Agoe028434.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- -
- Assembly
- GCA_949825045.1
- Location
- OX463811.1:13663108-13663905[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-11 6.2e-09 38.2 0.0 4 42 23 61 20 63 0.90
Sequence Information
- Coding Sequence
- ATGCCGGCCCAATCAAAACTGGCAAAGGatcaagaaaaagaaaaacgtTTGCAATACGACCGGAGTCGAATAAAAGATGCAGTAAATGCCGTAACAAATCAAAATCTGAGCATCAGAGAAGCTTCTCGACTATACGACATTCCGAGGACCACTTTACAAGACAGACTTCATGGAAGAGTAGACACAGACTGCACAGTTGGTAGAGAAACCGTGTTAAACCAAAATGAAGAAGAAGCAATTGTTCAATGGTTGATACGGATGGCTATCTGTGGTTTCCCCAGAACACGAAGTAATGTGTTAAATACagttaaaaatataatcaaagaagATAAAAGACCCAATCCGTTTAAAGATGGAAAACCAGGAAAAAAATGGTATTccttgtttttaaaaagacacCCAATTCTGAACGAAAGGGCTCCAGAAGCTATTACACTGGCCAGGGCTGTAGTTACAGAAGAATATATCAGAAAGTGGTTTAATGACCTACAAGAGCATTTAAAATCAATCGGACATGAAGACATATTAAACGATCCGCAGAGGGTATTTAACGGGGACGAGACAAGCTTTAGTATTTGCCCGAAGACAGGGAAAGTAATAGCACCCAAGGGATGGAAGAACATTTATGAAATTGCAAAGGGCAGTGAGAAAGAAACTATAACTGTTTTAATGGTCATATCTGCTGCAGGAGTAACTTTGCCCCCCATGGTTGTTTTCCCTTACATCCGTAGACCACCAAAAGAAATCGTAAAAAGCGTACCACCCTCCTGGTTTATTGGCTTATCGGAAAGTGGGTGA
- Protein Sequence
- MPAQSKLAKDQEKEKRLQYDRSRIKDAVNAVTNQNLSIREASRLYDIPRTTLQDRLHGRVDTDCTVGRETVLNQNEEEAIVQWLIRMAICGFPRTRSNVLNTVKNIIKEDKRPNPFKDGKPGKKWYSLFLKRHPILNERAPEAITLARAVVTEEYIRKWFNDLQEHLKSIGHEDILNDPQRVFNGDETSFSICPKTGKVIAPKGWKNIYEIAKGSEKETITVLMVISAAGVTLPPMVVFPYIRRPPKEIVKSVPPSWFIGLSESG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00162605; iTF_00162456; iTF_00428923;
- 90% Identity
- iTF_00162605; iTF_00162456;
- 80% Identity
- -