Aalb020836.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735277.1:3278699-3280901[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 6.9 4e+02 2.3 1.8 3 23 241 262 239 262 0.91 2 12 0.0014 0.079 14.0 1.2 1 23 268 291 268 291 0.98 3 12 0.011 0.66 11.1 0.3 3 19 297 313 295 315 0.91 4 12 0.0014 0.081 13.9 0.4 1 23 325 347 325 347 0.98 5 12 0.046 2.7 9.2 0.1 1 23 353 376 353 376 0.95 6 12 0.00064 0.037 15.0 4.4 1 23 388 410 388 410 0.98 7 12 3e-05 0.0018 19.2 2.1 1 23 416 440 416 440 0.92 8 12 0.00078 0.045 14.7 0.8 1 23 452 475 452 475 0.94 9 12 0.00012 0.0071 17.3 1.1 1 23 481 504 481 504 0.92 10 12 0.065 3.8 8.7 0.0 1 23 509 531 509 531 0.97 11 12 0.0018 0.11 13.6 0.4 1 23 537 560 537 560 0.96 12 12 0.055 3.2 8.9 2.3 2 23 566 588 565 588 0.96
Sequence Information
- Coding Sequence
- ATGTTTGACATAGTCATAATGAACGATGATGATACCGACTATAAATTCACCGAATACAAGAGGCTGAAGTTGCAACTGAATAACCTTCTCCACTGCGCTACGCAATATTGTGGGATTTGCCTCTCTACCGGCAAGCTATCGTACTATTCTCTTTATGACCCAGTAGACACGGGACATTGGCAAGGCGAAACTCTGGTCACATTGCTAACTATTCTGCAGACGTTTTTTGGGGACATGCATTCCTTTGCATCAAGCAGCATCTGTGAAGATTGCCGAGTATGCGCCATCAGTGCATATTTGTTTGTCTACAACACAAAACGCACCAGTGATATTATTAAGGATTATGTCCATCAGATGGATGCTGGCCTTGATGAAATCTACAAGGAAATGGATGAATCTAATATGGACCAATTTGCAAACACATTGATTGTTTTACAAGATCCTACTGCTACAAAGGAAGACCCTTCGGCTGATGAAACTGAGATTgattataatgatgatattgatgaaaATTGTGATGAAGATAGCTTTACTCAAGTTTCTGATACTGAAACTGAAATAACTGAGCGATCTGTAAAAACATGCATCCTCAGTAATTCTGCTAAAGATCAAAAAAATCGTTACCAGTCATGTTTTGAATGTAAAGAGGCAGTCTGCATGCATCACAAATACCTGGTCTCATACACAGCGCAGAGAACAGCTGGCAAGAAGAAAATATGCTGCCCTCAATGCAAATACGTCTGTTGGACCAAACTACAGCTTATCGGACATGCTAACAAAATACACTTGAATAACTACAACTTTGTTTGTGAGTACTGTGCCAAGCCATTGTACTCAAAATATTCCTACAACACTCATGTCAGAACATACCACAAGGAGCAGATAATTTGTGAATACTGCAACAAACCATTCTCGAGCACACACACTTATGTAATCCACAAGGAAGCCTGCTCTTTGCGGAAGCCGAAAACATACCGGTGTAATGAATGTCCATCGTCTTTCGCCACAGAGGTCAAATGGAAGAACCACAAACAAATACACTCCAAAGATAACAGATACCCATGTGATCTTTGTAATAGAGTAGTATCCAGTGAAGCCATTCTAAAGAAACATCATGAAGTGGTCCATTCAGATGAGATAGTGAGTAAACTGAGGAACCAATATGAATGCTCAATATGCCACATGAAATTCTCAACCctcaaagaaaagaaaaatcaCATGAAAAACCACAGTCTAGATGAGAAACACCAGTGCGTGGAATGCAACAAATCATTCAACTCACAATACCAGTACAGAAACCATGTAAATACAGCAGAACATAGACTTAAAACTAATTGTAATGAAGCCTTGTCACACAAATGTTCAGAGTGTGACTTTTCAACCATCTCATCTAGCAAATTGGAAGCCCATGTCAACGGGCAACATTTAAAGATCGCCCCATACATTTGTGAACAGTGTGGTCGGAAGTTCACAAGCAAAAATACATTAGCACAGCACAACCAGCTAAAACACGGCAACAAGAAGTATCCATGCAGCATTTGCGGCAACCTCCTTGGATCCAACATTGCGCTGATCAAACATGTCCGATTACACACGGGAGAACGACCTTATCCTTGTGATTTATGCCCAGAAAAGTTTGTCTCTGCGAGCCACAGAAACATACACAAACTCCGAGCCCACGGAGAGAAGAATATAAAATGTCCATTGTGTGAAAACATGTTCCATACCATCAGCAATATGAGGGTGCATTTTAAGAAACGGCACTGGATATCGAAGGACGAGAAGTTTGATATATGGAAAGTAGAAGGATTGAAGCCGGAAGACTATGAAATGTTTCGGGATAAACGGCAACTGGACTTTTGCAACCCTGAGTTCATGCAGGATTGA
- Protein Sequence
- MFDIVIMNDDDTDYKFTEYKRLKLQLNNLLHCATQYCGICLSTGKLSYYSLYDPVDTGHWQGETLVTLLTILQTFFGDMHSFASSSICEDCRVCAISAYLFVYNTKRTSDIIKDYVHQMDAGLDEIYKEMDESNMDQFANTLIVLQDPTATKEDPSADETEIDYNDDIDENCDEDSFTQVSDTETEITERSVKTCILSNSAKDQKNRYQSCFECKEAVCMHHKYLVSYTAQRTAGKKKICCPQCKYVCWTKLQLIGHANKIHLNNYNFVCEYCAKPLYSKYSYNTHVRTYHKEQIICEYCNKPFSSTHTYVIHKEACSLRKPKTYRCNECPSSFATEVKWKNHKQIHSKDNRYPCDLCNRVVSSEAILKKHHEVVHSDEIVSKLRNQYECSICHMKFSTLKEKKNHMKNHSLDEKHQCVECNKSFNSQYQYRNHVNTAEHRLKTNCNEALSHKCSECDFSTISSSKLEAHVNGQHLKIAPYICEQCGRKFTSKNTLAQHNQLKHGNKKYPCSICGNLLGSNIALIKHVRLHTGERPYPCDLCPEKFVSASHRNIHKLRAHGEKNIKCPLCENMFHTISNMRVHFKKRHWISKDEKFDIWKVEGLKPEDYEMFRDKRQLDFCNPEFMQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00163674;
- 90% Identity
- -
- 80% Identity
- -