Basic Information

Transcription Factor Domain

TF Family: TF_bZIP
Domain: bZIP domain
PFAM: AnimalTFDB
TF Group: Basic Domians group
Description: bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.76 1.1e+03 0.2 0.0 38 64 30 56 14 57 0.78

2 4 0.35 5.1e+02 1.3 0.0 32 54 52 74 28 85 0.55

3 4 2e-05 0.03 14.9 4.3 26 63 81 118 70 119 0.79

4 4 0.0001 0.15 12.6 2.1 23 54 113 144 109 152 0.59

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.76	1.1e+03	0.2	0.0	38	64	30	56	14	57	0.78
2	4	0.35	5.1e+02	1.3	0.0	32	54	52	74	28	85	0.55
3	4	2e-05	0.03	14.9	4.3	26	63	81	118	70	119	0.79
4	4	0.0001	0.15	12.6	2.1	23	54	113	144	109	152	0.59

Coding Sequence: ATGGACGCAAAAGTAACCAAGATGGATACTCAAGTAATCAAATTGGATACTAAAGTAATCAACCAACACGCAAATGTAACCAAGATGGTTACTAAGGTAACCAAACTGGATACTAGAGTATTCAGCCTGGACGCAAAACTAACCAAGACGGATGCTAAAGTATCCAAGCTGGATACTCCAGTATCCAACCTGTATGCTAAAGTATTCAACCTGGACGCAAAAGTACCCAAGATGGATAATAAAGTAACCAAACTGGAAACTCAAGTATCCAAACTGGAAACTCAAGTATCCAAACTGGAAACTCAAGTATCCAAACTGGAAACTCAAGTATCCAAACTGGAAACTCAAGTATCCAAACTGGAAACTCAAGTATCCAAACTGGAAACTCAAGTATCCAAACTGGATACTAAAGCAACCCTGCTGGATACTCAAGTAAACAAGCCAAACAGTAGAGTAATACAAAATGTCAAACAGAAATAA
Protein Sequence: MDAKVTKMDTQVIKLDTKVINQHANVTKMVTKVTKLDTRVFSLDAKLTKTDAKVSKLDTPVSNLYAKVFNLDAKVPKMDNKVTKLETQVSKLETQVSKLETQVSKLETQVSKLETQVSKLETQVSKLETQVSKLDTKATLLDTQVNKPNSRVIQNVKQK

Sequence clustering based on sequence similarity using MMseqs2