Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735268.1:7267493-7283396[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.23 13 7.0 0.7 6 20 12 26 6 28 0.85

2 12 0.033 1.9 9.6 0.1 1 21 32 52 32 53 0.96

3 12 0.47 27 6.0 0.1 1 12 205 216 205 225 0.84

4 12 0.0013 0.078 14.0 4.2 1 23 415 437 415 437 0.97

5 12 3e-05 0.0017 19.2 1.3 1 23 459 481 459 481 0.99

6 12 4.5e-06 0.00026 21.8 0.7 1 23 535 557 535 557 0.97

7 12 0.0015 0.089 13.8 2.2 1 23 573 595 573 595 0.98

8 12 1.5e-06 8.5e-05 23.3 4.7 1 23 601 623 601 623 0.98

9 12 0.0033 0.19 12.8 4.2 1 23 629 651 629 651 0.97

10 12 2.7e-06 0.00016 22.5 0.4 1 23 657 679 657 679 0.98

11 12 0.00063 0.037 15.0 0.7 1 23 683 705 683 705 0.97

12 12 7.8e-05 0.0045 17.9 0.3 1 23 713 736 713 736 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.23	13	7.0	0.7	6	20	12	26	6	28	0.85
2	12	0.033	1.9	9.6	0.1	1	21	32	52	32	53	0.96
3	12	0.47	27	6.0	0.1	1	12	205	216	205	225	0.84
4	12	0.0013	0.078	14.0	4.2	1	23	415	437	415	437	0.97
5	12	3e-05	0.0017	19.2	1.3	1	23	459	481	459	481	0.99
6	12	4.5e-06	0.00026	21.8	0.7	1	23	535	557	535	557	0.97
7	12	0.0015	0.089	13.8	2.2	1	23	573	595	573	595	0.98
8	12	1.5e-06	8.5e-05	23.3	4.7	1	23	601	623	601	623	0.98
9	12	0.0033	0.19	12.8	4.2	1	23	629	651	629	651	0.97
10	12	2.7e-06	0.00016	22.5	0.4	1	23	657	679	657	679	0.98
11	12	0.00063	0.037	15.0	0.7	1	23	683	705	683	705	0.97
12	12	7.8e-05	0.0045	17.9	0.3	1	23	713	736	713	736	0.96

Sequence Information

Coding Sequence: ATGGACAGAATAATACTTCATTGTCCTCTGTGCTGCGACGAAACTTTCAGCTCAAAGCAGGCACTTGCCGATCACTTGTCAAATTACTCAAAGTTTACTTGTCCACTTTGTAACAACAACTTTGAGTCTATTTCGTTCTTAGCGGATCATCTGAGGGCCACAGATTGCTGTCTTCCAAACACTCCGAGTCTGCTAGCCGGACCTGATATCAGGACAAAGTCTGTTTTGGTGAATCTTAAGCTTGAGGGTTCCATAGAAAACCCAAACTATGATAGTGCTAACAGCAGAGAGTACCAAAACCATTCCCCAAATGATGAACTCCCAGAAGAGGGCATGGAAGTGGAGACAGACAACATGTACGAAGATCTTCTGGGAGAGTCGCTCTCGAAAGACATGTCACTTCTGGAGGAGAATGGACACAGCAAGTACACAATTGTTGCCCACAACGGAGTGCCGGCCATCATGTCCAGTGGATCTGTGATCACTAAGCAAAATAGTGATGGAACTATCTCTATTACTGCAATAGAAAAAGAATCAGAATCAAACATGAAACTAGAATCAGACCCTATAATAACAGTGGCTGAGAAGGACTCGTCCAGCCAAGATGAATTATACAGCTGCAACACATGTGGAGTAGCATTCTCATCTGTACTGCAACATATACAGGAAAGGCACAAGGATCAGGATGTGGTTGTTGAGGTAAACGATTCAGGTACCAACCTCGCAGAGGAAAGCAATAATGAGGACATGCCAATAACATTCATGACCTTAGAAGATATGGAAAGCAATACCAAGGATCCGATGAGCTACGTCTCAGTGAAGCAAGATGAGTCAGAGCCATCAGAAACCCACTCAACGGCCAGGAGAGTAATTACTGACACTGGTGATATTGTGGAGACAACTTCTCAAGACTCTATCTCAAATCAGGATATTCAAAATGGTAACACGAGCACATCACAAAGTAGTATTCCTCTCTCGCTCTCACTCGAAGAGGAGGTAGTCGACAAAAAGGGACGCCTGTTCACACGACGTTACGTGCAAATTGACAAGATCAACTCTAAAGATGATAATGGGGCTGAAGCTGTGAAGAACGCGCAAAAATCGCCGTTCCACCAGGTGGTGATAAAGGAGATCGTCACGATGGACGGCGGCAACAAGATGAAGGTGTATAACTGCATCGCGTGCCACATATATGTCACAGCGCTGGAGGAGTTTAGGTCGCATCCGTGCAAATCATTGAAGTACTGCTGCCTGCACTGTCCGGTGTCGTACGAGAACGCCAAGTCTCTGTGCGCGCACATGAAAGTGCACAAGATCGGCAAACAGTCCAATCCGGACGTCAAGCGAGCGGAGGTGGAGATAATACACGGACCATTCAAATGTGATGTTTGCAGTACAATCTTCCCCACTAACAAGTCACTGAAGTTGCATAGAAGAATGCATAATgctgtaaaGCCCCGCGAAATTGAGCCGCCAGTAGACGACGACGGCCGAACAGCGGCGCCCGCGCACGGCGACAAATACTTCTGCGCTTTCTGCGACAAATGGATCCCCAAAGGGTACAAGAATGTCCACGACGACTTCCACAACAATATAGACAACTTCAACTGCGATATCTGCAATAAGAAGTTCACGAGCAACGCCTACCTCATAATGCACATGACTGTGCATAATACGGAGAAGGCGGAAGTGAAGAAGTCGGATAAGTCGTTGCCGTACACCTGCCTCTACTGCAACCGACAGTTCGCGCGACCACACGAGAAAGTCAAACACGAGCGAATACATACAGGCGAGAAGCCTCACACCTGTGAGATCTGCGGCAAATCGTTCCGCGTGTCGTACTGTCTGACGCTACACATGCGCACGCACACAGGCGCGCGCCCGTACGCGTGCCAACAGTGCGGGAAGAGGTTCAAAGCGCACAGCGTGTACAACCATCACCTGCTGACTCACTCGGACGTGAGAGCCTACAAGTGTCCGTACTGCCCGAAGGCGTTCAAGACCTCGGTGCAACTGGCCGGGCATAAGAACTCGCATACCAAGCCGTTTGCCTGCACACACTGTAACAGACCGTTCGCGTCCCTCTACGCGGTGCGCGTCCACACAGAGACGCACCGGCGACAGAACAACCTCAAGTTTTCATGCTCGCTGTGCGGCGCGAGCTACGCGCGCTCCTTCGCACTGAAGGACCACATGAAGCAAGTGCACCAGACGGATGTGGACACTGCTGATAGTGTGACCATGGTAGCTTTTAATGGAATTCCTGGTTTGACTGAAGACAAGGACTGGAACGCAGACCATAGCAACGCCGACGGCGATATATCCAAGACGCATCTTCACGAAGAGttggAGATGGAGGAAAATTCGCAAGAATCCGAAACTGTGATAACTTAA
Protein Sequence: MDRIILHCPLCCDETFSSKQALADHLSNYSKFTCPLCNNNFESISFLADHLRATDCCLPNTPSLLAGPDIRTKSVLVNLKLEGSIENPNYDSANSREYQNHSPNDELPEEGMEVETDNMYEDLLGESLSKDMSLLEENGHSKYTIVAHNGVPAIMSSGSVITKQNSDGTISITAIEKESESNMKLESDPIITVAEKDSSSQDELYSCNTCGVAFSSVLQHIQERHKDQDVVVEVNDSGTNLAEESNNEDMPITFMTLEDMESNTKDPMSYVSVKQDESEPSETHSTARRVITDTGDIVETTSQDSISNQDIQNGNTSTSQSSIPLSLSLEEEVVDKKGRLFTRRYVQIDKINSKDDNGAEAVKNAQKSPFHQVVIKEIVTMDGGNKMKVYNCIACHIYVTALEEFRSHPCKSLKYCCLHCPVSYENAKSLCAHMKVHKIGKQSNPDVKRAEVEIIHGPFKCDVCSTIFPTNKSLKLHRRMHNAVKPREIEPPVDDDGRTAAPAHGDKYFCAFCDKWIPKGYKNVHDDFHNNIDNFNCDICNKKFTSNAYLIMHMTVHNTEKAEVKKSDKSLPYTCLYCNRQFARPHEKVKHERIHTGEKPHTCEICGKSFRVSYCLTLHMRTHTGARPYACQQCGKRFKAHSVYNHHLLTHSDVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFACTHCNRPFASLYAVRVHTETHRRQNNLKFSCSLCGASYARSFALKDHMKQVHQTDVDTADSVTMVAFNGIPGLTEDKDWNADHSNADGDISKTHLHEELEMEENSQESETVIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -