Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735278.1:3110610-3113350[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.082 4.7 8.4 0.0 5 23 353 371 352 371 0.96

2 12 0.34 20 6.4 0.1 3 19 379 395 377 399 0.76

3 12 0.017 0.96 10.6 0.3 2 23 407 428 406 428 0.95

4 12 8.2e-06 0.00047 21.0 2.2 3 23 435 455 434 455 0.97

5 12 6.8e-05 0.004 18.1 1.1 1 23 461 483 461 483 0.98

6 12 0.056 3.3 8.9 0.1 3 20 489 506 487 508 0.89

7 12 0.0018 0.1 13.6 0.1 1 23 541 564 541 564 0.93

8 12 0.001 0.058 14.4 0.1 3 23 573 593 572 593 0.99

9 12 0.00026 0.015 16.2 0.3 1 23 604 626 604 626 0.98

10 12 0.00014 0.008 17.1 5.6 1 23 632 654 632 654 0.98

11 12 0.0037 0.21 12.6 0.3 3 23 662 682 660 682 0.98

12 12 0.00085 0.049 14.6 0.9 1 23 688 711 688 711 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.082	4.7	8.4	0.0	5	23	353	371	352	371	0.96
2	12	0.34	20	6.4	0.1	3	19	379	395	377	399	0.76
3	12	0.017	0.96	10.6	0.3	2	23	407	428	406	428	0.95
4	12	8.2e-06	0.00047	21.0	2.2	3	23	435	455	434	455	0.97
5	12	6.8e-05	0.004	18.1	1.1	1	23	461	483	461	483	0.98
6	12	0.056	3.3	8.9	0.1	3	20	489	506	487	508	0.89
7	12	0.0018	0.1	13.6	0.1	1	23	541	564	541	564	0.93
8	12	0.001	0.058	14.4	0.1	3	23	573	593	572	593	0.99
9	12	0.00026	0.015	16.2	0.3	1	23	604	626	604	626	0.98
10	12	0.00014	0.008	17.1	5.6	1	23	632	654	632	654	0.98
11	12	0.0037	0.21	12.6	0.3	3	23	662	682	660	682	0.98
12	12	0.00085	0.049	14.6	0.9	1	23	688	711	688	711	0.96

Sequence Information

Coding Sequence: ATGGATATCGCTGGTTTATGTCGATGTTGTCTCGCGTCAGATTCTAATATCTCGTTATTGGACGGAAAAGAAGAGTTGAATCGTATATTCTACGATATAACTACAATTGAGGTGAAACCTGATGATGGTCTACCCCACAACCTGTGTGAAAGCTGCTTCAACTTAATGAGTTCTGCATACAACTTCCGAACCAACTGTCTCAACATGGACAATGAGTTGAGACTCCAATTAGACCAGCTCTTGCAGCAACGTCTGGTTGAACTGTCAGGAGCTGCCAACTCAAATGAAGATGACACTGACAACATAGCCAATGACCCCATAAAACAGCTACAGGCTATCATCAAGTCTGAACCAAATGATAGTGATGATGAATGCTATTATGTGCTAGTTGTAGACCCTAAAGATTCAGAAGCAAACAACTCTGAACCAGAAGAAGAAACAGAAACTGTTGAAAATACTCCCAATATAAAAACTGAACTAGAGGATTCTGTAAGGATAGAAAAAGAGCCTGAACCACAGCCAGAACTCTTTGAAAATTCAATAGAATCCTTCATAATCTCTGACAAAGTACCTCCCAATGTTCCCGCCACAATATTGGAGAATGAAGAGGAAAGCCAGGACAGCCAGAATACTGAAGGTCATTTTGATGGTGTCATGAATATTGTTGCAACTCAGGAGACCAATACACAAGATGACCAACACCTCATGGAGGAGACATCACAAGATGCTGATGATAATGTCAAAATGATCACCAGTGACATAGTCACGTTACCCAGACACAACAACTACGTCAAAATATTGACTACAAGAGGACCAGATGGCACCATAGTACTTAAGAGCAGTGACAACAAAATCACTTACTTGACCAACTCTGACTTGATtggtaatgatgatgatgatgatgacgaaatGTCCCAAGAAGTTATTCTGTGCGAGGCTGATGACTCGTCACAGTTTCAAATTCTGAAATGTGATGATAATGAGCTGGTGATAGAATATGCTGATGATGGTGAAATTGCAACTGTTCTTCAGCAGGAAGACGGAACATTTCTGTGTGAATGCGGCGAGGCGTTTGAAGACATCGCAGAATATGAGAAACATCAGTCAGTCCACAACCCTGGTGGAGAGCACTTGTGCAATCTGTGCGGTAAAGGATTTGAAACTGCAGCCATTTTAGCAGGCCACACCGTTCTACACAATGTGATGGGGCCCATGGTAACATGCCCTATATGCAACCAGTCCATCAAACGGAACAACCTCACACAGCACATCAAGTATGGCCACAATAACCACCGGCCACACTGCAAAATTTGTCTCAAAACCTTTGCAAATCCCAACAATCTGAAGCGACACATGTCTATTCACAGTGGAATTAGAGACTTTGAGTGTGACATTTGTTCCAAACGGTTTGCACAGAAGATCACCATGCAGACACACCGACTGACTCACGTCAACCCACTAGCATGCCCTCACTGTGACCAGGTCTTTGAGACCACCATCGTGCTGAACGTACACAAGGATTCCGATGACTGCAACAAGTCTAAAATCATCCGAGTGAAGGAGGAACTCCTGAAAACGATGAAGCAAGAAGTCACAACAACCACTGGAAAGGTTGTTGGATATGCGTGCTTGCTGTGCCAAAAGATGTTTTCTGTCGAATCTGCTTTGGAACAACATGTTGAGAATATGCATATGGTAAATCCGATGGAATTGCTCTGCTCTGAATGTGGTGAAGTGCTTCCGTCCAAAAAAGAAATGCAAGCGCACTTGCAAACCCACAAGATCTTAAAATCAAAGAACACAAAGCGATATGAGTGTGGTTCATGTGGCAAAGGCTGTACTAGCCAAGCGATGCTCATTATGCATGAAAGAGTCCACACAAATGAACGACCATACTCATGCCAACTGTGCACACTTAGATTCAAGACTAAAACTCATCTTAGGACACATCAACTGACCCACACAAGGGAAAAGAAGTTTGGCTGTTCGGTTTGCATGAAATTCTTTGCGCTGAAAGGCAATCTTGTTGTGCATCTTAGAACGCACACAGGTGAACGGCCGTATGTTTGTACGCTATGTGGCGACGCGTTTATTGATTCTAAATACTTGAAAAAGCACAAATTAAAGAAACATGCGATTGAGAAAGTAACTTGGAATCAATATATACCATAA
Protein Sequence: MDIAGLCRCCLASDSNISLLDGKEELNRIFYDITTIEVKPDDGLPHNLCESCFNLMSSAYNFRTNCLNMDNELRLQLDQLLQQRLVELSGAANSNEDDTDNIANDPIKQLQAIIKSEPNDSDDECYYVLVVDPKDSEANNSEPEEETETVENTPNIKTELEDSVRIEKEPEPQPELFENSIESFIISDKVPPNVPATILENEEESQDSQNTEGHFDGVMNIVATQETNTQDDQHLMEETSQDADDNVKMITSDIVTLPRHNNYVKILTTRGPDGTIVLKSSDNKITYLTNSDLIGNDDDDDDEMSQEVILCEADDSSQFQILKCDDNELVIEYADDGEIATVLQQEDGTFLCECGEAFEDIAEYEKHQSVHNPGGEHLCNLCGKGFETAAILAGHTVLHNVMGPMVTCPICNQSIKRNNLTQHIKYGHNNHRPHCKICLKTFANPNNLKRHMSIHSGIRDFECDICSKRFAQKITMQTHRLTHVNPLACPHCDQVFETTIVLNVHKDSDDCNKSKIIRVKEELLKTMKQEVTTTTGKVVGYACLLCQKMFSVESALEQHVENMHMVNPMELLCSECGEVLPSKKEMQAHLQTHKILKSKNTKRYECGSCGKGCTSQAMLIMHERVHTNERPYSCQLCTLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCTLCGDAFIDSKYLKKHKLKKHAIEKVTWNQYIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00163534;
90% Identity: iTF_00163534;
80% Identity: -