Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735265.1:9918979-9922397[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.8e-06 0.00022 22.0 1.7 1 23 202 224 202 224 0.98

2 9 3.6e-08 2.1e-06 28.4 1.6 3 23 232 252 230 252 0.98

3 9 0.00012 0.0071 17.3 0.3 1 23 258 280 258 280 0.98

4 9 1.9e-05 0.0011 19.8 1.6 1 23 286 308 286 308 0.99

5 9 2.7e-05 0.0016 19.3 1.7 2 23 411 432 410 432 0.96

6 9 3.5e-09 2e-07 31.6 1.6 1 23 438 460 438 460 0.98

7 9 0.0037 0.22 12.6 0.8 3 23 468 488 466 488 0.97

8 9 0.00017 0.01 16.8 0.8 1 23 494 516 494 516 0.99

9 9 0.024 1.4 10.1 0.8 1 23 522 546 522 546 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.8e-06	0.00022	22.0	1.7	1	23	202	224	202	224	0.98
2	9	3.6e-08	2.1e-06	28.4	1.6	3	23	232	252	230	252	0.98
3	9	0.00012	0.0071	17.3	0.3	1	23	258	280	258	280	0.98
4	9	1.9e-05	0.0011	19.8	1.6	1	23	286	308	286	308	0.99
5	9	2.7e-05	0.0016	19.3	1.7	2	23	411	432	410	432	0.96
6	9	3.5e-09	2e-07	31.6	1.6	1	23	438	460	438	460	0.98
7	9	0.0037	0.22	12.6	0.8	3	23	468	488	466	488	0.97
8	9	0.00017	0.01	16.8	0.8	1	23	494	516	494	516	0.99
9	9	0.024	1.4	10.1	0.8	1	23	522	546	522	546	0.95

Sequence Information

Coding Sequence: ATGTACACGACAGCCCCATACGTGCTATACAAAGATGGCGTCGAGCGCGCGCCGCCCGGCACGCAGTGGGGCGGGGGGGTGCTCGACGCGGGGGGCTACCAGCACCAGCCCGCCGCCATGCAGCACCAGCCGCAGCCGCAGCACGCCGGCTCTCCGCAGCCGGAGCCGCAGCTCGCCTCCCCCGCACCCTCGCCGTACCCCCCCGCACCGCCCGACCCGGCTACAACAGAGGAACAGCAGCTACAGCAACAAGTCCAGCAACAAGTCCAGCAACAGACGTCCCCGGATCACATGCAGGTTGAACAGCAGTTGCAAGCGCAGCAACAGACGCAGGAGCATATCGATAGAGCGCCGTGTTTTATCCCGCAGCCAGATTTAAACCAGCagtatgccaccccgtatttcAAAGAGACGAGACCGGCAGGACACATGATAAGTTCTGGAGGATTCCCGTTGCACTACTTgaaacaaaatggcggagttcTCTCCCTGGAGGGGCCTTTAGACCAATACGCTTCGCCGGAACTGAGGCACCTGCCCGACATAGTGCAGCCCGAGCAGCCCAAGCCGAGGAAGCACAACCCCAACTCCGAACTGAGGCTGTTCAAGTGCCTGACGTGCGGGAAGGACTTCAAGCAGAAGTCGACGCTGCTGCAACACGAGCGCATCCACACGGACTCGCGGCCGTACGGCTGCCCCGAGTGCGGCAAGCGGTTCCGCCAGCAGTCGCATCTCACGCAGCACCTCCGCATCCACGCCAACGAGAAGCCCTACGCCTGCGTCTACTGCCCGCGCTCCTTCCGCCAGCGCGCCATCCTCAACCAGCACCTCCGCATCCATTCCGGTGAGAAGCCATATTCGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAATCAGCACGTCCGCACACACCAAGACGTGTCGCCGCACCTCATCTTCAAGAACGGGCCGACGCCGACGCTGTGGCCGCAAGACGTGCCCTTCCCCGACGAAAACAAGGAGGAGATCCAGTCACAGTTCGGCGACGCAGAAGCAGGCGGCGGCGACCCGCGCGGCTCCTGCTTCTCGCCCGGCGACTCCACACAGTACCCCGCCTACTTCAAGGACACTAAGGGGCTCAGCCACGGCGTGTTCGGCTCGGGGCTCTCGCTGCAGTACCTAAAGGGCGGCAAGCTGCCCGACGTGCTGGGCGGCGGCCGCGCCATGCCGCTCTACGTGCGCTGTCCGATCTGCCAGAAGGAGTTCAAGCAGAAATCGACGCTGCTGCAGCACGGCTGCATCCACATCGAGTCGCGGCCCTACCCTTGCCCCGAGTGCGGCAAGCGCTTCCGCCAACAGTCGCACCTCACGCAGCACCTCCGCATCCACACCAACGAGAAACCCTACGGCTGCATGTACTGCCCGCGTTTCTTCCGACAACGCACCATCCTGAACCAGCATCTCCGCATCCACACCGGAGAAAAGCCCTACAAGTGCGCGCAGTGCGGCAAGGACTTCCGGCAGAAGGCGATCCTAGACCAGCACACGAGGACGCACCAGGGCGACCGGCCCTTCTGCTGCCCCATGCCGAACTGCCGGCGGCGGTTCGCCACCGAGCCCGAGGTCAAGAAGCATATCGATAACCACATGAACCCACATGCGGCGAAGGCGAGGCGAGCTGACGCCAGCAAATTGCCGCGCCCGCTGCCTCCGGCCTCCGCCGTGGTCAAGCCCGAGCTCTACTTCCCACAGTGCTACGCCCCGCCGTTCCAGCAGTTCCCATCGGCTGGAGAATTCAAGCCCGCCGTGGCGCCGGGCACGGTGCCGTGCCTGCCCGCGCAGTGA
Protein Sequence: MYTTAPYVLYKDGVERAPPGTQWGGGVLDAGGYQHQPAAMQHQPQPQHAGSPQPEPQLASPAPSPYPPAPPDPATTEEQQLQQQVQQQVQQQTSPDHMQVEQQLQAQQQTQEHIDRAPCFIPQPDLNQQYATPYFKETRPAGHMISSGGFPLHYLKQNGGVLSLEGPLDQYASPELRHLPDIVQPEQPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYSCGECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPTPTLWPQDVPFPDENKEEIQSQFGDAEAGGGDPRGSCFSPGDSTQYPAYFKDTKGLSHGVFGSGLSLQYLKGGKLPDVLGGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCMYCPRFFRQRTILNQHLRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADASKLPRPLPPASAVVKPELYFPQCYAPPFQQFPSAGEFKPAVAPGTVPCLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358842;
90% Identity: -
80% Identity: -