Aalb016264.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- zfy1
- Assembly
- GCA_963457715.1
- Location
- OY735269.1:11759961-11761385[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00054 0.031 15.2 0.0 2 23 152 173 151 173 0.98 2 11 0.005 0.29 12.2 4.9 1 23 179 202 179 202 0.96 3 11 3.6e-05 0.0021 19.0 1.5 1 23 209 231 209 231 0.99 4 11 3.5e-05 0.0021 19.0 0.3 1 23 237 259 237 259 0.98 5 11 5e-05 0.0029 18.5 0.2 1 23 265 287 265 287 0.97 6 11 0.0058 0.34 12.0 1.5 1 23 293 316 293 316 0.93 7 11 4.6e-05 0.0027 18.6 0.5 2 23 323 345 323 345 0.94 8 11 0.0094 0.54 11.3 0.5 5 23 351 369 350 369 0.77 9 11 6e-05 0.0035 18.2 0.7 1 23 375 398 375 398 0.91 10 11 1.3 73 4.7 1.5 1 23 404 428 404 432 0.90 11 11 2.5e-05 0.0014 19.5 2.6 1 23 435 458 435 458 0.97
Sequence Information
- Coding Sequence
- ATGGAGCCTCAATTTTGTCGAGTATGCCTCAATAAAGCCGCTACAGTTTCtttattttctaagaaagaTGACAATATACAGTACTGCACGAAGCTCATGCGATGTGCGAACGTAGAAGTGAGTGGTGACGACGTTCTCCCGAGCCACATCTGTGATAGTTGCATCTCCGAACTTAATGTTACATACAACTTCATAGAAAAGTGTGAGGCTTCCGAAAAGGCACTGCGGTGCATCGATATTAGTAAAGAGTTCGTAGAAAACGAAGTAAAGTCTGAAATCAAGGAAGAAACTGGATGCCATGATGGTATAGATAACGACTACCTCCTTGACCCAGCCTCAAACTCAAATGATGATGtagaaattaaacaaaaatgcaataaaagaaaatatcgtaaaaaaaatacagaaaaaaagGCAAAGGAAAAAGTGAAACGCGGAAAATCTGGGCACATACAGTGCACCATATGTGGATTGATGGTGATCAGTGTCTCGGCCATGCAGGTGCACATACGCACACACACGGGGGAAAAGCCCTTTGCTTGTTCATTCTGTGATCATTGCTACATGTCTAAAGGAGCTCTGAAACGGCACACTGAAACATTTCACACAAAACGGGAAAGAAAGTTCACCTGTGAAACCTGTGGCAGCAGTTTCTACCGTAAAAACGATATTATAACACACATGCGCCGTCACACAGGGGAAAGACCATATTCATGTCCGTACTGCCCTAAATCATTCCTTCAAATAGCATCTCTTATCCGACATAAAAGAATACACACTGGTGACAAGCCATTTGCTTGTGGAATATGCGACAAGAGATTTACAGATCGAACATTAGCTAATAAACATCTACTGGTACACACAGATGAAAAAAAATTCACCTGCCAGTTATGTAACAAGGCTATGAAAAGCAAGTGTTCGCTAAGAACCCACATTGCAGCTGTGCACTCCAATGAAAAGCATAATGTCTGCAGTTTCTGTGGAATGTCTTTCTCAATGAAGGGAAACCTTAAGACTCATATCGGGAGAATGCATTCTGAAAAGTCTGGAGAGTGCAACATTTGTCTGAAAACTTTCTCAGACTTGGATGTTCATATGAGAAAGCATACTGGAGAAAAGCCATTTGTCTGTGATACTTGCAATAAAGCTTTTGGAACTAAACGCAGTCTTGCAAATCATATGGTTTTCAAGCATGAGAATACTGGCAAATACAAATGTTCTATCGGAGATTGTGCTAAAACTTTTCCTGTCGGTACAATGCTGGAGTTTCACTTGTTAAAGCATCATACAAACCACACTCCATACATCTGTCAGCATTGCTCGAGAGGGTTTTACAGAACCAGTGACTTATCACGACATTTGCGAGTCAGCCACATGGATTTCTCTTTGAAAGAACCATTAAAGTCTATATCTACATCTGCATAA
- Protein Sequence
- MEPQFCRVCLNKAATVSLFSKKDDNIQYCTKLMRCANVEVSGDDVLPSHICDSCISELNVTYNFIEKCEASEKALRCIDISKEFVENEVKSEIKEETGCHDGIDNDYLLDPASNSNDDVEIKQKCNKRKYRKKNTEKKAKEKVKRGKSGHIQCTICGLMVISVSAMQVHIRTHTGEKPFACSFCDHCYMSKGALKRHTETFHTKRERKFTCETCGSSFYRKNDIITHMRRHTGERPYSCPYCPKSFLQIASLIRHKRIHTGDKPFACGICDKRFTDRTLANKHLLVHTDEKKFTCQLCNKAMKSKCSLRTHIAAVHSNEKHNVCSFCGMSFSMKGNLKTHIGRMHSEKSGECNICLKTFSDLDVHMRKHTGEKPFVCDTCNKAFGTKRSLANHMVFKHENTGKYKCSIGDCAKTFPVGTMLEFHLLKHHTNHTPYICQHCSRGFYRTSDLSRHLRVSHMDFSLKEPLKSISTSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00163545;
- 90% Identity
- iTF_00163545;
- 80% Identity
- -