Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735269.1:7883661-7897486[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.11 6.7 7.9 0.5 2 23 452 474 451 474 0.93

2 8 4.7e-06 0.00027 21.7 2.8 2 23 478 499 477 499 0.97

3 8 4.2e-05 0.0024 18.7 2.3 2 23 507 528 506 528 0.96

4 8 1.4 84 4.5 0.3 2 23 551 571 551 571 0.74

5 8 0.0014 0.081 14.0 2.3 1 23 578 601 578 601 0.96

6 8 1.2e-05 0.0007 20.4 3.6 1 23 608 631 608 631 0.97

7 8 0.0014 0.079 14.0 0.2 1 20 643 662 643 664 0.93

8 8 0.049 2.8 9.1 1.5 1 21 680 700 680 701 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.11	6.7	7.9	0.5	2	23	452	474	451	474	0.93
2	8	4.7e-06	0.00027	21.7	2.8	2	23	478	499	477	499	0.97
3	8	4.2e-05	0.0024	18.7	2.3	2	23	507	528	506	528	0.96
4	8	1.4	84	4.5	0.3	2	23	551	571	551	571	0.74
5	8	0.0014	0.081	14.0	2.3	1	23	578	601	578	601	0.96
6	8	1.2e-05	0.0007	20.4	3.6	1	23	608	631	608	631	0.97
7	8	0.0014	0.079	14.0	0.2	1	20	643	662	643	664	0.93
8	8	0.049	2.8	9.1	1.5	1	21	680	700	680	701	0.95

Sequence Information

Coding Sequence: ATGGATGGAGTTGCCTTCTGCCGGGGCTGTCTCAGCCGGCATGACGAGCCTGATGACCTGATCCAGTATACTGAGAAGAACAGGAGACAGTTTGTGTACAGCACTGGGTTGCAGGTGAAAAGAAACGATAACTTTACATTCCAACTGTGTAAGGAGTGCTACCTCAATATGAAGATGGGCTGTAAGTTCAAAAAGCAATGTAGAGCCTCTGACAAGAGGTTTAGGACATACATTGGCTTAAAGGAAGCTGGGGCCACAGAAGACTTGGCTACATTTCTTGCAAAAGATGGTGATATGTTTAGATTCCCATTTATCAGTGGCGGGATCACACCGTCATATCAAAAAGCCAAAGAAGATGATAATGAATCCACAAACACCTCAATCCGCAACTTCATGACCGGCTTGGTTCAGCCGGAAGACCTCTTAGATTCCGAGGCCAAGATTGTCAGTGAGGTGATAGCCGAGGAAGCTGACATCCTCGAAGACTCGCTCGACTCACTGTGGCTTCAGGATGACCCGTCTATAGACCCTGAGATGAATATGGATATCAgTTTCAGCGCTTTCTCAACACCGCGAGTGTTAAACGAAGACCGATGCCTCACGCCCCGAAAGATGGACGAAAAAAACCCAGAAATTCCTATGAATATAGACTATAATAATGGACAACCGTTTCAATTTGCGTCTAAATACTTACCAAATGTATACGCCGATTTCATAGTAGCTCCCGATGTCGAAGAAACCAAAATTGCTCCTAAAAGCATTACAAAGTCATCTGTTCCCCCAAGAAAAACCCTCAAGAGTATGCCAGATTTGGACTCAATGATTACTGGCGATAGTCAACCCAAATTCAAGTTGGGTAAGAAAATTGTTCAGCTAGAAGACAGTGTGCAAGTGGATATGAATATTCCAAGAGATTCTATTGATAAGAATTTAAAGAAGGCTTTGAACGACGATGAAGCTGACGCGTTTTCGCTCAGCGAGTTACTAGTTTCACCAGCTCCTCCAGCAATGCCACATGCCTCGCCGTCACCATCGATCAAAAGCATATTATTCGGTCACGACCAGGCTGCCGATGATTGTAATTATAAATATAGCgcatcaatgtccccaccgaggggcaagcGCTTTTACCAGGATACTGAACTAGCACACTCGTCAAAACCATTACCCAGGATACAAATCATAGAAGATACCACCGTTAAAACCGAACCCATCGACTATAATCGAGATATTGTGGATGATATTTTGAAAGAAGCCAGCGCGGATCTCGATCTGCCGCCATTGAAACTCAACTTCTATGTTGATACACAACAGCAGGAAATAGTTAGTGATCAAACGAAGGAACCAGGTAAAGTCTGTAAAATTTGCGATATAACTTTTGGAAGCGTTTTTGAAAAGAGACAACATCGCAAGGAGGCTCATCTCAAAATTCAGTGTGACAAATGTAACAAGAAGTATTATGATAAAAGCAACTTTAAGCGACATCTGTTAACGCACGAGAAGAAATTAGAATACTGTATGTGTGACGTGTGCCAGCGTACTTTCGCAAGCAAGGCAAAGTTGCTTCAACATCTGAGAACGCATGCGCCGTTCAGAAACCTGCCTCAAGAATCATTTGCTAGATATCCAAAGCAAGTGCACAAGTTAAGGGTTTGTCCTATATGCGATAGGACCATCAAGGGCCAAAACTATTATACACATGTAAAGAGGCATGACGCTTCACTGATCACGCATCCATGCATGTTTTGTGACAAAGGATTCCATAGACGAACCGAACTGAGTAACCATATTGCGACTATACATCGTACTGAGTTGATTACGCATCCATGTCATATATGTGAGCAAAAATTCTCGAGCAGTAATTCACTGATCCGACATATACGGCGAAACCATACCGatattCCAATGCCCAAATTGAGGAAAAAGTTCCAATGCGCACATTGTGACGAAACGTTTTCTTCTTTAAAAAATGTAGATGTCCACATCGCAAAATCAAGGAAGTGCAAGAAAATCCGCGAGCAAATTATATCGGCTGAATTCCGATGTCGGTTTTGTAACCGCAAGTTTCTTAAAAAGGGGGATCTCAACGTACACCTAAAAAGCACAGAGGCATGCTTGACTATGCGTAATGTTGGGATTACACCAGACGTGTCCTGCAGGCTCTGTGAAAGATTTCTGGGAGCAGGCTTGATGCTTGAAAGACACAAAACAGCTTGCCTTAGAGAACTCGAGCGAACTGCAGCGAGAGAATCAGGTTAG
Protein Sequence: MDGVAFCRGCLSRHDEPDDLIQYTEKNRRQFVYSTGLQVKRNDNFTFQLCKECYLNMKMGCKFKKQCRASDKRFRTYIGLKEAGATEDLATFLAKDGDMFRFPFISGGITPSYQKAKEDDNESTNTSIRNFMTGLVQPEDLLDSEAKIVSEVIAEEADILEDSLDSLWLQDDPSIDPEMNMDISFSAFSTPRVLNEDRCLTPRKMDEKNPEIPMNIDYNNGQPFQFASKYLPNVYADFIVAPDVEETKIAPKSITKSSVPPRKTLKSMPDLDSMITGDSQPKFKLGKKIVQLEDSVQVDMNIPRDSIDKNLKKALNDDEADAFSLSELLVSPAPPAMPHASPSPSIKSILFGHDQAADDCNYKYSASMSPPRGKRFYQDTELAHSSKPLPRIQIIEDTTVKTEPIDYNRDIVDDILKEASADLDLPPLKLNFYVDTQQQEIVSDQTKEPGKVCKICDITFGSVFEKRQHRKEAHLKIQCDKCNKKYYDKSNFKRHLLTHEKKLEYCMCDVCQRTFASKAKLLQHLRTHAPFRNLPQESFARYPKQVHKLRVCPICDRTIKGQNYYTHVKRHDASLITHPCMFCDKGFHRRTELSNHIATIHRTELITHPCHICEQKFSSSNSLIRHIRRNHTDIPMPKLRKKFQCAHCDETFSSLKNVDVHIAKSRKCKKIREQIISAEFRCRFCNRKFLKKGDLNVHLKSTEACLTMRNVGITPDVSCRLCERFLGAGLMLERHKTACLRELERTAARESG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -