Aleu007783.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyra leucocephala
Gene Symbol
RREB1
Assembly
GCA_963942445.1
Location
OZ012678.1:3922663-3930163[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.00021 0.03 15.9 0.1 1 23 453 475 453 475 0.99
2 14 0.00028 0.04 15.5 0.2 1 23 485 507 485 507 0.98
3 14 3.2e-05 0.0046 18.5 7.5 1 23 513 535 513 535 0.98
4 14 0.049 7 8.4 3.8 2 20 814 832 814 833 0.95
5 14 0.31 44 5.9 0.6 1 21 888 908 888 909 0.95
6 14 0.012 1.7 10.3 0.1 1 23 1191 1213 1191 1213 0.97
7 14 0.0016 0.22 13.1 1.5 1 23 1223 1245 1223 1245 0.99
8 14 0.00079 0.11 14.1 2.1 1 23 1251 1274 1251 1274 0.97
9 14 0.0038 0.54 11.9 2.4 1 23 1654 1677 1654 1677 0.97
10 14 8.3e-05 0.012 17.2 0.1 2 23 1999 2020 1998 2020 0.97
11 14 0.2 28 6.5 6.3 1 23 2026 2049 2026 2049 0.96
12 14 5.5 7.8e+02 2.0 6.0 1 23 2166 2189 2166 2189 0.93
13 14 0.012 1.6 10.4 0.5 3 23 2241 2261 2239 2261 0.96
14 14 0.0024 0.34 12.5 5.6 1 23 2267 2289 2267 2289 0.99

Sequence Information

Coding Sequence
atggaaacatcaacaacaacagaaTCAAAAGCCGTCATAGCACCAATAACAGCAgtaacaacaatattaaaaaattcactaGAATTATCACCACCATCATCTGCAtctatattaagaaaaaattcaataaaaggtGAAAGAAGATCATCATCAACATCTGAATCATCTGTCGAACCAATGGATTTGGGACGTACACcaacaccaccaccaccaccaccaccaccatcaacattaattacaaaattttctcataaaaaattatataaaaataaattacaaaataatgataatgaaaataaaattaaagatgatACAACAACTCAATTACAAAGTACACCAATTCGACGTAATAGATCATATTCTAATAATGATTCTGAAGAACCCGAAGAATATGATTCAAATGACAATGACGATAATGATGATattaataatgatgaaaaaagttataaaccaaaaaatagtgataccaaaaaattaaaatataataataataataatcgttataataaaaataacaataataataataataataatttaaataataataatcgttATAATCATCATCTTTATCGTAATAATCATACAGTAGTTGAAATCGAATCAAGTGATAATCCGAAttcattaagaaaaaaatttcgtattaGTACACCAaatcgaaataataataataataacaataatgtaaatttagataataataaatattgtgcAAATAAgaatgatattgatgatgataatggtgatgaaaatgatgaacaTAATAACAACGAAAATGATAATAAACGAAAATCAAAAACGAattctttatataataataataacaataataataataataataataataataataataataataataataataataataataataacaataactataacaataataataacaatgataacaatgaaaatgataatttaatgataaaaaaccATTCAATAACACCATTAACACCAGCATCTTCAACATCATCTTCAAGACGTGGTagtgataatgataatgacaatgatgatgatcgTATTTGTGATGGTAGTAATGGATTAGTTGACGATGGTGGTCGTAGTTTAGATCAAAATAGTGGTGATGATGAAGATATCGAACAAAATCgaacaaatcaaaatgaatCAGGTTTTGTTGATGGTAGTAgccataatttattaaattcaattaattcaatatctAGTCCAGAATCTGGTGGCGGGGGTGGTGGTGATAATGGGAATGGAGGTAATATTACCATTAATGGTAATAGAAATAATTCATgcggtattaataataatgaacgtggtagtggtggtggtggtggtgaaAACACCAGTGGTAATGAAGATATTAAATATGTTTGCCCAATATGTGAAGTTGTATCAGCAACACCACATGAATTTACAAATCATATTAGATCACATAATTATACTTCTGGTGATACAGAAAATTTTACTTGTCGTATTTGCAAAAAGgtgtTATCATCTGCTTCATCATTAGATCGTCATGTACTTGTTCATACAGGTGAACGTCCATTTAACTGTAAATATTGTCATTTAACATTCACAACAAATGGTAATATGCATCGACATATGAGAACTCATAAACAACATCCACATCAAAAACGAcgtagtagtaataataatacaataaaaaataataataaagacaacaacaatgtaaaaacaaataatagtagtaatggtaataataattataatagtaacaataacagtaataataacgtaaattcaaatttaattaataatttaaatgcaaataataattcaaatacattaaatactggtaatattaataataataacaacaacaatacattTTTACCACAATTGAATAGTGctaatacaaatattacaacAATGCAAAATGGTAATATTATTGGTGATGGTGGCGAAAGTTATGAAAGTGAAGATGGTGGTTGCTCAACAGATTCAAGTGCCAGCAATAATAGCTCAAATTgtagaacaaataatattagaaataataacggtattaatataaataataatttaattaatcaaaatgcaATACAtacaacaattaataataataataataacaataataataattataataataacaataacaataataataactattataaacgTAAAAGTACCGATGATGACATTAATGGAATAATAAAAAGACGTatgaaactaattaataataatataataattaatgaaagtgaatcattaaatgattttataacaacatcatcaacaacagcaacaacaaatacaaatgtAACAACATCattaaatacagaaaataaagagaaacaagaaatattagaaatacaacaacaattacatcaaaaattttgttgcccTGTTTGTAATCGTAATGATTTCATTAGTATGCTAACATTGAGTACTCATATGGATCGTGAGCATTCTGATATACCAGCAAAATGTCGTCAATGTGATGTTGTTTTTAAAACTCATAAACAATTAAATGCTCATCGATgttgtttaataaaacaacaacaaccacaacagcaacaacaaccgATTAATATAATGCAAGGTTTCAAGGATTTAACATTTGTTGATTTTAGTAgtgaaaaatttccattaattgCAAAATCATTATGTGAACAGAATATTCGTCAATCAATTgccaattcaaaatttcaatgtacaaaatgttatttacCATTTTCATGTGCTGATTCACTTGAAATTCATTTACAAGATTGTAATGTTgttgaaaagaaattaaaaccaGTACCACAATTAATTAATCGACAAGCATTGATACTATCAAATATGTTAATGCAACATCCATCTGTTGGAGGTGAATTACCAAAAGATTTTTCAATGCGAAAAGTGCTTAATATTCAACAACGaaagcaacaacaacaccaacaaaaaACAACCGATAAAAtatctgaacaagaaaaattaactgttaatgataatgaaaatgttgATCAATTACTATCCAATCAATTAAAACGTAGTTTAAGCAGTGAAAGCTTAAATTCTATAAAAGATAGAGACGACAACAttgatacaaataataaaaatactaaagaTGAAATTGATCGTAATCGTGATGAATTTTTTGCtcatttagatttaaaaaataaatcaatgatGAGTTTTAACAAtcatatatcaaataataataataataataacaataacaataataatatttcaattgataGTAATATTAAAGAAACTTCAGAAAAAATATTAGACTTTAAATCATCAGATCTCAATCGAACTAATACTTCATCACCaacattagaattaaataaatctaattcaaTAACATCAAAAGAAATTGAGAATGATCAGAAAAGAGAAAAACGtgaacaaaaattacaacaacaattacaacaaaatgATTCAAGAGATTTAGCTGATATACAATCTATTTTGAATGTTACTGCTTCTTCAAGTAATTTTTTGCGTAATTTTGAGATTAATGTTAATACACCAATGGGTAGTGAATGTGGTTATGGCAAAGATGAAGAAGAGGCTCAGGATTCATTTACAGCTGAATTTCGTAAAATGAAACTTCGTGGTGAATTTCCATGTAAACTTTGTACAGCTGTTTTTCCAAATCTGCGAGCTCTCAAAGGTCATAATCGTATACATATTAGTGCTGCTGGTAATGCTGGACCATTTCGTTGTAATATGTGCTTATATTCGATACACGATAAGGGAGCCTTAGTACGCCATATGCGAACACATAACGGAGATCGACCATATGAATGTGGTGTATGCAATTATGCATTTACAACAAAAGCAAATTGTGAACGACATCTACGTAACAGACATGCTAAAACAACACGTGAAGAAGTAAAACGTGCCATTATTTATCATCCTTCAGAAGATTCATCATGCGATGATCCAaccaaaaaattacatttgttttCATCACCTGAATTCGATAACGATGATGAATTACAAATAAATCCAAAAGATCGTTCAACACCAGTTTCtcatttaaaagaaatactTCAATCTGAAACTACACCAAAAGCATCTGTTAAAATACAAGTTAAAAGTTTAGAAAAACTTCttgataaaaatcaatcaacAGTTTCATCAACTTCAATTTTACCTTCAAgcaattttcattcaaatttgtCAAGATACGAAAGTGATCCACAAATATCGAATTCTAGTGAAAAACAACATTTAGATTTAGAAGATTCAGTTGATTCTCATCATACTGATTCAGCACGTGCAATTGATCTTAGCATGGATGTTttagatttaagtaaaaaatctaaaccagtaattgaagaaaattcaaTTCCTCCAAATCATGAAGTTCAGGGAGAtgcattaaaattagatttttcacAACAGTTGTTACTTGCTCAACAACAATTCTTTGCTGATGCTTTACCAAAAATTGATCCGAACAACTATTTTCAACTTTGCAGAAATTTAGCTTTACCTTTAACATTTAAtccatttttaacttttaatccTTTAATTTCTAATGGTCTGGTTGACTTTAGTAAATTTGCTCCTTTTATGAATTCAGCAGCACTTTATGGTAATGCAACTAATCAAATACCTGGAATAACAGTTCCTTCTGTATCAAGTACAAATTCAAATGATTTAAGCAATGTCCAAACTCAACCAATTTCACAAGATCCATCacagaatattgaaaaaattacaactgAGATTCCTTTGAAAAATGTTACCACTGCAAATTCGTCAAATGTTCaacctttacaaaaaaatctaaagaatTCTTCAGTAAATTCAACaggaaatcaaattaatttatccGGAACACCAAATTTACAACAAACTCAACGTTTACCAGTTCAACAACAGCTTCAAACGACCACATTAAATCAATCAGTTAACAATAATGGACCTGttaaaatggtaataaaaaatGGTGTTCTTATGCCAAAGCAGAAACAACGTCGCTATCGTACAGAACGTCCATTTACTTGTGAAGTTTGTTCGGCTTGTTTCACTCTTCGTTCCAATATGGATCGTCACATTAAGCAACAACATCCAGAGATTTGGGCAAAAAAACAGCGTTCTGGTCAACACGTTATGCGAGGACGTGGTAGCAGCTCAAATGTTATGTCACATATGCAATCATCTCATTTAAGAACTCAAATGCCAAGTTCATTATCATCGAATCCCTTTAGTACTATATCAAAAGAAGTAAAATACGCTCTTCTTGCTCAGAAGCTTCAACCACGCAAAGACACTGATATTTTACAACAAGCATTAACACAAGGATCAAGTAATGCTtcttacaataacaataactcTACttctaacaatattaataatagtggTAGTGTTgaagatgatgataatgatcCGAAATTAATAATTGATGAAGATGAAGATCTTGAAGTAATAGATGATCAAGAAGATCTTGAAGATGAGGATGAAGAAAATGAAACATTTAATGCCGAAGATGATCAACCTGATCAAGAAACTGATATGAAAAGTAAAGATATTTGCCAGCAACAGGAGGAAAATGAACGTACACGACCTGAAAATATTATTGGTGCTAAAAAAGTCGCCGAAACAATTTTAGAACAAGCTATTAAAACCGGttgtaaaacaattaataatcaACCAACTAATGCTAATTCAAATGAACAAAATCTCAAAATTGCCAATAACTTGATTGCTCGTGCCGAATCTGTTGGAAAATATCTAAAAGAAGTTGCCAGTTCTTCATTCAAATCAGATGAATCGACTGATTTGGTATCAGTTTCAAAACTAGTTGATAATGCAACAAATAATGCCATgtcatttaataattactttaaacCATCAACTGACATTAACGAGTCAACAAATAATGTCAATCATATGGAACAAAGTGATGAAGAAGGTTTGGTAGCATCGGGTAGCGCATCAGATAATAATTCTGGAGCTGAAGAATCAGCTATTAATGTTGTTCCTGgtcaacaaaagaaaaaatctgCTTATAGTTTAGCTCCGAACCGTGTACCATGTCCTTATTGTGATCGTATATTCCCATGGTCAAGTTCATTAAGACGTCATATATTAACTCATACTGGTCAAAAACCATTTAAATGTTCACATTGCCCACTTCTATTCACAACAAAAAGTAATTGTGATCGTCATTTATTACGTAAACATGGTAATGTTGAATCAGCAGTTTCACTTTATGTTCCCATTGATGATATTCCAGATCCAGTTCCAATGCCAAAAGCTGTAGCAGAAGCTTTTCAAGCAGCAAAAGCAGCAGCAGCTTCAATTGCAgcatcaaataataattcatctACTCAATTACCAATATCACCACAGCAACAccatcaacatcaacaacatcaactacaattacaattaaataaaaattcaataattgaagaaaatcaGGAATCAGTAAAAGTTTTACAACCAAATTCAGCACAAAAttcattacaacaacaacaacaaaaatcagaacaacaaacaattttacaaatatcatcAACAGATTTACCATTCAAATGTCATTTGTGTGATAGCTCATTTAGTGAACGTATACACTGTTTagatcatattaaattaaatcatatacaagaatttgcattattattacaaaaaggTGCTATTGATACAGAAGTAGATTTAAATTGTAATCAAATTCAACAGTCAACAACTGAAGAAGATGATAAACGTGATGATGGTCGTGGAAAATATCCAGATTATGCTAATCGTAAAGTTATTTGTGCATTTTGTGTTCGACGATTTTGGTCAACTGAAGATCTGAGACGTCATATGCGTACACATTCAGGTGAACGACCATTTCAATGTGAAGTCTGTTTTAGAAAATTCACTCTTAAACATAGTATGTTACGACATATGAAAAAACATAATGGTGGAAATCATAATAATCAATTGACAACACAAAATAGCGGTTCAGATTGTTCAGATGATGATCAACCTACAACAAGTATGATATTATCAAATTCATtaagaaatcataaaattaatgaacttttaaataaagttgGCCACAATGGTAGTGAATGGCAAAATAATCCTattcataatcatcatcattctcatcatcatcatgcaTTCAAATCTGaagataataatgaaattattaattcaactACATATGTATCAAATGCTAATAACACAAATACAAATTCTGATTTAATTGGAAATTTACTTGGAATTAGTGATcaaagtttattgaataaatttttaacaaatccTAGTGAAGCGGCAAAATTTTTTggtgttgaaaaataa
Protein Sequence
METSTTTESKAVIAPITAVTTILKNSLELSPPSSASILRKNSIKGERRSSSTSESSVEPMDLGRTPTPPPPPPPPSTLITKFSHKKLYKNKLQNNDNENKIKDDTTTQLQSTPIRRNRSYSNNDSEEPEEYDSNDNDDNDDINNDEKSYKPKNSDTKKLKYNNNNNRYNKNNNNNNNNNLNNNNRYNHHLYRNNHTVVEIESSDNPNSLRKKFRISTPNRNNNNNNNNVNLDNNKYCANKNDIDDDNGDENDEHNNNENDNKRKSKTNSLYNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNDNNENDNLMIKNHSITPLTPASSTSSSRRGSDNDNDNDDDRICDGSNGLVDDGGRSLDQNSGDDEDIEQNRTNQNESGFVDGSSHNLLNSINSISSPESGGGGGGDNGNGGNITINGNRNNSCGINNNERGSGGGGGENTSGNEDIKYVCPICEVVSATPHEFTNHIRSHNYTSGDTENFTCRICKKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHPHQKRRSSNNNTIKNNNKDNNNVKTNNSSNGNNNYNSNNNSNNNVNSNLINNLNANNNSNTLNTGNINNNNNNNTFLPQLNSANTNITTMQNGNIIGDGGESYESEDGGCSTDSSASNNSSNCRTNNIRNNNGININNNLINQNAIHTTINNNNNNNNNNYNNNNNNNNNYYKRKSTDDDINGIIKRRMKLINNNIIINESESLNDFITTSSTTATTNTNVTTSLNTENKEKQEILEIQQQLHQKFCCPVCNRNDFISMLTLSTHMDREHSDIPAKCRQCDVVFKTHKQLNAHRCCLIKQQQPQQQQQPINIMQGFKDLTFVDFSSEKFPLIAKSLCEQNIRQSIANSKFQCTKCYLPFSCADSLEIHLQDCNVVEKKLKPVPQLINRQALILSNMLMQHPSVGGELPKDFSMRKVLNIQQRKQQQHQQKTTDKISEQEKLTVNDNENVDQLLSNQLKRSLSSESLNSIKDRDDNIDTNNKNTKDEIDRNRDEFFAHLDLKNKSMMSFNNHISNNNNNNNNNNNNISIDSNIKETSEKILDFKSSDLNRTNTSSPTLELNKSNSITSKEIENDQKREKREQKLQQQLQQNDSRDLADIQSILNVTASSSNFLRNFEINVNTPMGSECGYGKDEEEAQDSFTAEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHISAAGNAGPFRCNMCLYSIHDKGALVRHMRTHNGDRPYECGVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDPTKKLHLFSSPEFDNDDELQINPKDRSTPVSHLKEILQSETTPKASVKIQVKSLEKLLDKNQSTVSSTSILPSSNFHSNLSRYESDPQISNSSEKQHLDLEDSVDSHHTDSARAIDLSMDVLDLSKKSKPVIEENSIPPNHEVQGDALKLDFSQQLLLAQQQFFADALPKIDPNNYFQLCRNLALPLTFNPFLTFNPLISNGLVDFSKFAPFMNSAALYGNATNQIPGITVPSVSSTNSNDLSNVQTQPISQDPSQNIEKITTEIPLKNVTTANSSNVQPLQKNLKNSSVNSTGNQINLSGTPNLQQTQRLPVQQQLQTTTLNQSVNNNGPVKMVIKNGVLMPKQKQRRYRTERPFTCEVCSACFTLRSNMDRHIKQQHPEIWAKKQRSGQHVMRGRGSSSNVMSHMQSSHLRTQMPSSLSSNPFSTISKEVKYALLAQKLQPRKDTDILQQALTQGSSNASYNNNNSTSNNINNSGSVEDDDNDPKLIIDEDEDLEVIDDQEDLEDEDEENETFNAEDDQPDQETDMKSKDICQQQEENERTRPENIIGAKKVAETILEQAIKTGCKTINNQPTNANSNEQNLKIANNLIARAESVGKYLKEVASSSFKSDESTDLVSVSKLVDNATNNAMSFNNYFKPSTDINESTNNVNHMEQSDEEGLVASGSASDNNSGAEESAINVVPGQQKKKSAYSLAPNRVPCPYCDRIFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIDDIPDPVPMPKAVAEAFQAAKAAAASIAASNNNSSTQLPISPQQHHQHQQHQLQLQLNKNSIIEENQESVKVLQPNSAQNSLQQQQQKSEQQTILQISSTDLPFKCHLCDSSFSERIHCLDHIKLNHIQEFALLLQKGAIDTEVDLNCNQIQQSTTEEDDKRDDGRGKYPDYANRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEVCFRKFTLKHSMLRHMKKHNGGNHNNQLTTQNSGSDCSDDDQPTTSMILSNSLRNHKINELLNKVGHNGSEWQNNPIHNHHHSHHHHAFKSEDNNEIINSTTYVSNANNTNTNSDLIGNLLGISDQSLLNKFLTNPSEAAKFFGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-