Agoe104353.1
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- mbr-1
- Assembly
- GCA_949825045.1
- Location
- OX463831.1:20105967-20136139[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-15 1.8e-12 49.5 0.0 1 40 106 146 106 151 0.92 2 2 1.2e-17 4.9e-15 57.7 0.0 1 43 307 350 307 352 0.95
Sequence Information
- Coding Sequence
- ATGATGATGAGAATAAAGAGTGCGTGTGTTCAGTTCCAACAGATGATGGCAGCTCTGGCAGCGCTGAACAGTGGCCTGGTGCCGCCGGCTCTGTCGCAGGCGTGGCTGATGCAACGACTGGTGCAGAATAGACAGACTGTGGACAGAGTACCATCGGTCGTGGAGAAGCCATGCAACGAATCGCCCCTGGGTGAGCAGCCACTGGACCTCAGCGCCAAGTCAAGCAGTACTGGAGGCAGCCCGCCACCAGAAAACTCCAGACCAAAAAAAACCGTGTTGGAGTCGTCAAGCACGGGAGTCGCACGACGCGCATACAGCGAAGACGACCTACAAGCCGCCGTCCGAGATATTCGCAGCGGCAAGCTGGGCACCAGGCGAGCTTCTGTGGTGTACGGCATACCCCGCTCTACGTTGAGGAATAAGGTGTACAAGCTGGCGTCCCCGACGTCGCCGCCGCCGGCCGACAGCGACCCCGACAGTGAACCAGAAAGAGACTCGCCTCCTGGTGTTATCCTGAAGATACCTACATTCCCGCTGCCGGATGAGAAACCTCCCTCCCCAGCCACCCCTGGCACGACACCTGTGACGCCGCTCTTGCCCCCAAGAGCGCCACAGCCGCTGCTCCTCCCGCCGTCAGTGTTCGCCGACCCACCCAACTCGCACCTCTTCACCTCGATAAGCGATGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCGCAGGACCTCGACTACCTGCGGCGCGCCGAGCGTCATGTGTCTGTCATCAAGACGCCGCCTGACAATCACCAGCGCCACCACCACGCGCCACACTTCCCCGCGCCGGGCAACTCGCGTGCGCCGCCCAGCAACAACGGCCAGCAGGCACTCGGCGGCAAGGGTACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGCCTCGTGGAGGCGGTGAAGGCTGTGCAGCGCGGCGAGATGTCCGTGCACCGTGCTGGCTCCTATTATGGCGTGCCGCACTCTACGCTCGAGTACAAGGTGAAGGAGCGCCACCTGATGAGGCCGCGCAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAAGCCGCCGCCCAAGCCGCCGCAGAAGCCGCCCCCGAAGCCCTTCACGAACGGCATGAACGGGCCCGACGCGCCCGGCTACCCGCCCGGCTACCCATTCTGGGCAGCGCCCGGGTTCGCACCGCAGCCTCCAACGCCGAATGATCTGTATGCGTCGCACATGATGCGGCGGCTGCGCGACGAGGCGCCACCCGCCAACGGCTCCTTCCTCGAGGGGATCATCCGGTCGAGCCTCGAGCGGCCCGGCGCCGCGCTGCTGCAGAGGCTGACGGAGCCGCGCGGGGTGCCGGGTGCGGCGGAGGCGCCGAGCCTGCTGCGGCGGCTGGCGGGGTCGCCGGGTGCGGgtggggcgggcggggcgggcgtGGCGGCGGCGGACGGCCCGCCTGCGCGGCGCGCGCGATTAGGCAGCGGCGACCGGCAGCTCGCGGCGGAGATGCGCGAGACCATTCAGCGCCTGCGCGCTGACAAGCAGCGCCGCGCCAGCCCGTCCCCGCCACCCGCGCCCGCCCCGCCTGCGCCCGCGCctgcgcccccgccgcccgctgAGCGCGCCTAG
- Protein Sequence
- MMMRIKSACVQFQQMMAALAALNSGLVPPALSQAWLMQRLVQNRQTVDRVPSVVEKPCNESPLGEQPLDLSAKSSSTGGSPPPENSRPKKTVLESSSTGVARRAYSEDDLQAAVRDIRSGKLGTRRASVVYGIPRSTLRNKVYKLASPTSPPPADSDPDSEPERDSPPGVILKIPTFPLPDEKPPSPATPGTTPVTPLLPPRAPQPLLLPPSVFADPPNSHLFTSISDVIAKSISQKFQQPQDLDYLRRAERHVSVIKTPPDNHQRHHHAPHFPAPGNSRAPPSNNGQQALGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAKPPPKPPQKPPPKPFTNGMNGPDAPGYPPGYPFWAAPGFAPQPPTPNDLYASHMMRRLRDEAPPANGSFLEGIIRSSLERPGAALLQRLTEPRGVPGAAEAPSLLRRLAGSPGAGGAGGAGVAAADGPPARRARLGSGDRQLAAEMRETIQRLRADKQRRASPSPPPAPAPPAPAPAPPPPAERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -