Aalb022418.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- Znf131
- Assembly
- GCA_963457715.1
- Location
- OY735280.1:2933372-2950352[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.17 9.6 7.4 0.6 2 21 243 262 243 265 0.88 2 13 0.00037 0.021 15.8 0.4 1 23 272 294 272 294 0.95 3 13 0.0042 0.24 12.4 0.4 2 21 336 355 335 356 0.92 4 13 0.0036 0.21 12.7 2.9 1 23 360 382 360 382 0.99 5 13 0.082 4.8 8.4 2.2 1 23 426 449 426 449 0.96 6 13 0.0055 0.32 12.1 0.5 1 23 455 478 455 478 0.96 7 13 8e-06 0.00046 21.0 1.4 3 23 491 511 490 511 0.97 8 13 3.7e-05 0.0021 18.9 2.2 1 23 517 539 517 539 0.98 9 13 0.0011 0.061 14.3 1.8 1 23 578 601 578 601 0.96 10 13 0.15 8.9 7.5 4.9 1 23 607 629 607 630 0.94 11 13 0.47 27 6.0 0.2 1 16 638 653 638 655 0.87 12 13 0.33 19 6.5 0.1 8 23 701 716 700 716 0.89 13 13 6.2e-05 0.0036 18.2 0.0 1 23 722 745 722 745 0.95
Sequence Information
- Coding Sequence
- ATGAGTGCGTCGTGCGCTCTATGTTTGTCGAATGACAGAAAGCTGACTGCGGTCACCGACATACAACTGCAGGTCCTATGTGCTGCGTTTGATGTCGATTATATTGAGTACATCAATCAACTTCAGTACCGGTTGCTATTGCTCGTCTGTTGGGAGTGCCGCGCCAGGGTACAGAGCTTCCACAACTTTACTCGGCGAGCTCAACAGTGCACAAAGTTGCTGAAAGATCACCTCGACTGTCCTGCAAATGTGTTCCCGGCAGCGGTTTCCACATTGGCATTCGCGCACACCCGCACAACGAATCTGGTACCGGTCACGGAAGCGACGGAACCATCGAGTGAAGAAGTCTTTCTCGACGTCAAAGTTAAGTTGGAGAAGGAAGAAGAAATAAAACCAGAGGTTGCATCAAGTCGTCTTGATGTTGTCGGCTTCAACGATGACGTCGGCTTCAACGATGACGTCGGCTTCAACGATGACGTCGGCTTCAACGATGACGTCGGCTTCAACGATGACGTCGGCTTCAACGATGATGAGTTCCAACCGCAGCCGTTATACAGCTTCAGCTTCGCAGACGTGAAACAAGACATGCCTGGCACTAGCGCGGGAAAGGGACAGAAGAAGAAGAGGTCCGGTCGCCCGTCGAACAAATGGAAGACATTCTGGCTCTCACATGATCAAGCGCTCAAACGCTACCGCGAGCAGCGGGCGTCGGAGCGCGGGCGCGAGCAGTGCGCCGAATGTTCGCGCCGGTTCGCGAGCACGGAAGAGCTGTGTGGCCACGCGACCGACTGGCATTGTGAGAAGGAGGGCACGTTCGCGTGCAGCGTCTGTCAATACCGATTCGCAAAGAAGACGTCACTTAAAGAGCACATAGCAGAACACTTCCGCCGCTACAAGTGTAGGATGTGCGAGTTCGGATCTGACGCGCTGCCGACGATGAAGGCGCATTGTGGCGACAAGCATGCGGCGGAAGAGATGACGCATGCGCCGTATGCAAGCAAGCTCAAGTGTAATAGGTGTAAGGAAACATTTGTAGACACAAAAGCCCTCCGCGCCCACAAGTTAACCTGCAAGCTCTACCGCTGCGTGCAATGCAACTTAACCTTCAAGTACAACCAAGCGTACTACGAACACAAGCGGACGCACTCGACGTCGGCGGACGTGTTGCGTCGCGAGTTGTTCTGCGCGAGTTGTTGCATGCAGTTCAAGAGTGTGGGCTCGTATCGGTACCACATGAAGAACAGCCTGAGCCACGTGCGGCGGGACGAGATGCGACACGTCTGTCCACACTGCGGCGTGCGGCGCGCCACCATGATGCGACTGAAGCAGCACATCAACAGCAAACACCTCAAGACTGGCAGGTTCAAGTGCACTTTATGCGCGCGCGCGTTCGTCACGAAGATCCTGATGCTGCGCCACCGCACCAGCGCGCACAGCACCGGCGAGTACGTGCTGAGCAAGGACAAGATATGCGAGCTGTGCGGGAAAGGATTCTCGTCGAACCACCTGCTGAACAACCACAGGCGCGTCCACACTGGCGAGCGCCCCTTCCAGTGCACGCAGTGCGATGCGCGCTTCGCACAGAGCGGCTCGCTACACACGCACATGAAGCAACACGCGCGCAGACGCGCGCGCGAGAGTGAAGGCGCCCCGGCGCGACGAGCGAGGAGACCTGACCCCGCCGAGAAACTCCTTTTGACTGACTGCCGTCTGTCTGCCAATCGTGACAGCTACAAGTGCGCCGAGTGCGAGCGCCGCTTCGTGTCGCCCGCGGAGCAGCAGCGCCACCACCGCTTCCAGCACCTCAAGATATCCGACCACAAGTGCGAGATCTGCTGCAAGATCTTCATCTCGGCGAACAGCCTGAACGCGCACAACTCGCGCCACCACGGCAAGCACAGCGAGCGGGAGTTCGCGTGCAACGAGTGCGGAAAACTGTACACGGTGAGGGACAAACTGTACACGGTGAGGGACAAACTGTACACGGTGAGGGACAAACTGTACACGGTGAGGGACAAACTGTACACGGTGAGGGACAAACTGTACACGGTGAGGGACAAACTGTACACGGTGAGGGAAAAACTGTACACGGTGAGGGACAAACTGTACAcgTCGATGTCGAACCTGCGCGTGCACATGCTGATCCACGGCTCGGAGCGCCGCTACAAGTGCGCCGAGTGTGGCGCCGCCTTCAAGCAGCCCTCGCCGCTCAACGCGCACGTCAAGTTCGTGCACAACAAGGAGACCCGCCCGACGTACGAGCGACGCACGAAGCGCGTGCGCAAACGGCACACAGACGCACGGGACACGCACACACTCACGCAAGAGGCGTGA
- Protein Sequence
- MSASCALCLSNDRKLTAVTDIQLQVLCAAFDVDYIEYINQLQYRLLLLVCWECRARVQSFHNFTRRAQQCTKLLKDHLDCPANVFPAAVSTLAFAHTRTTNLVPVTEATEPSSEEVFLDVKVKLEKEEEIKPEVASSRLDVVGFNDDVGFNDDVGFNDDVGFNDDVGFNDDVGFNDDEFQPQPLYSFSFADVKQDMPGTSAGKGQKKKRSGRPSNKWKTFWLSHDQALKRYREQRASERGREQCAECSRRFASTEELCGHATDWHCEKEGTFACSVCQYRFAKKTSLKEHIAEHFRRYKCRMCEFGSDALPTMKAHCGDKHAAEEMTHAPYASKLKCNRCKETFVDTKALRAHKLTCKLYRCVQCNLTFKYNQAYYEHKRTHSTSADVLRRELFCASCCMQFKSVGSYRYHMKNSLSHVRRDEMRHVCPHCGVRRATMMRLKQHINSKHLKTGRFKCTLCARAFVTKILMLRHRTSAHSTGEYVLSKDKICELCGKGFSSNHLLNNHRRVHTGERPFQCTQCDARFAQSGSLHTHMKQHARRRARESEGAPARRARRPDPAEKLLLTDCRLSANRDSYKCAECERRFVSPAEQQRHHRFQHLKISDHKCEICCKIFISANSLNAHNSRHHGKHSEREFACNECGKLYTVRDKLYTVRDKLYTVRDKLYTVRDKLYTVRDKLYTVRDKLYTVREKLYTVRDKLYTSMSNLRVHMLIHGSERRYKCAECGAAFKQPSPLNAHVKFVHNKETRPTYERRTKRVRKRHTDARDTHTLTQEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -