Basic Information

Insect: Argyresthia albistria
Gene Symbol: -
Assembly: GCA_963457715.1
Location: OY735280.1:4278540-4285640[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00031 0.018 16.0 7.7 1 23 244 266 244 266 0.98

2 15 0.00033 0.019 15.9 1.3 1 23 270 292 270 292 0.97

3 15 0.19 11 7.2 1.8 1 23 302 325 302 325 0.96

4 15 3.9e-05 0.0023 18.8 4.4 1 23 331 353 331 353 0.98

5 15 0.083 4.8 8.4 2.6 1 23 358 380 358 380 0.96

6 15 4.9e-06 0.00028 21.7 1.2 1 23 386 408 386 408 0.98

7 15 0.0024 0.14 13.2 5.3 1 23 414 436 414 436 0.98

8 15 0.0045 0.26 12.3 3.7 2 23 441 462 440 462 0.97

9 15 0.0017 0.098 13.7 2.0 1 23 471 493 471 493 0.98

10 15 0.00012 0.0069 17.3 0.4 1 23 499 521 499 521 0.96

11 15 1.1e-05 0.00065 20.5 3.7 1 23 527 549 527 549 0.98

12 15 2e-06 0.00011 22.9 2.6 1 23 555 577 555 577 0.99

13 15 1e-05 0.0006 20.6 1.8 1 23 583 605 583 605 0.98

14 15 0.0077 0.45 11.6 1.1 2 23 612 633 611 633 0.97

15 15 7.4e-05 0.0043 18.0 3.9 1 23 639 661 639 661 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00031	0.018	16.0	7.7	1	23	244	266	244	266	0.98
2	15	0.00033	0.019	15.9	1.3	1	23	270	292	270	292	0.97
3	15	0.19	11	7.2	1.8	1	23	302	325	302	325	0.96
4	15	3.9e-05	0.0023	18.8	4.4	1	23	331	353	331	353	0.98
5	15	0.083	4.8	8.4	2.6	1	23	358	380	358	380	0.96
6	15	4.9e-06	0.00028	21.7	1.2	1	23	386	408	386	408	0.98
7	15	0.0024	0.14	13.2	5.3	1	23	414	436	414	436	0.98
8	15	0.0045	0.26	12.3	3.7	2	23	441	462	440	462	0.97
9	15	0.0017	0.098	13.7	2.0	1	23	471	493	471	493	0.98
10	15	0.00012	0.0069	17.3	0.4	1	23	499	521	499	521	0.96
11	15	1.1e-05	0.00065	20.5	3.7	1	23	527	549	527	549	0.98
12	15	2e-06	0.00011	22.9	2.6	1	23	555	577	555	577	0.99
13	15	1e-05	0.0006	20.6	1.8	1	23	583	605	583	605	0.98
14	15	0.0077	0.45	11.6	1.1	2	23	612	633	611	633	0.97
15	15	7.4e-05	0.0043	18.0	3.9	1	23	639	661	639	661	0.97

Sequence Information

Coding Sequence: ATGATGATGGAGATGGAGTCTGAAGTCCTGGAGATCAGTGTTGCCAGTAGTACTCAAAGCTGCTTCACCTGTTTGGTAGCTGGCCGTGAGCTTAGCACTCTCACAGAAGACTCGAGGCCTTATTACTTGGACATTATCCGCGAGATACAGCAAAAGTCACACTCTATAGTTCCTGTCATCTGTTGGGAGTGTGAAGCGGTGCTGAGAAGATGGATCAGGTTCCGGGAGCAAGTGAAACACTCGTACATGACGTTGCAGGCTTCTGTACTCAATAATAGCAGGGGCGTGTTCGACAACGTCACGCCATGCTCACCACGACTGCGTTTAACGCACATCACGCACACAGATATACAACCGCGTTCACACTGTCAAACGCGCGCAGAGGTGACGACGGATCCTCTGACGAAGGAAGTTACGGCTGAAGCGTTTCATGTAGAGATTGCGGATTGTTTCAAAGAAGAGAGCGGGGATGGAGAAGATCTGGACTCGACCTGCAACAATGCTGCACCAGATGACTTGAAACTGACTTTCAATTTAAAGACGGAATGTTCAGACTCGGGCCCAGTAGCGTCTCATAGTTGGCAAGTCATGGCGAAGATTGAAGAGGAAAATACCAAAAGTAGTGCTCAAGAACACGGCTGTACCGATTCCGAAACGTTATTTTTTGGTTTGGAGCAAAGAATCATCCAAGACAGCGAAAGTTTCCAAAAAGCTTTGGATATGGAACAACATGAGTGTAAACATTGTCATAAAGATTTTCCTACATCAGCACAATACAAGAGTCATCTAAAGACACATACTAAACCTTACCGTTGTGGATTATGCACGAAAAGATTCGCAAGAAGAATTGCCATGAAAACTCATATGACACAACATAAATCAAAACATAGAAATTCAAGCGCTTATCAGTGTGATGAATGTGGCTTGAAAGTTTCCTGCAGAAACCGATTCATTGCTCACGTAAGAACGAAACACGCAGAGCAAAACACGTTTGAATGCACGAAGTGTAAGAAAAGATACGTGTCGAAGTACCGTCTTAACCGGCATTTAAAGACACATACAGGGAAGGGCTTTCAGTGTTCTATGTGTGGGCAGACATGCCCGACTCAGACAATATTGAAGTTTCATGTCAGAACGCACACTGGCGAAAAGCCGTTCGAGTGTGATGAGTGTCACAAAACGTTTGCTCGCAAGGACGCTATCAGTTCGCACATGAAAGTGCACACGAAAGTAAAACCGCATCAATGCCACTTGTGTGGTTACGTTTCGAGCTACAGAACTTCGTTGCTGCAGCATTTTCGGACGCATTCAAAACCATGGCAGTGTGCTGAGTGTCTGAAAAGATTTTCGTGTAACAGGGACTTTCAACGGCATATGCGTTCTCACACTGGTGAAAAGGCAACGAAGCGATTTCAGTGTGAAGTGTGTACAAATTGGTTCGTTTCTAGCACGACTCTGAAACACCACATGCGAATACATACAGGAGAAAAGCCGTACTTGTGCGTGGTGTGCGGAAGAAGATTCAGGCAAGACACCAGCCTCAAAATACACTTGGAAACACACGGCGGCAAAACGATCTTCCAGTGTAACGAATGTCAAGAATCATTCTCACAAAAGAACCACTTCATTCTGCACCAAAGACTGCATGCTGGTAAAAAAACCTACCAATGTTCTCAATGCGATAAACATTTCGTCAGTTCCAATGTGCTGACCCGCCACATGAGAGTGCACACAGGCGAAAAGCCGTACCAGTGTAGTGTGTGTCAGAAGAGATTTCAACAAAAGTCGGGTTTGAACACGCATTTAAGTTCTCACTCCGGTAAAAAGACTTTACAGTGCGACCAGTGTCACGAGACATTACCAAGCAAGAACCGTTTGATTGCGCATCGCAGATTGCACGCAGGAGAGCCGTTACATCACTGTACGGTTTGTAATAAAGAGTTTATTACAATCAGTTTGATGCGAAGACATATGAGAATACATAGCAAAGTTCAAGATAAAGAAGCAATATCGTAG
Protein Sequence: MMMEMESEVLEISVASSTQSCFTCLVAGRELSTLTEDSRPYYLDIIREIQQKSHSIVPVICWECEAVLRRWIRFREQVKHSYMTLQASVLNNSRGVFDNVTPCSPRLRLTHITHTDIQPRSHCQTRAEVTTDPLTKEVTAEAFHVEIADCFKEESGDGEDLDSTCNNAAPDDLKLTFNLKTECSDSGPVASHSWQVMAKIEEENTKSSAQEHGCTDSETLFFGLEQRIIQDSESFQKALDMEQHECKHCHKDFPTSAQYKSHLKTHTKPYRCGLCTKRFARRIAMKTHMTQHKSKHRNSSAYQCDECGLKVSCRNRFIAHVRTKHAEQNTFECTKCKKRYVSKYRLNRHLKTHTGKGFQCSMCGQTCPTQTILKFHVRTHTGEKPFECDECHKTFARKDAISSHMKVHTKVKPHQCHLCGYVSSYRTSLLQHFRTHSKPWQCAECLKRFSCNRDFQRHMRSHTGEKATKRFQCEVCTNWFVSSTTLKHHMRIHTGEKPYLCVVCGRRFRQDTSLKIHLETHGGKTIFQCNECQESFSQKNHFILHQRLHAGKKTYQCSQCDKHFVSSNVLTRHMRVHTGEKPYQCSVCQKRFQQKSGLNTHLSSHSGKKTLQCDQCHETLPSKNRLIAHRRLHAGEPLHHCTVCNKEFITISLMRRHMRIHSKVQDKEAIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -