Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963457715.1
Location
OY735273.1:4797648-4800011[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.14 2.4e+02 2.5 0.0 19 33 230 244 213 248 0.87
2 6 2.4e-10 3.9e-07 30.6 0.1 1 45 264 310 264 311 0.94
3 6 2e-11 3.3e-08 34.0 0.4 2 44 318 364 317 366 0.92
4 6 4.3e-14 7.1e-11 42.6 0.0 1 43 369 411 369 413 0.97
5 6 9.4e-10 1.5e-06 28.7 0.0 3 45 423 467 421 468 0.93
6 6 1.2 2e+03 -0.5 0.1 28 42 754 767 748 770 0.78

Sequence Information

Coding Sequence
ATGGACCTGGACAGTGATCTCAGCAGCAGCAGCGATGAGGAGGCTGAGATGCAGAATATTATGCGGCTAAAATCCGTGGTGGCAGACGATAGATCTATCAGTGCCTGGTCTGGTGCATACTCCGACTCCACAGCAACCACGGCGACGACTCTGAAGCCTGCATCCATCATTACCAAGATTGAAATCGCTTTAGGTCTGAATAAATTACAAGAAGAGAAACTTGCAAGACTAGAGAAAATACTTGCTGGCAGATTGGAAGACTGTCGTCAAAAACTAGCTTGTTTCCAACGCGTGTATATTCGGGAGAAGGCTAAAACATCTAAGAAAGAGGACTCGTTCAAATTAATTCATTGTGGCAGGCCTTACTTTAAAGACTCCAACTTCTTCCGAGCCCCTGACAACCAAGACACAATCACCATGAAGAATTTAGGAATGTATGATCTTGCCAATTTAATCTCTGCGCCGGGATGGACAGTCACAGACAAGAATGAGTTTTGCAGTATAATGCTCAAAATGTCCAGAGCCAAGAAAAAGGAACAGTTACAGTCTCTCCTGAACCAATATAATAGAGAAACTGATAATAAGGATCATTTAATTAATCCATTGCAGAAGAAAATAGATACAGTTATGATTGAAATAAAAGAGTTGGTCAACAAGGATCTGTCTCAACTAGCAATGCCGATTGAATATGAGTATGACTGGGATACAATTTCAAACCAGTTAAACAATAGACACAGTGCAATGGAGTACCAAGGTCTCTGGAAAGTGTTCCTCCACCCATCCATCAACAAAAGTAGCTGGACTGCTGAAGAGACCAGTAAACTGCAGACTTGTGCAAAAGCTAACAATCTGCACAACTGGGACAAAATCGCCAATGAACTAAACACTGGAAGGAGTGGATATCAATGCTTTGTGTACTTCAGAACTAACATGAGCAATATTGCCATTGGGAAGAAATGGAcattagaagaagaagaatacctCAAAAGACTGGTTGAGCATTACAGACAAGACAGTTACATACCCTGGAGCAAAATAGCACCTAAAATGCAGAACAGAACTAAGATCCAAATCTATAACAAGTATATCCGAATACTTTATAAGAAGGGTAGGTTTCTTCCAGAAGAAGATGCTGTTCTACTGACTTGTGTCAAAAAATATGGAAACGATTTCAGGCACATATTGAAATACCTTAATGGACGTACTATACAGCAACTGAAAAACCGTTACAAGGTGCTAGCCAACAATGCTAACCGAATCTCCAAAGTTTGGACTGTTGAGGAAGACAAGAAATTAATTCAGCTGATGGCTAATCAGGATGCTGGCTCAAATTACTCTGACATTGTCAAGCACTTCCCTGGGAAGGAACGAACTACCATAAGATCTCGGTATATCACATTAATGAAATGGATGAAACATCATCCAAAGCAGAGCATTGAGAATGCACCACGTCGGGGAGCCCGTCGCCTGGCCCATGGACGAGAAGCCCCTGACTTGACAAATGCTCTGACAACATTGAAGCACCGGATGGAGACAGAGTTCATCACACAGCATAGAAAAGGAAGAATAACAGTTAAGTCACCAGAAGAAGTTATTGAAGATGCCATCAAGGTTGCTTTGGTAAATGAACTAATTTACGAGGAGCAGGTTGCTGCTTCACAAGCTTACGATGTGGTGCCACAAACCAGCAATAATTCATCTGGCTCTTCCACAAAACGTGACACAGacaaattacataaattgtTACTTTTACTTCGTTCAAGAATGgacaaaagtaagtttgaacaGAATGAAATGCTGGCCCCAAGATTTTCAAGCCTGGTAGATGATGATGAACCAGTACAGCTTCCACAATTCAGATCTTATTCCAAAAAAAATCAAGTTTTGCTTGTGAATCACAAAGAGAAACTGAGCATTTGGGGTAATGATCAAACTCTCACAACAACAGAGTATGCTTTGCCACCTAATTTTGCAACTATAACAGGATGCAAGAAACTAATGGCTTATGCGAATGCTAGTACAACCTTTGATTTAATAAAGAACTTAGCTGCTTTCAAGAGGAACACTTTGTTCAAGGAACATTGGATGAGATTTTTGGACCGCTTCCATTTCTTGTTTATTTGGCCAATGATGCTCTCGAACGGGCCCCCTACCGAGCCCAATACAGGTGACGCCACTGCAAATCACATCAGAAACGTGGAACACCGACAAATAGGGCTGATGAATCCCAACAATGGAATCACCATACCGAACTCACTGAGACACTTGAATAAATGTACTAGTAATTGTAAAAATCAATTAGACAATGCTATGATTATAGAAGAATATGATAGACGCATCTCTGGAGAGTTAAAATTTACCTAA
Protein Sequence
MDLDSDLSSSSDEEAEMQNIMRLKSVVADDRSISAWSGAYSDSTATTATTLKPASIITKIEIALGLNKLQEEKLARLEKILAGRLEDCRQKLACFQRVYIREKAKTSKKEDSFKLIHCGRPYFKDSNFFRAPDNQDTITMKNLGMYDLANLISAPGWTVTDKNEFCSIMLKMSRAKKKEQLQSLLNQYNRETDNKDHLINPLQKKIDTVMIEIKELVNKDLSQLAMPIEYEYDWDTISNQLNNRHSAMEYQGLWKVFLHPSINKSSWTAEETSKLQTCAKANNLHNWDKIANELNTGRSGYQCFVYFRTNMSNIAIGKKWTLEEEEYLKRLVEHYRQDSYIPWSKIAPKMQNRTKIQIYNKYIRILYKKGRFLPEEDAVLLTCVKKYGNDFRHILKYLNGRTIQQLKNRYKVLANNANRISKVWTVEEDKKLIQLMANQDAGSNYSDIVKHFPGKERTTIRSRYITLMKWMKHHPKQSIENAPRRGARRLAHGREAPDLTNALTTLKHRMETEFITQHRKGRITVKSPEEVIEDAIKVALVNELIYEEQVAASQAYDVVPQTSNNSSGSSTKRDTDKLHKLLLLLRSRMDKSKFEQNEMLAPRFSSLVDDDEPVQLPQFRSYSKKNQVLLVNHKEKLSIWGNDQTLTTTEYALPPNFATITGCKKLMAYANASTTFDLIKNLAAFKRNTLFKEHWMRFLDRFHFLFIWPMMLSNGPPTEPNTGDATANHIRNVEHRQIGLMNPNNGITIPNSLRHLNKCTSNCKNQLDNAMIIEEYDRRISGELKFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00162709;
90% Identity
-
80% Identity
-