Basic Information

Insect: Argyresthia albistria
Gene Symbol: ham
Assembly: GCA_963457715.1
Location: OY735268.1:7057224-7065225[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.04 2.3 9.4 0.0 2 23 39 61 39 61 0.94

2 9 0.004 0.23 12.5 2.2 1 23 68 91 68 91 0.93

3 9 2.2e-08 1.3e-06 29.0 0.5 1 23 97 120 97 121 0.96

4 9 1.7e-06 9.9e-05 23.1 1.7 1 23 126 148 126 148 0.95

5 9 6.1e-05 0.0035 18.2 6.1 1 23 154 176 154 176 0.99

6 9 0.00027 0.016 16.2 0.4 2 21 184 203 183 204 0.94

7 9 1.5e-08 8.4e-07 29.6 0.7 1 23 605 627 605 627 0.98

8 9 5.2e-07 3e-05 24.7 1.7 1 23 633 656 633 656 0.97

9 9 5.7e-06 0.00033 21.5 3.3 1 23 662 684 662 684 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.04	2.3	9.4	0.0	2	23	39	61	39	61	0.94
2	9	0.004	0.23	12.5	2.2	1	23	68	91	68	91	0.93
3	9	2.2e-08	1.3e-06	29.0	0.5	1	23	97	120	97	121	0.96
4	9	1.7e-06	9.9e-05	23.1	1.7	1	23	126	148	126	148	0.95
5	9	6.1e-05	0.0035	18.2	6.1	1	23	154	176	154	176	0.99
6	9	0.00027	0.016	16.2	0.4	2	21	184	203	183	204	0.94
7	9	1.5e-08	8.4e-07	29.6	0.7	1	23	605	627	605	627	0.98
8	9	5.2e-07	3e-05	24.7	1.7	1	23	633	656	633	656	0.97
9	9	5.7e-06	0.00033	21.5	3.3	1	23	662	684	662	684	0.98

Sequence Information

Coding Sequence: ATGTCCTTGATTCCAGGTCGTCAGATAGCCAGCGTCAACTCGACGAGCAGCGTCGATTCCCAGCAGCGTTCCCTTTCTCTCGCTGAGGAGGAAGAGAGAGAGGAGACAGAACCGAGGTGCTCGTTCTGTGACGCCCCGTTCCCGAATATTGACGCGCTCGACCGCCACCTGATCCAAGCCCACGACCAGCCAGCAGCCGAGTTCCACTGCGAGTTGTGCAACCGCGCGTACTGCTCCCGCGCATTGCTGCTGCGCCACCGTGCGCTTGCGCACACCGACATCAGGAAATATCCCTGCGAGAACTGCCCTAAGGTATTTACCGATCCTTCCAACCTGCAGCGCCACATCCGAGCGCAGCACCACGGCGCGCGCAGCCACGCCTGCCCCGAGTGCGGGAAGACCTTCGCGACCTCGTCGGGCCTGAAGCAGCACACGCATATTCACTCCAGCGTCAAGCCGTTTCAGTGCAAGGTGTGCTTTAAGGCTTACACCCAGTTTTCAAACTTGTGCCGGCACAAACGGATGCACGTCGCCTGCCGAGCCCTGGTGGAGTGCGGGAAATGTGGCCAGTCGTTTAACTCCTACGCTTCTCTCACCAAACACAAGAGGTTCTGCGAAACGGCTGCAGTCGCCAACGTCAATATGAGAGGCCAGATGCAACCTGGAATGCCACAGCTTCCCCAGTTAGGAAACGTCGGGATGAACAGCCAGAATAGTCCAAACCCGTTCCCGATATACAGGCCTACGCTGCCTTTGTCTTACAATACTTTTGCTCACTACCCTGCGCTGTTCTCAGCAGCTGCGGCGGCTGCGTGTCCGCCTGAATTCCTGAACCCACTTCTGTTCAACGTGCAAGGAGCACGTCTGGCAATGGAGCATGACATTGCAATGTCACAAGCGAGTTTATTATCCAAGCAAAAGGAAGCGGAAAGGCAAGTGAAAAGAGAAATGGATAACTCAAGTTGTATGGACGATATGACTAGAATTAAAGATGATTATGAAAATAAACGTGACACAGACAGCTCGGATAGAATCACCCCAAAATCGCTAACCATGACTTCTAAGAATTCACCGCCATCGGCTGAAGAGGCAACATCTCAACAACGTCCTTCACCAGTGATTCCCATGCCAAAGCCAATCATACCGTATAACTACACAAGAGATGAATTAAAGCGAAAGTCACCATTCAGCTTCTCGATAAACAACAATATTGACCACAAATCTTCTGACTCACCATCTCTACCAAAACGACTAAGGGAATCACCAAAAAATTTAAGCAATGACGATGAAATAGCTTCAGAGTATTCGGAAATTGAGGAAGACACAAAGAAGGATGAAGGAGATCAGCCGCTGGATCTTTCAGTATCACGTAAACAAAGCGACAAGGAATCCGAAGCTGACAACGATGATCGTTCCTTTCGTAACTCCTCAGTCAAGTCCTACTCCCCACCTGAGAGTCCAGCCGAGAGAGATAGCAAGACTCCCGAAAACGATACCATGGATGAAGTCGATGTAGAAGGAGTAGAGCCTAAGCGAGACGAGTCACCGCAACAGCTGATATCGCCTCCGCTAGCGTTCCCGATGCCAGTCCACCCGCAGCACGCCAACAGTCTCATGGACATGTACCGGCCTAGGTTTCCGTCTTTCCACGCGGCGTCTGATGCTCTCCTCAACCCCTCCCACAATCCCTACGGCCCGAGCCCGTTCAATTTTTTATCCCCACTTCTCGGGGCTGAAGGGCCGGACCGGCAGCCCAGCGCCTACGCTAAGTTCCGCGAGCTCAGCGCGGGAACGGGTAAGATGAGGGACAGGTATGCCTGTAAGTTTTGCGGGAAGGTCTTCCCGAGGAGTGCGAATCTGACGCGCCATCTGAGAACGCACACAGGCGAGCAGCCTTATAAGTGCAAGTACTGCGAGCGGTCGTTCTCGATCTCCTCCAACCTCCAGCGTCACGTAAGGAACATCCACAACAAGGAGCGTCCTTTTCGGTGTCCTCTCTGCGACCGCTGCTTCGGTCAGCAGACCAATCTCGACCGACATTTGAAGAAGCATGAAGCAGAAGGCGGGGACTCTCCGAGTTCGGCGGATACGGAACGCGAGGACGCATACTTCGACGACATCAGGTCCTTCATGGGGAAGGTGACGTGTTCCCCGGGCGCTGGGGTGGCGGGCTCCCCTCCCGCGACCTCCCCGCACGCGCCCACGCACGCGCCCGGCCGCGGCTCCGCTCTCGCATGCTCGACATAG
Protein Sequence: MSLIPGRQIASVNSTSSVDSQQRSLSLAEEEEREETEPRCSFCDAPFPNIDALDRHLIQAHDQPAAEFHCELCNRAYCSRALLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHHGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHVACRALVECGKCGQSFNSYASLTKHKRFCETAAVANVNMRGQMQPGMPQLPQLGNVGMNSQNSPNPFPIYRPTLPLSYNTFAHYPALFSAAAAAACPPEFLNPLLFNVQGARLAMEHDIAMSQASLLSKQKEAERQVKREMDNSSCMDDMTRIKDDYENKRDTDSSDRITPKSLTMTSKNSPPSAEEATSQQRPSPVIPMPKPIIPYNYTRDELKRKSPFSFSINNNIDHKSSDSPSLPKRLRESPKNLSNDDEIASEYSEIEEDTKKDEGDQPLDLSVSRKQSDKESEADNDDRSFRNSSVKSYSPPESPAERDSKTPENDTMDEVDVEGVEPKRDESPQQLISPPLAFPMPVHPQHANSLMDMYRPRFPSFHAASDALLNPSHNPYGPSPFNFLSPLLGAEGPDRQPSAYAKFRELSAGTGKMRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCDRCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGAGVAGSPPATSPHAPTHAPGRGSALACST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00163515;
90% Identity: iTF_00163515;
80% Identity: -