Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963457715.1
Location
OY735267.1:10347230-10349668[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-23 6.1e-20 71.9 0.1 3 89 94 176 92 176 0.94

Sequence Information

Coding Sequence
ATGGATAACAAAAACATTCAGAAGAATGCGATGCAGACAAGCGTGGAGTTTACTTTTACTCCGCCTCCCGAGGCTCCCGTTTTCGAGCCTACGGTCGAAGAATTCGCTGATCCTCTGGGATACATCGCCAAGATACGCCCTGTTGCTGAGAAAACTGGAATATGCAAGATAAAGCCCCCTGCGCGCTGGCAACCACCGTTTTCACTCGACGTAGACAAATTGAAATTCGTCCCACGGATACAGAAACTCAACGAGCTAGAAGCCATTACGCGTTTGAAACTTTTATTCTTGGAAAAAATCCTGAAGTTTTGGGAACTTCAAGGGTCGCCATTGAAGATACCCATGATCGAAAACAAAACATTAGAcctgttttgtttgaaattttGGGTCGATGAAGAAGGAGGCTTCGATACATGCAAGTCGCCAAAGAAATGGCGCAAGATCGCTCACGAAATGGGTTACAGCCAATGTGCAAACACAATGAATTTTCTCAGAAGCAACTATGAGAAAATACTCCTACCATATGAAATTTTTGAGAAGAGTAAAGCAGATATCCTAAAAACAGTGAAAAAAATTGAACCTAAAGTTGATCCTAAAGAAGAAGATGAAACAAAAGGTCTTTTCAAAGAAGTTCCAATTGAACTAATCACAACTATTAAGTCTGAAGACAGTGTAAAAGAGGAAAAGCCTTGTTCAAATATCAAGAAAACAAAAACTGGGTCTGATCATATAAAAACTGAAGCAGAGACTTCCAAAGTCAAAGTTGAAGAAGAGAAACGTAGTAGAGAACTCAGAAGACTGGCTACTTATGGCCCTGGTCCTAAGATGCCAGGCCTCAATGATGAAGAGTTTGATATAACAAAGTCTAGAAAGAGACCCCGTTATGACATGGATCCATTGGCTATTTACACATGTGCAATTTGTCAAAAAGACCATAGGGATGATCTACTTCTTATCTGTAATGGTTGCTCAGATACATACCACACTTTTTGCCTGAAACCACCCTTAAACATTGTACCTGAAGGGCATTGGAGATGTCCATGTTGCATTTCTGAAGAGGTCCACAAGCCAGCTGAAGCCTTTGGATTTGCTCAAGCTGAAAGAGAATACACACTCCAGCAATTTGGAGAAATGGCTGATAAATTCAAGTCAGATTACTTTGGCATGTCTGGCCATTTGGTACCTACTAATGTTGCTGAGAAAGAATTTTGGAGAATCATTTCATCTGTTGAAGAAAATGTCACTGTAGAATACGGAGCTGACCTACATTCCATGGACCATGGGTCTGGATTTCCCACAAAGTCTTCCCTCAATCTGTATCCAGGAGATCAAGAATATGTAGATTCAGGCTGGAATCTGAACAACCTACCTGTAATAGAAGGATCTGTATTGCGTTTCATCAATGCTGACATTTCTGGGATGACTGTACCTTGGATGTATGTTGGCATGTGCTTTGCAGCATTTTGTTGGCATAATGAAGACCATTGGAGCTACTCCATCAACTATTTGCATTGGGGTGAAGCAAAGACTTGGTATGGAGTACCAGGGAGTGGGGCTGAACAATTGGAGAATGCCATGAAGGCTGCAGCACCTGATCTATTCAAGTCTCAACCAGACCTTCTACATCAGTTGGTCACAATAATGAACCCAAATATACTGATGGCTGCTGGTGTACCAATTTACAGAACTGATCAGCATGCAGGAGAGATTGTGATAACATTTCCAAGAGCCTATCACACTGGTTTCAATCAAGGATACAACTTTGCTGAAGCAGTAAACTTTGCACCACCAGACTGGCTGAAGATAGGCCGTGAATGTATCATACATTACAAGAACCTCAAGCGATTCTGTGTGTTTTCACATGATGAGTTAATCTGTAAAATGGCATTGGAGGGTGACCGGTTAGATTTGGAAACTGCATTGGAAACTCAGAAGGAATTGGTTTTTGCTACAGAAGAGGAAGGTCGGCTAAGAGCACAGATGGCCAAGAAAGGCTTGAAGAATGTACGCAGGACTGCATTTGAGCTTCTCGGTGATGATGAAAGGTTGTGTGAAGCATGCAAAACAACATGTTTCCTATCATCTGTAGCATGTCTTGTGTGTAACCACATGGCTTGTCTCAGACATGCCGAAGATTCCTGCCAGTGTCCTTGGGATAAGAAAACACTGAACTATCGCTATGATATGGACGAGTTGCACATTATGCTCCAGACAATTGATTTTAGAGTCAACAGTTTTGACAAATGGATGACTGAGACGAAAAATATTCTTCTTCCAACAGCTCCAGATATTGGAAGATCACAGAAATTGAAAACACTAGTTGATGAGGCAGAAGAGCTGAAAATACCAAAATGCACCCTACTTGCACAACTGAAAGATGAATACCTAAAGGCAACCGAAAATATTGAACCTATTATTATAGAATTAGATGACGATTGA
Protein Sequence
MDNKNIQKNAMQTSVEFTFTPPPEAPVFEPTVEEFADPLGYIAKIRPVAEKTGICKIKPPARWQPPFSLDVDKLKFVPRIQKLNELEAITRLKLLFLEKILKFWELQGSPLKIPMIENKTLDLFCLKFWVDEEGGFDTCKSPKKWRKIAHEMGYSQCANTMNFLRSNYEKILLPYEIFEKSKADILKTVKKIEPKVDPKEEDETKGLFKEVPIELITTIKSEDSVKEEKPCSNIKKTKTGSDHIKTEAETSKVKVEEEKRSRELRRLATYGPGPKMPGLNDEEFDITKSRKRPRYDMDPLAIYTCAICQKDHRDDLLLICNGCSDTYHTFCLKPPLNIVPEGHWRCPCCISEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFGMSGHLVPTNVAEKEFWRIISSVEENVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVIEGSVLRFINADISGMTVPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEAKTWYGVPGSGAEQLENAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQHAGEIVITFPRAYHTGFNQGYNFAEAVNFAPPDWLKIGRECIIHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELVFATEEEGRLRAQMAKKGLKNVRRTAFELLGDDERLCEACKTTCFLSSVACLVCNHMACLRHAEDSCQCPWDKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTAPDIGRSQKLKTLVDEAEELKIPKCTLLAQLKDEYLKATENIEPIIIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487498;
90% Identity
iTF_00162288;
80% Identity
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