Aalb023204.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- zfy1
- Assembly
- GCA_963457715.1
- Location
- OY735282.1:293256-303469[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.34 20 6.4 0.1 2 23 20 42 19 42 0.93 2 20 0.0011 0.064 14.3 0.5 1 23 49 72 49 72 0.98 3 20 0.0044 0.25 12.4 0.2 2 23 79 100 78 100 0.92 4 20 0.0041 0.24 12.5 3.4 2 23 109 129 108 129 0.97 5 20 0.0088 0.51 11.4 0.2 1 21 135 155 135 156 0.95 6 20 0.02 1.1 10.3 2.9 1 23 244 267 244 267 0.95 7 20 0.73 42 5.4 3.0 1 22 267 288 267 290 0.86 8 20 0.00028 0.016 16.2 0.7 2 23 302 324 301 324 0.96 9 20 0.0092 0.54 11.4 0.4 1 23 327 350 327 350 0.93 10 20 0.017 0.96 10.6 1.7 1 23 355 378 355 378 0.97 11 20 7e-05 0.0041 18.0 0.3 2 23 385 406 384 406 0.96 12 20 2.3e-07 1.3e-05 25.8 0.3 1 23 412 434 412 434 0.99 13 20 0.085 4.9 8.3 0.2 1 23 457 480 457 480 0.92 14 20 0.0071 0.41 11.7 2.8 2 23 487 509 486 509 0.94 15 20 1.1e-05 0.00063 20.6 0.7 1 23 517 540 517 540 0.95 16 20 4.4 2.5e+02 2.9 0.2 2 16 544 558 543 560 0.88 17 20 0.00068 0.039 14.9 0.2 2 23 571 593 571 593 0.96 18 20 1.1e-05 0.00063 20.6 2.2 2 23 600 621 599 621 0.96 19 20 2.2e-05 0.0013 19.6 0.7 1 23 627 649 627 649 0.98 20 20 0.04 2.3 9.4 1.7 1 23 655 677 655 678 0.95
Sequence Information
- Coding Sequence
- ATGTACGCTGACTTTGCTCGGCTAAGGAGCCACCAATCAGACATACATATCTCGAGCCAGTGTGGCGCGTGTGGCCAACTTGTACGTAACAAAGTTTCTCTAAAGATGCATACGGCAAGCGTGCACGGAGGAGACAATCATTCCTTCACGTGTGACGTTTGCGGCTACAGAACTGTCCGAGAAAACGATATGGAGAACCACAAACGCCGAGTTCATATCAGGGAGAGGACTGTAAAGTGCCCCGATTGCGACTTCAAGGCATTCAATAAAGGAGCACTGAATAACCACGCACAGAAGCATGTTAAAGACAATAATATGAAAACAGTGTGCCATATTTGCGGCAAGGAGTTACACAGGGACACTTTGAATTACCACTTGCGGACCCACACGGGCGACAAGAGATACGTGTGCCAGCTGTGCGGCAGCGCGTTTGTGCAGAAGATAAGCCTCGACCACCACGCGAGGAAGTGTCGCGGACAATACAACCAGTTTATTGCGGCGAATGACATCAAAGATGACAAGAAAAGTGCCGTGTTACTGACCTACCTGACGGAGCATGCGCACCGCTTGTTGGTGAAGTTGGTTTACCCATTGAGTGTCGACACGCAGACACAGGGGGCGCTGGTGACATTACTCGGCAAGAATGTTACACCTAAAACGTACGCCCTAGACGCAGTGACCCTCAGCAGTGACGAGTATGCGACCTTCATATACCACAATAAGACGATGTATCGTTGCGCCCGATGCAACACTTCCTACAGCTTCATTCACAACCTCAAATCACACTTCATCAAGGCGCACCAGTGTGCGCACTGCACACTAACATTCGACACCAAGCGCCTGAAACTGAACCACGAGGCGCAAGCCCATCCCGAACACACGACCGTAGTTAACCAAAGAATTTCCTGTAAAATATGCGAAAAAGAGTTCAAGAATATCGCTCGTCTGAAAGACCATTTACGCAGATACCATAGACAATTTCCGTGTCGAATATGCAAAGCGGAGTTTCCTACCGTCGGGCAGCTGCACAAGCATCAGTACGAAGCTCACGGGAAAGAGAAACACAAATGCCGAGCGTGCGACTTCGAGACGATACAACAGAGTTACCTCAAGGAGCACGTCAGACGCGTTCATATGAGCGAGAAGCACGTCCAGTGCCCGGTGTGTCAGAAACAGTTCTACAACAAGGGTACATTGAACGACCACTTGGTGCGTCACACGCGCGAGAAGAAGTACGAGTGTAAGGTGTGCGGGAAAAGCTATCCGAGGCTGGGAACTCTCAAGATGCACATGCGCATTCACACGGGCGAGAAAAGGAAGCTTCACGCCTACATCGGCAAAGCGGCGAACCGTGACACGAACAAGAGGCACGCCTGCCGCGCCTGCGAGGCCGCCTACGCGAGACTCTCCGACCTAAAGAATCACGTGACCAGAGCGCACCTCAAGATCAAGACAATACAATGCAATGAGTGCCCACAAACCTTCATGTACCACAGCCAGAGAAAGCAGCACATGAGCCAGACACATGCCACGACCAATCTCGACGCGTTCGAGTGTGAACTGTGCAAGAGATCATTTAAACGAAAGAACACGCTCGCCGAACACATGATGGACATTCACATCCTGAAGAAATGCAGCGAATGCGACGCGAAGCTCGCGAGAAAGGCGTATTTGTACCACTTGAACGAAATCCACGGGAGAGCAATGCCGACTTGCGGTATATGCGGGTTGAAAACACCCAAAGAAAGTTCTCTGATAAGACACCAAAGGAACGTGCACTTGAAAGAAAAGAACATAAGTTGCACCGTCTGCGAGAAGAAGTTCTGCACACGATCCAACTTGCTGGACCACATGGTGACTCACGACCAGCGACGCGTGTTCCAGTGTGGGGTGTGCGAGAAAGCATTCGCGAGGAAAGAGTGCTTGCGGGCGCACGGGAGACTCCACACAGGCGAGAAGCCTTTTGTGTGTGAAGCATGTCCCGTGACGTTCGTGCACAGAGCCAGCCTACGCTTCCATGTGCAGACTCACCACGGGAACATAGAAAATAGAGCGTAG
- Protein Sequence
- MYADFARLRSHQSDIHISSQCGACGQLVRNKVSLKMHTASVHGGDNHSFTCDVCGYRTVRENDMENHKRRVHIRERTVKCPDCDFKAFNKGALNNHAQKHVKDNNMKTVCHICGKELHRDTLNYHLRTHTGDKRYVCQLCGSAFVQKISLDHHARKCRGQYNQFIAANDIKDDKKSAVLLTYLTEHAHRLLVKLVYPLSVDTQTQGALVTLLGKNVTPKTYALDAVTLSSDEYATFIYHNKTMYRCARCNTSYSFIHNLKSHFIKAHQCAHCTLTFDTKRLKLNHEAQAHPEHTTVVNQRISCKICEKEFKNIARLKDHLRRYHRQFPCRICKAEFPTVGQLHKHQYEAHGKEKHKCRACDFETIQQSYLKEHVRRVHMSEKHVQCPVCQKQFYNKGTLNDHLVRHTREKKYECKVCGKSYPRLGTLKMHMRIHTGEKRKLHAYIGKAANRDTNKRHACRACEAAYARLSDLKNHVTRAHLKIKTIQCNECPQTFMYHSQRKQHMSQTHATTNLDAFECELCKRSFKRKNTLAEHMMDIHILKKCSECDAKLARKAYLYHLNEIHGRAMPTCGICGLKTPKESSLIRHQRNVHLKEKNISCTVCEKKFCTRSNLLDHMVTHDQRRVFQCGVCEKAFARKECLRAHGRLHTGEKPFVCEACPVTFVHRASLRFHVQTHHGNIENRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -