Aleu019643.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- -
- Assembly
- GCA_963942445.1
- Location
- OZ012679.1:134564673-134570575[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.12 16 7.3 4.4 2 23 518 539 517 539 0.97 2 14 0.22 32 6.4 0.4 3 23 547 568 546 568 0.96 3 14 0.0097 1.4 10.6 0.8 1 23 606 628 606 628 0.98 4 14 4.8 6.8e+02 2.2 0.2 5 23 635 653 633 653 0.92 5 14 0.0027 0.39 12.4 1.7 1 23 659 681 659 681 0.98 6 14 0.98 1.4e+02 4.3 3.0 1 23 687 709 687 709 0.92 7 14 0.0096 1.4 10.7 4.3 3 23 791 811 789 811 0.96 8 14 0.00036 0.051 15.2 0.2 1 23 817 839 817 839 0.98 9 14 0.21 29 6.5 3.5 2 23 1079 1102 1078 1102 0.87 10 14 0.0015 0.21 13.2 9.0 1 23 1108 1130 1108 1131 0.96 11 14 1 1.4e+02 4.3 0.2 2 23 1139 1161 1138 1161 0.93 12 14 0.00036 0.051 15.2 4.7 3 23 1231 1252 1230 1252 0.96 13 14 3.6e-05 0.0051 18.3 1.2 2 23 1262 1285 1261 1285 0.94 14 14 8.4e-05 0.012 17.1 2.1 1 23 1289 1311 1289 1311 0.99
Sequence Information
- Coding Sequence
- ATGACTAAAGTGGCAGCACCAGTAGTCAAAATGGTAGAACCACTTTTGGAGTTGATTGATTTTGAAGAAGAgattaaagtagaaaaaatttctaaagatgAGTGTAAAACCCCAGATATTGATGAAgccgaaattttaaaacaaaaacatataaatgcAGACGAAAGGAAAAATGAATTAAACGAAATTGAGgaagaaatcaaaatacaaaccgaagaaattaaaaattgtattcaaatagATGAAGTTAAGAATAATGAAGATATAGAACAAATAGATGAGCTCAATGAAAAATCATcaactgacaaaaatattaaaaaagacaGTTATATGGAAAACacgtcaaatcaaaataattcagatGTTGAAGTTCAATTAGATAGCACTCAAAAAGAGGAACATaatatttcaaacaataaaGTAGAAGCACAACATTTAATACCTGAAATAAATccaaatgataaattaaaagaaaataccCACGAAACAGGAAGATGTTTAGAATTTGACAATGATTTTGAAGTCATAATGGATTCCAAAAATGAGGAATTATCTCtagaaataaaaactgttttaaacaGTACAACCGAACATTCGAACTtggaaaatgaagaaaataatatgaaaaccaGTATTAATTTGATTCGTGCTTCAAaaatttccTCGGATAACCACAAGATTGAAAAAACTGAAGATCAGATCGAAAATGAAAACTCGGAAACAGAAACTAAATTTGCAGATTCAAATGAAAGCACATTGTTAGATCAAGACGAAAACGATAATAAAGTTCAAATTGATTCTGGAGAGCgatttttcatatttgatgACATTATCGAAGAAGAAAATTCAACATggCATAATTGTAGCATTGAACAAGAACCACCTAAATCAAATTCATCTAACTTAATTCCAGTAAATAAATTGATCAATACTGATAGTAAAGCCATTGTTCAAGATAGAAAAGGTGAAATTATAAATGATAACAATTTGATCATTGATTTACAagattcgaaaaataaaattgaaaaagaaataaatcaatGTACAAACGAaaggaatataataaaaaagccagaaaagatacaaaaaattgaagaaatcgTCCAAAAAATAtcgtttgaaaataaattattaaatgtttcgTCGAAAGCAATTTCAGAAGATAATAATTTAGATTCTGTAAAAACTGAACAATTTCACAATTCACAGTCCAATACAATACCTACCGACAGCTCAAACAgtgagaataataaaataaacgaaataattAATGATGGTATTCCAGATATATAcggttataaaaaaattgcttcAGCAATATTTGGCATTTTTGATAAAGATCATGGTGATTCAATTAGtacgaaattagataaaatctTATTGATAGATAAAAAGTATCGAGATatcaaagaaaaagaaagactAGAAATAGAGCAGAAAGAGAAACTTAGATTATTAAATTTGGCTATGGTAATAgactcaaaatcaaaattggaaGGAATGTGtatttcaagcaaaaatatCGACGTGGATAATAAAAATGGTTTATTAACATGCAAATATTGTAATCGTCAATATACTTGCTTAACAAATTTAAGAGAACATTTTCGTGTTCATGTTGGCGAACGAATACTTTTATGCTATACATGCCAACgtggatttttgaaaaaaggTAATCTTGAAGAGCATATAAGCATCTTTCATGTTGGTTCCTCAAAAGGTAAATTTGATTTAGATTCTCTAGGCGACAACCGTAAAGATATAGCAAAGAACACTAACATAACAACCAATAAGaataattctaaagaaaaagGTTATAAATGTCAGTATTGTCCGCGTTTCCTTTCAAATCGTAATATTCTTGAAGATCATTTGCGTTTACACTTTGGAGAAAAACCATTAAAATGCGACCaatctttCGAATCAAACAATAAACGTTCCTATCACGAAAAAATACACGAAAGTGGAACCAAATTTCAATGTAGTTTCTGTAGTAGAGATTTCACAAACCTTTTTACTTTAGAGTTACATGAAAACTCACATAAGCAAAATGGACATTTTAAATGTAGATATTGTGATCACTATTTTgcttcagaaaatacaaaaaaattacatgaagATGTTCATGAGGCTGCCTCTGACTCAAATGAAGActtgAAAATTCAAACTGTAGACATAGCGACTATATTACAAATGAATAATGAACAGGCCCCTATAAATTCAAACGGAAATGCAAATGATTCTAACGGTACTTCAAGTGATGCTACAGATAAATCTTCAAACCAAAatactacttcaaaaaatttaatggtaaagaaaattatgaaaaaatttaaacgtggTAAACGGGATCCTAATTCACCACTCGACTGTCGATAttgtaaaaaacattttgaaagtcCACATCAATTGTCATACCATGAACGTTTACATGAAATTGGGAAgaaatttcaatgtaatttGTGTGATAAAATCTTGGCAACTTCCTATGCTTTGGAATTGCATTTGACATctcatttaaaaaagaaaaaaaagggtatattaaataaaaaatttaatgggtCAACCATATTGGCCAATCAGTTAGCGTTGCACAGGAGAAATCAagaatttaaaccaaaaatagaaattgtttcTGATGTAGCTTTGGCACCTACTCAAACCAtggcaattttaaataatttctttaaacgGGAAATACCGGCTATAACCGTAACAACAACAAGTGAAGatgaaagttttcaaaaaattggtgttgatgatattgaaaaaaatttagcagCTCATGTATTACGTGATACAGATCCATATTATCAATTAATGGCTGATTTTAGTTATCAGTATCAACTATATCAAACAAACTCAGTACCAGCAATAGAAACAGAAAGTGGTAATGCTGGATTCCCAATGTCTCGATATGGCTTCGATGATGTTTTTGATGAACAACAAATAAAACGCCCAAAAAAAGGTAGAAGGAAGAAGATAAATAACGATGAACTTGAgtctataataaaaacaactgaTACAAGcaaatcatatttttacaatcaacaAATCAATTTCGAAATACaaccacaaaataataattttgaaaatgaatttctaGAATCATCGCCAAATATAACACTCCTtacacaacaaaataatttaactccGGCTAAAGATTCTAAtaagaaaaaggaaaagaaaaaaatttcaccgGATATTACTAAAAATGTAACAAGTGTTTACATAAAATGTGAATattgtaataagaaatataatgcTAGCGATAAGAAATTATTGAATCGGCACAGACGTTTACACATAGCTGGAGATACGCATAAATGTAGTTTTTGTAAAAAGTGTTTTGCAACTTTATATTACTTAGATAAGCACTTAAGAGTTCATCATTTAAATCATATAACAGAATTGAAATGTAAATCATGCGATTCAGTTTATGCATTAAAAGAAGCGCTTCGTGGGCATGAAATtcgttttcataaaaaaaataatttgaatgcaatatttaataaaacaaaaattgaaggcaatttaaatgaaaataattataatgaaaatttttctcgACAACATAATACTAAAGAACATTTAGATACACAATATGTAAATGATGGAGAAAGTTTTGCTATTCCAGAAGTACCGAAacctaaaagaaaaacaaaaactaaagatctgaaattaaatcattgtaatTTTTGTGATAAATCATTTTCAACGCAATGTTCTTTAGAAATTCACATTGAACGTACGCATCAAAATTTTgaggaaaattataatattacatgtacatacgaaaattgtaaaaagagatttgaaagtcaaacaaatttagaaaaacatatACGTTTACATGAATCAGATTTTAAATGCTCAATATGCGACAAAAAGACAATATCACAAATATTATTAGATCATCATATGAGAAGTCATGGTATTCCAACATCATTTGCCTGTAAATATTGTAGATCAAAATTTACAATGCAGTTAACTAAAGAtaaacacgaaaaaaaaatgcattctaAAGGTATGtga
- Protein Sequence
- MTKVAAPVVKMVEPLLELIDFEEEIKVEKISKDECKTPDIDEAEILKQKHINADERKNELNEIEEEIKIQTEEIKNCIQIDEVKNNEDIEQIDELNEKSSTDKNIKKDSYMENTSNQNNSDVEVQLDSTQKEEHNISNNKVEAQHLIPEINPNDKLKENTHETGRCLEFDNDFEVIMDSKNEELSLEIKTVLNSTTEHSNLENEENNMKTSINLIRASKISSDNHKIEKTEDQIENENSETETKFADSNESTLLDQDENDNKVQIDSGERFFIFDDIIEEENSTWHNCSIEQEPPKSNSSNLIPVNKLINTDSKAIVQDRKGEIINDNNLIIDLQDSKNKIEKEINQCTNERNIIKKPEKIQKIEEIVQKISFENKLLNVSSKAISEDNNLDSVKTEQFHNSQSNTIPTDSSNSENNKINEIINDGIPDIYGYKKIASAIFGIFDKDHGDSISTKLDKILLIDKKYRDIKEKERLEIEQKEKLRLLNLAMVIDSKSKLEGMCISSKNIDVDNKNGLLTCKYCNRQYTCLTNLREHFRVHVGERILLCYTCQRGFLKKGNLEEHISIFHVGSSKGKFDLDSLGDNRKDIAKNTNITTNKNNSKEKGYKCQYCPRFLSNRNILEDHLRLHFGEKPLKCDQSFESNNKRSYHEKIHESGTKFQCSFCSRDFTNLFTLELHENSHKQNGHFKCRYCDHYFASENTKKLHEDVHEAASDSNEDLKIQTVDIATILQMNNEQAPINSNGNANDSNGTSSDATDKSSNQNTTSKNLMVKKIMKKFKRGKRDPNSPLDCRYCKKHFESPHQLSYHERLHEIGKKFQCNLCDKILATSYALELHLTSHLKKKKKGILNKKFNGSTILANQLALHRRNQEFKPKIEIVSDVALAPTQTMAILNNFFKREIPAITVTTTSEDESFQKIGVDDIEKNLAAHVLRDTDPYYQLMADFSYQYQLYQTNSVPAIETESGNAGFPMSRYGFDDVFDEQQIKRPKKGRRKKINNDELESIIKTTDTSKSYFYNQQINFEIQPQNNNFENEFLESSPNITLLTQQNNLTPAKDSNKKKEKKKISPDITKNVTSVYIKCEYCNKKYNASDKKLLNRHRRLHIAGDTHKCSFCKKCFATLYYLDKHLRVHHLNHITELKCKSCDSVYALKEALRGHEIRFHKKNNLNAIFNKTKIEGNLNENNYNENFSRQHNTKEHLDTQYVNDGESFAIPEVPKPKRKTKTKDLKLNHCNFCDKSFSTQCSLEIHIERTHQNFEENYNITCTYENCKKRFESQTNLEKHIRLHESDFKCSICDKKTISQILLDHHMRSHGIPTSFACKYCRSKFTMQLTKDKHEKKMHSKGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -