Aalb007360.1
Basic Information
- Insect
- Argyresthia albistria
- Gene Symbol
- -
- Assembly
- GCA_963457715.1
- Location
- OY735257.1:12121871-12123919[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-10 1.7e-07 31.3 0.1 1 44 12 56 12 57 0.92 2 2 5.6 3.3e+03 -1.6 0.0 23 31 98 106 98 106 0.84
Sequence Information
- Coding Sequence
- ATGGCTGACTCTAAAATAAAACGTGCAACATGGACGGAACACAATTTAGCAGCGGCAGTCCGTGATGTACGCAGTGGGAAACTATCATCATACAAAGCATCCGCTCAATATGTTATTCCAAGAAGAACTCTCCGAAATCAATTAAAAAGTGGTAGTATTCAAAAGAAATTAGGAAGAAACACTATACTCACTCGAGATCAAGAGAAAGATTTCGTTGGAAGGATCATAAAATTTGCTGAACTGGGTGTGCCCTTTACCCCAAAAATGATTCGATTTCAAGCGTACGCGTTTTGCGAAAAATTTGACATCCCACACAACTTTAACACGGAAAAGAGAATCGCGGGGAAGGGATGGCTGCGAATGTTTTTGGAAAGAAACCCAACCATAGCGAAACGTAAAGCGCAATTTCTAAACGCAGCTCGAGCccaaaagttaaataaacatATCACGGACCACCACTTCCAAGAAATCAAAAAAATTTACGATGAACTGGATCTGCACGACCATCCAGAAAGGCTTTATAATATGGATGAGAAGGGCTGCAGGCTAACATTGCACCGTCAACCAATTGTGCTTGCTGAAAAAGGAGCTAAAAGAGTGCACATGCAGGCATCAGAGCACGGAGAAAATGTAACCATCGTGGGTTGTGGTAATGCTCTTGGGAATGCCATACCTCCAATGATTATATTTAAAGGAGTGAGAAATAAGCCAGAGTATGATGAAAATCTACCTCCAGGATCAACAGTCCGAATGGCAAAAAAGGGAAGTATGACGACTGAGTTGTTCATAGTATTTATACAACACTTGGCCAAATTCAAGACTTTCGGGAAATGTCTGCTCATATTTGATGGTGCAAAATGTCATCTGGACTTTCGCATCGTGGAAGAGGCAGAAAGACACGATATTGTGCTATATTGTCTGCCATCAAATACGACACACGAACTGCAGCCTATGGACAAGTCTTGTTTCAAACCATACGAAACATACTGGGACCAAGAAGTATTGAATTTTATGTATGAAACACGACTCAAACAGGTGTCAAAGGAAAACTTCAACGTTATTCTGACCAGGGTATGGTCTAAGTGCATGACACCTGCAAACATTACGAGCGGGTTCAGAGCTACAGGATTATACCCATTAAAACCTAAGGCAATTCCCGAAAAAGCTTATGCCCCTTCCATATTGACAGAGCGCCGGATTCCCACCGAACAGAATAATGATTCTGCACAGCCACATACAGAACCTATACCAATATCACATCGTGATGATTGTCACAATTCCTCTGATACAGCCGAAACTGAAGCTAGCTCTCGCTCGTCGTCACCGATTGCCACCCTCCGAGAACTTGAAAATCTCATTTCAGCATCACATCTACCGTCAGCACCTTCAACACCAGGTCTTGATTTCCTGCAAGAATTTTCTTCTGTGGGCCAGAAAACTCCAACTTACGCAGAGATAAACGATGTAGATTTTTTTGAACCTGTTCCTGGGACAAGCGGACTACAACAAGCCACCCGGCGGCGTCTTGTAGAGTACAGCGATAGCAGCGACAGTGAATCTTCTGAAGACAACATAATGACCCAATTCATAAACCGGTCTCTTCCAGTAAAACAAAACAGAATATACTCTGACTCTTCTTCAGAAGAAGAGACCGAAGATAATGTGCCTTTAGCAACAATATCCACGAAGACACCTTTTCAGAAATTTATACCTACGCCTGACTACGGACAAGTTAAAAGTCAACCCcggaaaaaagcacttaactaCAAAGGACAAAGAGTGACCAAAGATCTTTTCaatgaaaaagaagaaaagaaaaagaaacaagtGAAGAAGAAGATTCCAAAGAAAACTAAAGGTAAAACTGCCAAAACTGCAAGAAAAGAGTCGAAATCTCCTGAAGAACGCTGGTACTGCCATGCTTGTGAAGAAGATTTAGTGGCAGATATGAGACCATGTCGCGATTGTCATAGGTGGTATCATGAAGTTTGTATTGGTCTAACCAAAGACGATTCAGATCCGTTTTTGTGCCCCGATTGtgatatttga
- Protein Sequence
- MADSKIKRATWTEHNLAAAVRDVRSGKLSSYKASAQYVIPRRTLRNQLKSGSIQKKLGRNTILTRDQEKDFVGRIIKFAELGVPFTPKMIRFQAYAFCEKFDIPHNFNTEKRIAGKGWLRMFLERNPTIAKRKAQFLNAARAQKLNKHITDHHFQEIKKIYDELDLHDHPERLYNMDEKGCRLTLHRQPIVLAEKGAKRVHMQASEHGENVTIVGCGNALGNAIPPMIIFKGVRNKPEYDENLPPGSTVRMAKKGSMTTELFIVFIQHLAKFKTFGKCLLIFDGAKCHLDFRIVEEAERHDIVLYCLPSNTTHELQPMDKSCFKPYETYWDQEVLNFMYETRLKQVSKENFNVILTRVWSKCMTPANITSGFRATGLYPLKPKAIPEKAYAPSILTERRIPTEQNNDSAQPHTEPIPISHRDDCHNSSDTAETEASSRSSSPIATLRELENLISASHLPSAPSTPGLDFLQEFSSVGQKTPTYAEINDVDFFEPVPGTSGLQQATRRRLVEYSDSSDSESSEDNIMTQFINRSLPVKQNRIYSDSSSEEETEDNVPLATISTKTPFQKFIPTPDYGQVKSQPRKKALNYKGQRVTKDLFNEKEEKKKKQVKKKIPKKTKGKTAKTARKESKSPEERWYCHACEEDLVADMRPCRDCHRWYHEVCIGLTKDDSDPFLCPDCDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -