Aalb023320.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735282.1:1446259-1453804[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 2.4 1.4e+02 3.8 0.0 2 23 112 134 111 134 0.89 2 34 0.00039 0.023 15.7 1.5 2 23 155 177 154 177 0.96 3 34 0.00092 0.053 14.5 4.4 1 23 183 205 183 205 0.97 4 34 0.33 19 6.5 2.0 1 23 272 295 272 295 0.95 5 34 0.0084 0.49 11.5 0.0 3 23 324 345 322 345 0.96 6 34 0.075 4.4 8.5 0.5 3 23 369 391 368 391 0.94 7 34 0.045 2.6 9.2 0.1 1 19 396 414 396 417 0.90 8 34 0.053 3.1 9.0 1.0 1 23 424 447 424 447 0.89 9 34 0.00055 0.032 15.2 1.6 1 23 452 475 452 475 0.97 10 34 0.0016 0.09 13.8 5.1 1 23 480 503 480 503 0.97 11 34 0.00038 0.022 15.7 1.4 1 23 557 579 557 579 0.95 12 34 0.23 13 7.0 0.6 3 23 608 629 606 629 0.94 13 34 0.035 2 9.5 1.4 1 23 649 672 649 672 0.96 14 34 0.00048 0.028 15.4 0.6 1 23 677 700 677 700 0.97 15 34 0.019 1.1 10.4 0.4 1 23 705 728 705 728 0.95 16 34 0.033 1.9 9.6 0.9 2 23 731 753 730 753 0.95 17 34 0.065 3.8 8.7 1.4 1 23 838 861 838 861 0.95 18 34 0.033 1.9 9.6 0.0 3 23 890 911 888 911 0.96 19 34 0.00033 0.019 15.9 0.1 3 23 935 956 933 956 0.96 20 34 2.4e-05 0.0014 19.5 1.6 3 23 963 984 961 984 0.93 21 34 0.0062 0.36 11.9 0.1 3 23 990 1011 989 1011 0.92 22 34 0.16 9.4 7.5 0.4 1 23 1016 1039 1016 1039 0.96 23 34 0.00055 0.032 15.2 4.6 1 23 1043 1066 1043 1066 0.97 24 34 0.00027 0.016 16.2 0.2 2 23 1073 1094 1072 1094 0.96 25 34 0.34 20 6.4 3.5 1 23 1146 1169 1146 1169 0.97 26 34 5.1 3e+02 2.7 0.1 2 23 1200 1222 1199 1222 0.93 27 34 0.019 1.1 10.4 0.8 2 23 1245 1267 1245 1267 0.96 28 34 0.006 0.35 11.9 3.6 1 23 1272 1295 1272 1295 0.97 29 34 0.00062 0.036 15.1 2.8 1 23 1300 1323 1300 1323 0.96 30 34 0.28 16 6.7 0.2 1 23 1328 1351 1328 1351 0.91 31 34 0.00028 0.016 16.1 0.4 2 23 1359 1381 1358 1381 0.97 32 34 0.0084 0.49 11.5 0.2 2 23 1388 1409 1387 1409 0.96 33 34 0.00074 0.043 14.8 6.5 1 23 1415 1437 1415 1437 0.98 34 34 0.00035 0.02 15.8 2.7 1 23 1441 1464 1441 1464 0.98
Sequence Information
- Coding Sequence
- ATGCACAAAAAGGCTAAAGGTCCGCCGAAACCCAAGTTCGTACCAATTGAAAAGAAAAGTGACAACCAGCAAGATCAATTCTCTTTTGCAGATGGTAGCACACCGGTGACCCCCGCCCATAACATCTCAGTCGCGAGAAGGAAAAACTTACAGATCTTACTAAACCATACCACTATAATACCTTTCATATGGTGCAGAACCATCCTTTGCTTTTATTGTGGAGAAAAAATCACCGAAAAAGATATTAGAGAGCACACGGTTGGACATGGTAAAATGTCTGATTCTGATATTCCGAAGCTGGTCAGTCAACAAAAACTTGACGTATCGGAGATTACTTGCGAAGTATGCAGAGAACCCTTCGATACTGTAGGAGAAATTATAGACCATCTTATAGGCAAACATAAGTTAGATTACGATAAAGGTAGAGAACTACTATTGGAGCAGTACAAACTTGTAGATTTGAGATGTAGAATTTGTCAGAAGACGTTCAAAGACTTTATATTTCTGGCTTCTCATATGAGAAAGGATCATCCTAAGGACGGATATTACTTTTGTGACTACTGTGACAAAACGTTTCGCGACAGACATGGGTTGTTTGGTCATTCCAAAAAACATAGAAAGAGTGCGCTTTTATCTAAACcggatagttttaaaaaggaACCTAATGATGATTCGGTTTCGAGCAGTATCAGCGCTGATGATAACAGTAACTGTGAAGTTAACAAAACGGACAAAAACTTGAAAAGACTGAGAGAGAACATAGCTCTTGTGCTGAACATGTCAACGGCAACACCTTTCAAGTACTCTTCCAATTATGTCTGCTTTTATTGTAACGAGGATTTCGCAGAAATGTGTAGACTAAAGAAACACACTATCTCAGAACATCCACACTGTGATGTCAATAGTGAATCTATGAAAACTGTGATGGGGCATCGTACGTTTGTTAGAATCGACATTGCAGAATTAGCTTGTAAAATTTGCGGACTATCTTTAGAGTCACTGGATGATCTAATCGACCATCTCATTACGGAGCACGATGCTAATTATGAGAAATCTATTAAAGGCTGCGTTCAACCATTTAAAATATTGAAAGACAACATGCTTTGTCCATTATGTCCTGATGAATCCTTTCGTCATTTCTCACTGTTGATAAGGCATTACAATCTGGCGCACGTCGCCAGAAATTACATATGCTCAAAATGTGGCAAAGGCTTCGCCAGTGTCTCAATCCTCCAGAACCACAATCAGCTGTCTTGTCAAGCCGCCGaccatttttgctcgatttgCAATCAAAACTTTTCTAACGCCAGCATTCTACTAAGGCACAACGCCAGGGTCCACGACGCAAAAGATTTCAGATGCGGCATTTGCGGCGAAAAATTCTCGACCCATTACATGAAACTGAAGCATATGATCAGTGCTCATAATACTGGCCAGCACACTTGCACGCACTGTGACCGTgtattcacaaaaaaaaatgtcatgaTGAACCACATTCGGAAGGACCATCTGAAAGAAAAGAACATAGCCTGTACGCAAGATCCATTCTCTTTTGCAGATGGTAGCGCCCCGGTGACGTACGACCGATGCACCTCTAACAAGAGGAGGCAAAACTTACAGAATCTGTTCAACAATACCACCATAATACCGTTCAAATGGCGCGGCAGATATCTCTGCTTCTATTGCGGACGAGACTTTACGGATTACAAAGAGTTGAGGTCGCACACGCTCTCCCATGGAAATTGCTCTGTTTCCGATTACTCTCTAAAACTAGTGAAGGGTGCCCATATAGAAGTCAAACTGGACATATCGGAGACTAACTGTGCGATATGCTACGAGCCGTTTAGCAATTTATGCGAGATTATACGCCATTTGAAAGGGAAACATAAGGTGAATTATGACGAAAATGTGGAGATACTTTTGGAGGAGTACAGTTTGGTTGATCATAGATGTCTTGTTTGTCAGCAGAGGTTCCCATTCTTTGGTTATTTGGTATCGCACATGAATAATGTGCATCCAAGGAACGCGTATATTTGTGATGATTGCGGTCTTTCGTTTAATAAGAAAAGAGATATGGCTGTTCATTTCAGAAGCAAACACAAGCCTGGAGGGTACCCTTGTGATGAGTGCTCTGAGGTACTTTCGTCTCTGAACGAGTTAAAGATCCACAAAAATCATCTCCATACGATCAAATGCAAATACTGTACTCTAACCTTTCCGTCATTAGCTCTGTCACGGAAACACATGAAATATGAACACAAAGACGACAATGCTAAGAAATGTAAACACTGCCTAAAAGAATGTCATTCGAAATTGGGTCTCCAGCAACACCTTTCAAAATGCAAAGTTAAGAAAATAACACAAGAAGCGAGTGATCCTAAACCCAGTATTTACACAGACGCGGACTGCTCCAAGCCGATCATACCCAAACAGAATGTCACACGAATCAGAGAGAATATCGTCAGTATACTAAACTCGTCCACCGCTACGCCTTTCAAGTTCTTCACCAAATACCGCTGTTACTACTGCAGCAGCACCTTTGTCGAAATGAGCAGCTTGAGGGAGCATACCTACTCGGAACACCCCATCTGCGATGTCAAATGTAAATCCATCAAAACTTGCAAAGGCGAACGCATTTGCGTTAAAATAGACATTGCTTATTTAGCGTGTAAACTCTGCGGCTTATCCCTAACGGAATTGGATGATTTGATCGACCATCTCATAACAGCACACAAAGTCAATTACGACAAGTCTATTAAAGGTTGTTTGCAACCGTTCAAAATACTAAAAGACAACATCGCCTGCCCACTGTGCCCTGAAGTCTTCCGTTACTTTACAACCCTTCTAAAGCATATGAATTCCGCGCATACTAACAACAATATCATATGCTCGTACTGCGGTAAATGTTTCCGGCAAATAACCAATCTTCGCGCCCATTTATCGTACAGCCATTCCAACGATAATGCATGCACCGTCTGCAATATAAACTTCAAAAACGCCGCGAGCCTCGCACGTCATAACGCCAAGCTACATGATGCGAAAGACTACAAATGTCGAGTGTGCGGCGACAGATTTGGGTCTGAATACATGAGGCAAAAACACCTCATATCCGCACATAACACTGGGCACAAATGCACGTACTGTTCCCGAATGTTTACACGAAACTCATTCATGGTAGACCACATCCGACGCACGCATTATAAGGAGAAAAACGTTCCGTGCTCCGTGTGTGGTGAGAAATTCTTTGATAACTATCTGCTGAGGATGCATATGGTGAAACACGATGGCGAGCGGAAGTTTCATTGTGTCACGACCAATACGGAGGACAAGTTTAAGAAAGCGGCGCTAGCCCGACAACTCGTGATGAAGCGACGAAACATTGAGTATATCTTACAATACGGTAACGTGACTCCCTTCCTCTGGGCCAAGGGGCGATTCAAATGCTTCTACTGCAAGGAAGTCATCAAAGAGCACAGAACGCTAAGAGAACACACCAACAAAGTGCACGAATTCGCTAATCTAGAACTAGTCGTCCACGATAGGACGATGAACAATAGAAATAAGGATGCAGCTGTATACATCGACGTGGCGGACATATCCTGCAGGCTGTGCACGAAGGAGATTGACGGTCTGGAAGAATTGATTCACCATTTGATAATAGCACACGACGCAGAGTACGATATGAGTGTTCCGAACTGTGTTCTTCCTTTCATTTTGGACAGCGAATCACCAACTTGTCCGACCTGCAACATGAAATTCGCATTCTTCGAATATCTGCTACGACACGCAAATAAGAACCATCTCTCCCACAACTATATGTGTGACGTGTGCGGAACAAGCTTCCAGGGCGAGAACCATCTAAGAATGCATCACAGATACTATCACAGAGAAGGTGGTTATCAATGCACTCATTGTGAAATGTCGTTTTCGACGCTCTCAAAAATGACGCAGCACGAGAAAAATGCTCATCTAGTGAAGCTGTTTAAATGTCCGCAATGTCCGGATATGTTCAAGAGTCCTTACGTGAGGAGGATTCATCTGGCCAATGTGCACAGCGTAGAGGAGATGAAGATCAAGTGTCCGCACTGTCCAAAGGTGTATCCTCAAGCGAGTATCATGTCCCGGCATATGAGAAGGGTGCACTTGGGCGAGAAGAACGTCGAGTGCGAAGTATGTGGCGACAAATTCTTTGGATCTTACGACTTGAAGCTGCACATGCTGAAACATGGAGGGGAGAAAAAGTTCATGTGCTCCACTTGCGGaaagaagttctacaagaagtGCAACTTGAAAAACCATTCGATGACTCACAGCAAGAATTTTGTTTGCGGGATTTGCCATAAAACGTTCGGGCTTCACATTAATCTAAAGGTGCATATTAAGACTCGGCATCCGGAATATCAGTACATCCAGACGCCTCAGGAGATTTCAGGGATTGAGGTGATTGAGATTCTGAATGCTAACTTCCCGGTTGACGTCACTGAGGAGAATGCTGAGTACTTGGAGCTTGAGACCTCCAATGTCTAG
- Protein Sequence
- MHKKAKGPPKPKFVPIEKKSDNQQDQFSFADGSTPVTPAHNISVARRKNLQILLNHTTIIPFIWCRTILCFYCGEKITEKDIREHTVGHGKMSDSDIPKLVSQQKLDVSEITCEVCREPFDTVGEIIDHLIGKHKLDYDKGRELLLEQYKLVDLRCRICQKTFKDFIFLASHMRKDHPKDGYYFCDYCDKTFRDRHGLFGHSKKHRKSALLSKPDSFKKEPNDDSVSSSISADDNSNCEVNKTDKNLKRLRENIALVLNMSTATPFKYSSNYVCFYCNEDFAEMCRLKKHTISEHPHCDVNSESMKTVMGHRTFVRIDIAELACKICGLSLESLDDLIDHLITEHDANYEKSIKGCVQPFKILKDNMLCPLCPDESFRHFSLLIRHYNLAHVARNYICSKCGKGFASVSILQNHNQLSCQAADHFCSICNQNFSNASILLRHNARVHDAKDFRCGICGEKFSTHYMKLKHMISAHNTGQHTCTHCDRVFTKKNVMMNHIRKDHLKEKNIACTQDPFSFADGSAPVTYDRCTSNKRRQNLQNLFNNTTIIPFKWRGRYLCFYCGRDFTDYKELRSHTLSHGNCSVSDYSLKLVKGAHIEVKLDISETNCAICYEPFSNLCEIIRHLKGKHKVNYDENVEILLEEYSLVDHRCLVCQQRFPFFGYLVSHMNNVHPRNAYICDDCGLSFNKKRDMAVHFRSKHKPGGYPCDECSEVLSSLNELKIHKNHLHTIKCKYCTLTFPSLALSRKHMKYEHKDDNAKKCKHCLKECHSKLGLQQHLSKCKVKKITQEASDPKPSIYTDADCSKPIIPKQNVTRIRENIVSILNSSTATPFKFFTKYRCYYCSSTFVEMSSLREHTYSEHPICDVKCKSIKTCKGERICVKIDIAYLACKLCGLSLTELDDLIDHLITAHKVNYDKSIKGCLQPFKILKDNIACPLCPEVFRYFTTLLKHMNSAHTNNNIICSYCGKCFRQITNLRAHLSYSHSNDNACTVCNINFKNAASLARHNAKLHDAKDYKCRVCGDRFGSEYMRQKHLISAHNTGHKCTYCSRMFTRNSFMVDHIRRTHYKEKNVPCSVCGEKFFDNYLLRMHMVKHDGERKFHCVTTNTEDKFKKAALARQLVMKRRNIEYILQYGNVTPFLWAKGRFKCFYCKEVIKEHRTLREHTNKVHEFANLELVVHDRTMNNRNKDAAVYIDVADISCRLCTKEIDGLEELIHHLIIAHDAEYDMSVPNCVLPFILDSESPTCPTCNMKFAFFEYLLRHANKNHLSHNYMCDVCGTSFQGENHLRMHHRYYHREGGYQCTHCEMSFSTLSKMTQHEKNAHLVKLFKCPQCPDMFKSPYVRRIHLANVHSVEEMKIKCPHCPKVYPQASIMSRHMRRVHLGEKNVECEVCGDKFFGSYDLKLHMLKHGGEKKFMCSTCGKKFYKKCNLKNHSMTHSKNFVCGICHKTFGLHINLKVHIKTRHPEYQYIQTPQEISGIEVIEILNANFPVDVTEENAEYLELETSNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -