Aleu001170.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- -
- Assembly
- GCA_963942445.1
- Location
- OZ012677.1:27864670-27870799[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0033 0.47 12.1 2.6 1 23 1366 1389 1366 1389 0.97 2 12 5 7e+02 2.1 2.3 1 23 1540 1562 1540 1562 0.93 3 12 0.0025 0.35 12.5 3.1 2 23 1565 1586 1565 1586 0.97 4 12 0.00016 0.023 16.2 0.3 3 23 1594 1614 1592 1614 0.98 5 12 1.5e-05 0.0021 19.5 2.8 2 23 1621 1643 1620 1643 0.95 6 12 4.1 5.8e+02 2.4 0.1 5 23 1656 1674 1654 1674 0.96 7 12 0.088 12 7.6 0.1 2 23 1713 1733 1712 1733 0.96 8 12 6.2e-05 0.0088 17.6 0.7 1 19 1739 1757 1739 1761 0.95 9 12 9.8e-05 0.014 16.9 1.5 1 23 1769 1791 1769 1791 0.98 10 12 0.00017 0.024 16.2 7.4 1 23 1797 1819 1797 1820 0.96 11 12 0.002 0.29 12.8 4.5 1 23 1825 1847 1825 1847 0.98 12 12 0.014 2 10.1 5.6 1 23 1853 1875 1853 1876 0.93
Sequence Information
- Coding Sequence
- ATGTTGGACTTGGTTGCATGTCCTGTGTGTACGCTCTACCTGCATAAAGGTATGAGCTTAGCAGAACATTTGGAAACTCATCCAAAAGAGCAAGTAATAAAAGCATTGGTATCGTTGGCAACAGGATCATTATTGCCTACTGATACGGTACCGGatactaataatattagtaaaacaTCAACACCTGCGGCATCAACAGCTATATCTTCAGGGTTATATGAAAATCTTCAATCTTCTAATATAGTTTTGCATAGTGGTAGTAATTTACAAACTCGTTCAACTGGTGTTGGTAATAATACGCGTCCCACATCTACATTAAACACATTTAGTACGAATTCCAACTCTAGCTCTAATTTTTCAACAACACCCGTTCTTGCAACTTCTTTTGGTGATCCTCTAACTAAtcgaaaacaacaacaacaacaacagagcGCATCtaccttaaatttaaaatcgaattCAGAATTTAATGTGGGATCAAGTGGAAATCCAATAAATGaacaatatgtattatatacaaataataatacaggaaaccaaaataattcaatgaatTTCCCTCCTCATTTACAAcatttgtttaatagtaaaacaaaacaactccCGCCACCTCCAGCATATGGTCAAGCAATAAGCCAATTAAGATCtcagaatagtataaattttgcacgtacaaatacaacaaaatcatTAGCAAACTTATCATtgagtaataataacaataataacattaataagaataatgataatcatagtattaataataagaataataaaaataacgcaaatttaaataactgtCAAATATCAAGCAATGCATCTACTTCGTATTCAATAGTCAATCAACAGACTACAAATTACTATACCAATGATAATAACTGTCAAGAAACGCTAGATTTTTCATTACCAAAGCAACATCACCAAACAACCGGAATGAGTCACTCTTCAATTTTACCTGCTCCTCCATATATGTCACCGTCAGATTTAAGATGTTCTCAAAGCAATGGCACATCTATTAATAAACACCAATGTTTTGAATTTCCAACACATTCTGAACACTCAAATTATCAGTCTACATCTAATTATGACAATGGAAGATTTtcaagtaataattttaataacgaaATTAATACTTCAAGAACACCTTCTccaatttgtttaataacatCAATTCGATCAGCTGATACTAATATAAAAGAACATTCAGTTAACAAATCTCAAACGCAGTCTTCATCAGTTTTACGTTTTGCCGATACACCACCTGCTGCGCAATATATTGAAAGAGATTCAGGAGATTTTTTAGTGCAAGAATCACCTCGTCATATTGTAGAATGTATCGAAAAAGATGATGGAGAATTTTCTGTAATTGAAAAAGTAATTCGATCGCCGCCAAGTATAATTTCAGTAAATGAACATATATTAGACGAAAATGCTCAACTCAGTAATAATGAATTTGAAACTAATAGTGATTTAGAGGAGGAAATTATTCAGGAAGAGAAATATAactctgaaaataaaaatgatgatattgaagagaaatatatacataatgataAGCTACCAGAAAATCagattaaaatagaaaattccgACAATTTGTTCGAATATGAAGAGTCAAGTTTAACTACAAATTATGCATCATTTAGagttgatgaaaatcaaaaaagcaAAAGCACATCTTCAAAACGAAAACTTAATTCTAAAGGTGTTAAAGTTTTAAGTAATGTTAAATTAGATCCGAACAAATCACTGGAAATTGTTGGAAATATACAAAAGTGCAGTACAGCAGAATTCTGGACTGGGGTCgtgaatacaattaaaaatgaagatGGTGATAAGTCATATAATTCGAACTCTGTGCCCTCTACAAGTGCCAGTAGTGAAATAGAAGACATAGAGGAACAAAGTACCTTAAATGATAAATCAATTTCAACTTCATCAAAAGTTTCAGTTCAAGATGATGTAACTAAAATGATTACAACAAGTGTTATACGATTGGCAATTAATCAGAAACAATCCGAaacaatttctaataaaaaattcaaaaacaataaagatCTAACTGTCAaggaaattaattcaaatttacaatcGGTTTCTTATGACAAAAATGAACCTGTAGCATCATCGTCTAATAACATTCGAACTCCAAATACAGGTGGTAAGAAAACTGTTTACAAAAAACACCCCAAAAAATTggtagttaaatttaaaaaccctCTACCTCCAACGGTAAATCCAACTATTTCtacagtaaaagaaaataattcgaATGAAGTTATAGATATAACCGATAACGAATCTAATGAAATTGATATTCAAAAGCCGGGGTcatcatcaatatttatttcatcCACAAGTAAaggattaaaacaaaaacctatAGAAGATACAGatgaaaatactttaaataatatgatgGAGCAAATAGTTAATGAAGAAGACACTTCTTTTAATGAGACTACTCCACATCAAATAAGCAATATAACAGAAGGAAATATagcacaaaatttaaatttaaaaattgaaaaagagaGTGGTATCAATGCAAATGATATACAAACAAAGCTTAATATACCGATTTCCTCAACTTCTATTCAATTATCATCATCGTCGTCgtcctcatcatcatcatcatcatcatcatcatcttcggTGTCATATTCTTCATCGtcttcttcatcatcatcatcatcactttCATCAATTCCAATTAATCAGGACATACAAAATTCAAGCaactcaaaaattttacaggataaTGAATTTAGCgatgaaagtaaaaattttataacaattaaaacaaataatgccaGTATTGAAAGTGATTTTAACAATACTgatgaaaaaaaagataatgaattattttctaCTGAAAATTTTACGAAAACAGTATTTATTATTGAAGAAATAGATGATGGGAGGCAATGTGAAACAAAAGTGTCGTTTGAACCAAATAATCAACTAACTAATAACTACAACAATTTTTCAACAATCAATTGTGCATTTTCAGCAAGTGAGCCAATTGCGGCAACATCTGCTTCTGAAACTTTAACATCGAACAATGTGACAGATAAACAGTCACATCAGCATCAAGAACAACCAGAATTAGTTattgatattcaaaataatcataataacacTCAACAGAACACATATTGTGATTATCcatttagttttttgtattcGTCAGGATCAGCTATAATACCTAACTCAGCAAATGGTACTTTTACACAAGgtGCAACTAGTAATCAAAATAGTAGCAATAGTGagcatgaaattattttcaattcaaatagtTCAAGCAATAGTAATTTTGTCGAAAAAACAACTAATTCGGTTGCATCAACATCAACAACTATTTCATCCGCAGTTTCAATGTATTCAAAAAGTAAAGGTAATGATGATAATGCGACAAATGGtggaattcaaatatttagcCGCTATGTTGGTCCTGCTACATTTACTTCACGCGAGGATGGTGATCTAGAGGATAAGAATTGCTATCTAGATTTGGATTTGTGTActaaacatataataaataataataataatgaagaaaataatgcTTGTAGTAGCAACAtagcaaataaaattatgagTATTAATGCTGTTAGTACTCATAATAGCAGAGAAAACTTAGTGTcagaattaaatataagaacCGACGAGCAAATGCCTGCCAAAGGTGAAATATCTGAACAAGAAAGTAACGGAGATATTGAAAATTCTTGGAGTCAACCCatatATAATGAACTTTCTTACAAATACTCTAATCCTTATGATGTTAGTCATGAAAGTTGGAGTTTAAGTCATGACGATTTCTTTAATCCACATGATTTAAACAATGTACGCTCTAAAATaacGTCGGATCCTGATATGGAGAATgatataaaaccaaatttacCTGGAACTTCAACAGAATGTGCTGCGGAACCTACAATACAACCCAAAAAGactaaaaaacgtaaaaaagcTCCAGCTTTATTTTCTGATAGCACTACAGTTTTGGAAACGGTAAATCTAAGTAGTAATACTGCGGGTTCATCATCAAATGCTCAAATTAATTCTGTTATAAGTACTAAAAAGAAAGCTTATCAATGTGATCATTGTTCAGTGGTATTTGTTCGATTGAAAGATAGAAATCATCATATGGTTACTATTCATCAGTATAAAAGAGTCAATCGCCGTTTAATACGTGAAGCACCTTCTTCTACTGTTACATCAGCTACAATTAATAATTCTGAAAATCAAGAAGACGACCAAGATCTAAATGTTATTGGACATATAAAACCAGATATAAGTTCTCCGGATGATTTGGCTATATCATCgcaatttataaaaactgaaaatgaatATCCAGAAGCTTTACAATTAGTAACAGAAAACGCAAATGTTACTACTAATAGAACTGatgaaattgtaataaatgaagATGATAAGAAACCAAATTTAAAGGTTGTTTCTAAGAAAACCACTATATCTACTCAATACCCTCGCACTAAATACGATACAGTACGGGCAAATGTTTATCgtttattaatgaatttcaatttaggtgttcttaaacaaaatactaatgtagaaattgatcaaaatctttacaattccaaatcattttgttgtatggtttgtaaacaattttttattagcgTTAAACTTTTTGATGAACATTTGTCAGAACATCCAGCTGAATGTTTCACATGTAGTAAAAAGTTTTCACGATGGACATATTTTTCACTTCATTTAAAACGTCATTTAGGTTGGAAGGATTTTGGTTGTactgtttgtaaaaaaaagtttgtaatAAGAAGTGCATTAATTGAACATATGCGCATACATACTGGACTTAACCCTTTAAATTGCAATTTGTGTAGTAAATCCTTTAaaagatattcaaatttaacaCAGCATAAAAGGGTATTTCATGCCAAAAGAAATAAACGTAAAAAGGATTATGTTTGCTATTGTGGTGAAGTTTTACCAACAAAAGCTCGTTTTGTTTGGCATAAAGAAACACATGATCCAAAACCTAAATGTTGTCCATGGTGTTGTGATCGTTTCATTCATGTTAATAGTTTAAGTCGTCATATTCGACTAGCTCATGCTGATAAATTTGCATATAATGAACCAGTTGAATGtccaatttgtaataatatatacgCAAAAACTAGTCTCAAAAGTCATATGGCTACACATACAATGGAAACTTCACATGAATGTGCTATTTGTAATAAATCATTTAGCAcaaaatggaatttaaaaatacatagttGGGTACATGCTAATCGTACAGCAAAACCATTCAAATGTGAACATTGTACGAAAGCATTTGTACGTGAAATCgattataaaaatcatataaatgCACATAAACAAATTCGACCCTACACTTGTGAATATTGTGGatgtaaatttataagaaaatataattatttaagacATCGACGTGAACATCatggacaaaaaaaattcagttgtgATTTATGTGGTAAACTATTTCATcgacattattatttaattgaacatCGTCGTATACATACCGGTGAAAGACCATTTTTATGTACTATTTGTGGAAAAagttcaacaacaaaaacaaatcataataaacatttaaaaatacatcattCTCGTGATCCATTTACCTCTgaagcttaa
- Protein Sequence
- MLDLVACPVCTLYLHKGMSLAEHLETHPKEQVIKALVSLATGSLLPTDTVPDTNNISKTSTPAASTAISSGLYENLQSSNIVLHSGSNLQTRSTGVGNNTRPTSTLNTFSTNSNSSSNFSTTPVLATSFGDPLTNRKQQQQQQSASTLNLKSNSEFNVGSSGNPINEQYVLYTNNNTGNQNNSMNFPPHLQHLFNSKTKQLPPPPAYGQAISQLRSQNSINFARTNTTKSLANLSLSNNNNNNINKNNDNHSINNKNNKNNANLNNCQISSNASTSYSIVNQQTTNYYTNDNNCQETLDFSLPKQHHQTTGMSHSSILPAPPYMSPSDLRCSQSNGTSINKHQCFEFPTHSEHSNYQSTSNYDNGRFSSNNFNNEINTSRTPSPICLITSIRSADTNIKEHSVNKSQTQSSSVLRFADTPPAAQYIERDSGDFLVQESPRHIVECIEKDDGEFSVIEKVIRSPPSIISVNEHILDENAQLSNNEFETNSDLEEEIIQEEKYNSENKNDDIEEKYIHNDKLPENQIKIENSDNLFEYEESSLTTNYASFRVDENQKSKSTSSKRKLNSKGVKVLSNVKLDPNKSLEIVGNIQKCSTAEFWTGVVNTIKNEDGDKSYNSNSVPSTSASSEIEDIEEQSTLNDKSISTSSKVSVQDDVTKMITTSVIRLAINQKQSETISNKKFKNNKDLTVKEINSNLQSVSYDKNEPVASSSNNIRTPNTGGKKTVYKKHPKKLVVKFKNPLPPTVNPTISTVKENNSNEVIDITDNESNEIDIQKPGSSSIFISSTSKGLKQKPIEDTDENTLNNMMEQIVNEEDTSFNETTPHQISNITEGNIAQNLNLKIEKESGINANDIQTKLNIPISSTSIQLSSSSSSSSSSSSSSSSSVSYSSSSSSSSSSSLSSIPINQDIQNSSNSKILQDNEFSDESKNFITIKTNNASIESDFNNTDEKKDNELFSTENFTKTVFIIEEIDDGRQCETKVSFEPNNQLTNNYNNFSTINCAFSASEPIAATSASETLTSNNVTDKQSHQHQEQPELVIDIQNNHNNTQQNTYCDYPFSFLYSSGSAIIPNSANGTFTQGATSNQNSSNSEHEIIFNSNSSSNSNFVEKTTNSVASTSTTISSAVSMYSKSKGNDDNATNGGIQIFSRYVGPATFTSREDGDLEDKNCYLDLDLCTKHIINNNNNEENNACSSNIANKIMSINAVSTHNSRENLVSELNIRTDEQMPAKGEISEQESNGDIENSWSQPIYNELSYKYSNPYDVSHESWSLSHDDFFNPHDLNNVRSKITSDPDMENDIKPNLPGTSTECAAEPTIQPKKTKKRKKAPALFSDSTTVLETVNLSSNTAGSSSNAQINSVISTKKKAYQCDHCSVVFVRLKDRNHHMVTIHQYKRVNRRLIREAPSSTVTSATINNSENQEDDQDLNVIGHIKPDISSPDDLAISSQFIKTENEYPEALQLVTENANVTTNRTDEIVINEDDKKPNLKVVSKKTTISTQYPRTKYDTVRANVYRLLMNFNLGVLKQNTNVEIDQNLYNSKSFCCMVCKQFFISVKLFDEHLSEHPAECFTCSKKFSRWTYFSLHLKRHLGWKDFGCTVCKKKFVIRSALIEHMRIHTGLNPLNCNLCSKSFKRYSNLTQHKRVFHAKRNKRKKDYVCYCGEVLPTKARFVWHKETHDPKPKCCPWCCDRFIHVNSLSRHIRLAHADKFAYNEPVECPICNNIYAKTSLKSHMATHTMETSHECAICNKSFSTKWNLKIHSWVHANRTAKPFKCEHCTKAFVREIDYKNHINAHKQIRPYTCEYCGCKFIRKYNYLRHRREHHGQKKFSCDLCGKLFHRHYYLIEHRRIHTGERPFLCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -