Aalb022020.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735279.1:5162334-5172088[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.13 7.4 7.8 0.2 1 23 233 255 233 255 0.98 2 12 5.1 2.9e+02 2.7 0.4 1 23 261 282 261 282 0.88 3 12 0.047 2.7 9.1 0.2 3 20 289 306 287 308 0.93 4 12 0.012 0.67 11.1 2.5 2 23 360 382 359 382 0.90 5 12 0.44 26 6.1 0.7 2 23 417 438 417 438 0.85 6 12 0.015 0.86 10.7 0.0 3 21 945 963 943 964 0.92 7 12 6.4e-06 0.00037 21.3 2.4 2 23 988 1009 987 1009 0.97 8 12 3.8e-06 0.00022 22.0 0.2 1 23 1016 1038 1016 1038 0.98 9 12 2.1e-05 0.0012 19.7 1.0 2 23 1045 1066 1045 1066 0.97 10 12 6.1e-06 0.00035 21.4 1.5 1 23 1072 1094 1072 1094 0.98 11 12 0.0014 0.078 14.0 6.2 1 23 1100 1122 1100 1122 0.96 12 12 6.8e-05 0.0039 18.1 5.2 1 23 1128 1151 1128 1151 0.97
Sequence Information
- Coding Sequence
- ATGAGCGGCGAATACATGAAATGTTGCCTTTGCACCGAGTCAACCGAACACGACTTATTGGACCTTACGGTAAATACTGAAAACTGGCAAGAACTATCCGATAAGCTCTCTATATTCAGTAATATCGACACCAATTTTCTACTGATCAAGGATTCGCCGAATATAATCTGCCAATCGTGTGGTATCGCGTTGGATAATGCCACTGCATTTTATCACAAGGTACAAAACACTGTACTTACTTTGAAACAAGCATTAGTTATTACCATTGAACATGACCAATCCTCAAAGGTCACTTTTGTCAGTACAGATATTGTAGTCAATAATGAATCAGATTTGATCAAATCTGAACCTCTGCAGCTAAACAAGGCAGAGGTTGAAGTTGTTATTGAGAAGATTGAAGAATTGTCCAAAGATTCGGCTGACTTTCCCAACCCAGATGACCTAAAAGGCAAATTAGAGCCTGAAGTCATATGCGAGGAAGATTCAAATGCTGGCAGCATGTCCTTTGAAGATTATGAAACAGACACAAGCAGTGATGAAGAATGTGATGATGATAGTACTGAAGTTGGTAAAAAGGAGTTGAAGAATCCGTCCTGGATGTCGTACACATGGTTGTGCCACCATTGCAATGTACAGAGTACGGGATTGAGCCAGTATAGGGAACACTGCAAAGAGGCACATAATGTGTGCTGCGCTTTCAAATGTGGGGATTGCGAGGATGAGTTTGATAAATATGAAGAGTTCATTGACCATGTGAGGAACCACAATTATTCACTAAGATTCTACTGTCAATACTGCAACCTGAAGCTGGACGCTGCCAATGCCAAGTCCCACCGAGAGGGTCACGTTTTCAATGAGCAGATCTGCCAACACTGCGGCAACATCTTCGATAACATCACCAGCTTGCGACAACACCTGGCCAGGTACAAGCCACAGAAGAAGCCACCGGCCGAACCGTCGGACACCGTCACCATCACAAGACAGCGCCGCGTCAAGAATAGGAAGCCGCCGCCGGCGCTCATCCCGGAGTGGCAGATCAGGAGTATCCAGGACAAATCCTGGCGCGGCTACCAATGGACCTGCAGCGTCTGCAGTATGTCGTTTCATCACGCAGAGCACCTGCGCGCGCACACCGCCGGCACACACCAGGCTTGCTTCGGCATGAAGTGTATCGACTGCGCGGAGCAGCCGGACTGTTATCGGGGCTTCGTGTACCATGTGAGGCGGCACCGACCCTACTTGAAAGGTTATTGCCACTACTGCAACTACAAGTTCGACAAACCGGAGGACGAGGCCGACCACCTAGCTCGACACTTCGACGACCACAACAAGGCAACACACCTGCTACCGGTCTATCACAATGTTAACGTTCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTGCCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTTTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACTGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACTGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTACCGATCTATCACACCTGCTACCGGTCTATCACAATGTTAACGTTCTATCACACCTGCTACCGGTCTATCACAATGTTGACGATCTATCACACCTGCTACCGGTCTATCACATCTGGTACCGATCTATTACACCTGTTACCGATCTATCACACCTGCTACCGGTCTATCACATCTGGTACCGATCTATTACACCTGTTACCGATCTATCACACCTGGACTGCTACTCATGCGGCGTCATATTCCCATCGCGCGAGCAGCTCCAATCCCACATGGACACGTTCAATCCGCCAAAACCAAAATGGCTGCCCTACCTCCGCCCGGAGAAACCGCACACCGTAGAGGATCTAACCTGCCACGTCTGCAAAAAGGTCACAACCACCCCGAGTGGGCTACGAAAGCACATGAACCGCCACACAGAACGCACGAAAGACTACCCGTGTGAAATATGCGGAAATGCATTCTACAGCAAGAGCGCTCTGAACGCGCACCGCAAAACTCACAGCGAAACCAAGTCGGAAGTCTGCGAGATTTGCAAGCAGTCGTTCAAAACTTTAACATACTTGAAGGAGCATATCAAAACGCACTCCGACGAACGCCCGTTCCAATGCGAAGTGTGTAGTAAAGCTTTTAAAAGGAAACGGCAGTTAGAAGAGCATTTTAGGATTCACACAAACGATATGCCTTTCCAGTGCCAGTACTGTCTTAAAGCATTCAGGCATAAGACTAACTTAAAAGTCCACGAGCACCAACATACTGGAGCTCGTCCGTTCTCGTGTACAGATTGCGACAGGAGTTTTAGTAACTGGACGAATTGCAACAAGCATATGAAGAGGAAGCACGGGAAGACCTTGGCAAAGAAGGCGCTGACCGCGCAGGGTAAGCTGCCACTGGACCCGGTGACCGGGAGACCGACGCAGGTGGACGATTCTCTGAGTGTTCAGGAGTGGAAGCAGCAGATGCTAGCTAGGAGGCCAGGGAAGAAGTAG
- Protein Sequence
- MSGEYMKCCLCTESTEHDLLDLTVNTENWQELSDKLSIFSNIDTNFLLIKDSPNIICQSCGIALDNATAFYHKVQNTVLTLKQALVITIEHDQSSKVTFVSTDIVVNNESDLIKSEPLQLNKAEVEVVIEKIEELSKDSADFPNPDDLKGKLEPEVICEEDSNAGSMSFEDYETDTSSDEECDDDSTEVGKKELKNPSWMSYTWLCHHCNVQSTGLSQYREHCKEAHNVCCAFKCGDCEDEFDKYEEFIDHVRNHNYSLRFYCQYCNLKLDAANAKSHREGHVFNEQICQHCGNIFDNITSLRQHLARYKPQKKPPAEPSDTVTITRQRRVKNRKPPPALIPEWQIRSIQDKSWRGYQWTCSVCSMSFHHAEHLRAHTAGTHQACFGMKCIDCAEQPDCYRGFVYHVRRHRPYLKGYCHYCNYKFDKPEDEADHLARHFDDHNKATHLLPVYHNVNVLSHLLPVYHNVTDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVTDLSHLLPVYHNVTDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVTDLSHLLPVYHNVTDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVTDLSHLLLVYHNVTDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVTDLSHLLLVYHNVTDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVTDLSHLLPVYHNVTDLSHLLPVYHNVDDLSHLLPVYHNVDDLSHLLPVYHNVTDLSHLLPVYHNVTDLSHLLPVYHNVTDLSHLLPVYHNVNVLSHLLPVYHNVDDLSHLLPVYHIWYRSITPVTDLSHLLPVYHIWYRSITPVTDLSHLDCYSCGVIFPSREQLQSHMDTFNPPKPKWLPYLRPEKPHTVEDLTCHVCKKVTTTPSGLRKHMNRHTERTKDYPCEICGNAFYSKSALNAHRKTHSETKSEVCEICKQSFKTLTYLKEHIKTHSDERPFQCEVCSKAFKRKRQLEEHFRIHTNDMPFQCQYCLKAFRHKTNLKVHEHQHTGARPFSCTDCDRSFSNWTNCNKHMKRKHGKTLAKKALTAQGKLPLDPVTGRPTQVDDSLSVQEWKQQMLARRPGKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -