Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735282.1:1462974-1464887[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.019 1.1 10.4 2.4 1 23 58 80 58 80 0.98

2 15 0.022 1.3 10.2 0.1 2 23 109 130 108 130 0.97

3 15 0.00082 0.048 14.7 3.4 2 23 151 173 150 173 0.95

4 15 0.0099 0.58 11.3 4.1 1 23 178 201 178 201 0.95

5 15 0.022 1.3 10.2 2.3 1 23 206 229 206 229 0.95

6 15 0.001 0.059 14.4 0.9 2 22 261 281 260 281 0.96

7 15 0.014 0.8 10.8 0.4 1 23 342 365 342 365 0.92

8 15 3.5 2e+02 3.2 0.1 3 23 394 415 392 415 0.83

9 15 0.046 2.7 9.2 0.6 3 23 439 461 437 461 0.96

10 15 0.00053 0.031 15.3 0.6 3 20 468 485 466 489 0.90

11 15 0.052 3 9.0 0.3 1 23 494 517 494 517 0.97

12 15 0.00079 0.046 14.7 0.6 2 23 523 545 523 545 0.92

13 15 5.8e-05 0.0034 18.3 4.1 1 23 549 572 549 572 0.98

14 15 7.7e-05 0.0045 17.9 0.4 2 23 579 600 578 600 0.96

15 15 0.0074 0.43 11.7 1.1 1 23 606 628 606 628 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.019	1.1	10.4	2.4	1	23	58	80	58	80	0.98
2	15	0.022	1.3	10.2	0.1	2	23	109	130	108	130	0.97
3	15	0.00082	0.048	14.7	3.4	2	23	151	173	150	173	0.95
4	15	0.0099	0.58	11.3	4.1	1	23	178	201	178	201	0.95
5	15	0.022	1.3	10.2	2.3	1	23	206	229	206	229	0.95
6	15	0.001	0.059	14.4	0.9	2	22	261	281	260	281	0.96
7	15	0.014	0.8	10.8	0.4	1	23	342	365	342	365	0.92
8	15	3.5	2e+02	3.2	0.1	3	23	394	415	392	415	0.83
9	15	0.046	2.7	9.2	0.6	3	23	439	461	437	461	0.96
10	15	0.00053	0.031	15.3	0.6	3	20	468	485	466	489	0.90
11	15	0.052	3	9.0	0.3	1	23	494	517	494	517	0.97
12	15	0.00079	0.046	14.7	0.6	2	23	523	545	523	545	0.92
13	15	5.8e-05	0.0034	18.3	4.1	1	23	549	572	549	572	0.98
14	15	7.7e-05	0.0045	17.9	0.4	2	23	579	600	578	600	0.96
15	15	0.0074	0.43	11.7	1.1	1	23	606	628	606	628	0.96

Sequence Information

Coding Sequence: ATGACTTGGATGTTTTATCATGTTGGGTACATTTACAGTAGATTCATCTCTTTTGCAGATGCAAAGGCTGTAAGAACTCGGCCAACGAAGACATCGTCCGTCCGAAGGCGGAAAAACCTACAAATCGTTTTCAACAACACAAGTATCATACCTTTCAAATGGCGCGGGAAGTACCGATGCTTCTACTGTAGCAAAAACATCACAGAATACACTGAGCTCCGTAAACACACTGAGTCGCATGGCAAATGCTCGTTAGACGATCATTCGATTAAACTTATCAAAGGCGGGAATAATATGGAGGTCAAAATTGATGTTTCCGATGTCACCTGTGACATTTGTAGTGATAGTTTTGAAGATATAGAACTGTTGATCAAACATCTGTCGAAGCATAAATTAAAGTACGACAGTGGCGTCGACACCGCGTTGGAACCTTATAGGCTGGTCGATTTAACCTGTCATCTATGCAAGAAGAAGTTTACATACTTCGGTTATCTAGTCTCGCATATGAATCAAAGCCATCCGAAGAACTGTCACATTTGCGACACTTGCAGTCAAAAGTTTAACAAACGACGCGATCTGTTCTCGCATATCAAAAACTACCACCGCGAGGGGGGATATAAGTGTGATTATTGCCCGCACAAATTCGGCACTCTTAATATCTTACGGAAGCACCAAGCGAATAGGCATTTGACTAGATGCGATATCTGCTTTCTAAAACTTCCTTCAGCGGCTTTAAAGCTAAAACACTTGGAACAAGAACACCCCGAGGACGATAGCCTGCAATGCCAGAACTGTGAGAAAGTGTTTCACACAAAATTAGGCTTAAAAATGCACATCAGAACTTGCAGGCCTGAAGATGAGATGTTCGAAGAGGCTCTTAAAAAGGAGACCGAACTAAACGACTCGGATGACAACTACGATGATAGCACTGTGAAGCGACAGAGtgtaaaacaaatcaaacaaaatatagtaTCCGTCATCAATATGTCCACCGCTATACCGTTTAGCTTCTACAAAAATAAGTTTAATTGTTTCTATTGTTCGGAGGATTTCGCCGATTCAGATTCCATGAAGGAACACACGGTAGTATCACATCCGGTGTGTGATATAAAATACAAATGCATCAAAAAGTGTAGGGAGTCCAACGTTACAGTCAAGTTAGACATCTCTACACTAGCTTGCAAGGTTTGCTTCGAGACCTGGACAGATTTAGAAACTCTAGTCGATCATTTGATTGAAAAACACAACGCTGATTACGATAAAACTATTACCACCTGTCTGCAACCTTATAGGCTTGTAAAAGACCACATGGCTTGTCCACACTGCCCTGACCAAGTCTTTCGATTCTTCGGCACTCTTCTCAAACACATAAACTCGAATcacacaaataacaatataatctGCGTCTACTGCGGCCAGACTTTTCGTAAAGAGCAGAACCTGAGAGTACACATATGGCGTCATCATAAGGAAGGCCAGTTTAAATGCACGATATGTGAAGCGGAGTGCGGGATGCCATCTCGTCTGTACATGCACATGGCGACTGTACACGGCGTCAAAGCAGCCAAGTGCTCCAAATGCGGAGAAAGATTCGCCACTCAATACTTGAGACAGAAGCACCTGATTGACGTCCACAATTCAGGGCACAAATGCACATATTGTGGCAAACTCTTTGTAAGAAACTCCTTTATGAAGGATCACATAAGACGTACACATTTGAAAGAGAAAAATGTCGAATGTACGGTCTGCGGGATGAAGTTTTTCAACAATATCTTGCTGAGGCGGCATATGGTCAAGCATAGTGGCGAGAAGAATTTCCACTGCGATATTTGTGGCGAGAGATTCTTCTGGAGAAAGGGTCTAGTGAGGCACATGGGCAGGCATAATAAGCAACCGAGCAGCGTGGCAatgtaa
Protein Sequence: MTWMFYHVGYIYSRFISFADAKAVRTRPTKTSSVRRRKNLQIVFNNTSIIPFKWRGKYRCFYCSKNITEYTELRKHTESHGKCSLDDHSIKLIKGGNNMEVKIDVSDVTCDICSDSFEDIELLIKHLSKHKLKYDSGVDTALEPYRLVDLTCHLCKKKFTYFGYLVSHMNQSHPKNCHICDTCSQKFNKRRDLFSHIKNYHREGGYKCDYCPHKFGTLNILRKHQANRHLTRCDICFLKLPSAALKLKHLEQEHPEDDSLQCQNCEKVFHTKLGLKMHIRTCRPEDEMFEEALKKETELNDSDDNYDDSTVKRQSVKQIKQNIVSVINMSTAIPFSFYKNKFNCFYCSEDFADSDSMKEHTVVSHPVCDIKYKCIKKCRESNVTVKLDISTLACKVCFETWTDLETLVDHLIEKHNADYDKTITTCLQPYRLVKDHMACPHCPDQVFRFFGTLLKHINSNHTNNNIICVYCGQTFRKEQNLRVHIWRHHKEGQFKCTICEAECGMPSRLYMHMATVHGVKAAKCSKCGERFATQYLRQKHLIDVHNSGHKCTYCGKLFVRNSFMKDHIRRTHLKEKNVECTVCGMKFFNNILLRRHMVKHSGEKNFHCDICGERFFWRKGLVRHMGRHNKQPSSVAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00163544;
90% Identity: iTF_00163544;
80% Identity: -