 28 44 242 259 241 260 0.86
Sequence Information
- Coding Sequence
- ATGGAACCACCTCCTAAGAAGAAACGAGGTTCGTGGACACTGAAACAACTAGAAGATGCTATGACTGCCGTCCGGGGAGGAATGTCACAACGTGCAGCAGCCGCGCGTTATTCTATTCCCAGAAGAACTTTAGTCAATCatttgaaaagtggcaaagtcgAAAAACAAATTGGGCGTCGTACAATTTTAACAAAAGAGCAAGAGACTGATTTGGCCACGCGAATAAAAAGACTTGCTACTGTAGGCTTACCGTTAAAACCAAAATCAATTCGACACCAAGCTTACGTTTTTTGTGACGAAAATGACATTCCAAACAAATTTAATCGCTCCAAAAAACGAGCAGGAAAGGATTGgttaaaattgtatttgaagCGAAACTCCGATATGTCAAAGCGAAAGGTACAGATCTTAAATCCAGGAAGGGCTCAGAAAGTTAATAAACCAATCGTAAATCAGCACTTTaacgaatataaaaaaatatacaaagaaCTGATTAGAGAGAGCCCCGGACGTCTATATAATATGGATGAAAAAGGTTGTAGGTTAACCATACATAATCAACCAGTGGTCTTAACAGAAAAAGGGGCTAAAAATGTGCCCTTGGTTGCACCAGAGCACGCAGAAAACGTAACTATTGCCATGTGCGTAAATGCAGTAGGCACTGCTATCCCGCCGATGATACTGTTTAAGGGGAAGAGAATGAAGCCAGAATTCAATGATAATTTGCCATCTGGATCATTGGTACGAATGGCAAAAAAAGGGTCCATGACAACGTCTCTGTTTACAGAATTCATCCATCACTTGGGAAAGTACAAAACTCCCGGCAAGTGTTTACTTGTTTTTGATGGCGCTTCTTGCCACTTTGATTATAGTATTGTAGACGCAGCGGAGAAAGAAAATATAGTTTTATACTGTTTGCCATCCAACACCACTCACTGGCTCCAGCCACTTGACAGAAGTGTCAACAAATCATTTGAGGTTTACTGGGATGAAGAAGCTTTATCATATCTGTACCAATACCCCGGCAGAACAATTACCAAAGCCAGATTCAATTCCATCTTAAGCAAAATATAG
- Protein Sequence
- MEPPPKKKRGSWTLKQLEDAMTAVRGGMSQRAAAARYSIPRRTLVNHLKSGKVEKQIGRRTILTKEQETDLATRIKRLATVGLPLKPKSIRHQAYVFCDENDIPNKFNRSKKRAGKDWLKLYLKRNSDMSKRKVQILNPGRAQKVNKPIVNQHFNEYKKIYKELIRESPGRLYNMDEKGCRLTIHNQPVVLTEKGAKNVPLVAPEHAENVTIAMCVNAVGTAIPPMILFKGKRMKPEFNDNLPSGSLVRMAKKGSMTTSLFTEFIHHLGKYKTPGKCLLVFDGASCHFDYSIVDAAEKENIVLYCLPSNTTHWLQPLDRSVNKSFEVYWDEEALSYLYQYPGRTITKARFNSILSKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162541;
- 90% Identity
- iTF_00162541;
- 80% Identity
- -