Basic Information

Insect: Argyra leucocephala
Gene Symbol: -
Assembly: GCA_963942445.1
Location: OZ012680.1:38721404-38726170[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.059 8.3 8.2 0.2 1 23 300 322 300 322 0.96

2 7 0.049 7 8.4 2.2 1 19 932 950 932 954 0.94

3 7 8.9e-06 0.0013 20.2 0.4 1 23 960 982 960 982 0.98

4 7 3e-06 0.00042 21.7 0.2 1 23 988 1011 988 1011 0.96

5 7 5.3e-07 7.5e-05 24.1 0.6 1 23 1017 1039 1017 1039 0.99

6 7 6e-06 0.00085 20.8 2.0 1 23 1045 1067 1045 1067 0.99

7 7 8.8e-06 0.0013 20.2 3.2 1 23 1073 1095 1073 1095 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.059	8.3	8.2	0.2	1	23	300	322	300	322	0.96
2	7	0.049	7	8.4	2.2	1	19	932	950	932	954	0.94
3	7	8.9e-06	0.0013	20.2	0.4	1	23	960	982	960	982	0.98
4	7	3e-06	0.00042	21.7	0.2	1	23	988	1011	988	1011	0.96
5	7	5.3e-07	7.5e-05	24.1	0.6	1	23	1017	1039	1017	1039	0.99
6	7	6e-06	0.00085	20.8	2.0	1	23	1045	1067	1045	1067	0.99
7	7	8.8e-06	0.0013	20.2	3.2	1	23	1073	1095	1073	1095	0.98

Sequence Information

Coding Sequence: atgaatggtACAGAAGTGTTAAAGGGAATAGAAAATGGatctttacattttattacaatacCAAGAGAGGAGTTTATAGATCatacTCTTCTGCCGGACTATATAACAACACATGGATTTATTATCGATACTATGTTGGATAGTAATGACGGTTCGAATAACGAAACATCACAACAAGCTAATCCTACATTTGTCACATATAATTCTGGTCAAACCTTAGTGAATACAAATGAAACTCAATTACAATCTAATTTGTATGAAGGTGATAAACGCTTAAGTGGAACTTTATTTCAATTAGTTAAAGGAGGTAATATTCGAATAAGTGGAACAAATAATACAGAGACCCAAGTAATTGTGACAAATAaagatttgattaatttatctgGATCACAAATAATTGACACAACAGTTAAAAATGATAACTCAAATAGCTTAGATACAAGcacatttttaacatttgatgATCAACCAAGCTTAACAAATTCATTACTGAATGATGGGCAATTCAGAATATTTCAACCACCTTCACCTAATACACATCAACAAACAATTCAAGTAAATTCACCTAATAACTTTTCTTTACCCCAATCAATTCCGATTAGAAGACTGAATCGAAATCTTAAAAGTtcaataaacttaaatattgcAGAACAAATGACAATCGATAATTTAAAAgATAATAATGAAATAGAGCAAATCCAAAGTTTTCAACAAAGGTCAACAGCAAAAAAAGTCTTACCCCATAAAAAACGAATCACCAAAAAGTTAAAATCTATTGATTTAAATGACAGTGTAGATGCACTTTTTCAGCAACCAgataattcaacaaaatcacCTACGGCCCAAATGCAATATTTGCAAGatttaaatgaagaaattaatgCAGAGGAAGTTattTTTGCATGTCAAATTTGTGGTTTAAGTGCAGAATctcaattagaatttttttcacatttaaaattacattatgaaCCTAAAACTGAAAGCACAGATATTCcagaaatttcaataataagaTACGAACCATCAGatgaaaaagaatttttatcaCGTCAGCCTCAGTCAGAATCACAAATTCAAATGTCTATTAATCAGGAACAATCATGTCATTATCAACAATTGTcacaaataaaaagacaaaatatacaAGAACAGCAAAATAAAATCGCTCagaatcaaacaaaaacaataataattgaaacaCCTCACTATCAAAATTTACCtcaaataagaaaacaaattcaacaaaataatgagCTATCAAGCCAATCTAATGATCCTACTGCACTAATTACCCATCACTCAAATCCTGAACAAGGATACTTAattacgaataaaaaaattgttacgaCACGAGATTTGTCGGATGTAACGAGTTTTGCATTcgaaaatttttctcaaataacTTCCATAGCAGATCCATCTAATTCAAATCATACGGTAACAACTAAAGATATTGGTACACCGCATGAGTACCAAATATTAGATTCTtcgatagaaaataatttacaatcagAAGATTCTAATCAAGAGCAAATTtctaaacaaacaaattttcttaatttgcaATCTAATGATAATCAACATATACCATTATCTCCTAGAACACTTTTAAATCAAACAGAAGTcgtaaattctaaaatatttttacaacatcaacaaaaccaaatatTAATTCCTCAAAAtagattaaacaaaaatgttgaccAAAAATCTCAACATTCCCAActagttttacaaaataatgcaGTTTATAATCAATCAACAATACAAGATGTATCTCaagtagaacaaaatttgtttggGAATGCccaatattttgaaacaaaatttacagGATTACCCAACCAAGTATTAAATTTAGAACAGAAAATTGATGCTATAAGAGCTGAAAATGATATTTCACATTCAATATCTAATCGAACCAATAACATAATGGATACCGATACTCTAGTTCAATCTACTTTAAtttgtgaaaatcaaaatagtttgcataatcaaatacaaatagGAAGTTCTGAAACAACCAATGAAACAGacgaaacagaaaatataaCACCAAGTATAGGGCAACTTCATGAGGAAAATACAAATCACTCTAATTCACATAAATCAAATTCACATGGTATTGTCATATTAGAACACgatgaaattgaatttagtgATCCTGAAGATATGTTGGAAGGAATTCGTAGTGTGGTTGATAAGGTTCAGGAATCGTTTGACACCGGAGATGAAATGGAACCAATGACTCCACCAAGAGAAAAttgGATTCAAAATTCTTTTAAGGATGAAATAGTttctaaatcaaataattattgtgCAAATTCTTGTTTTGAAACAGCCACTACagtggaaaattttcaaatatttttcaaaaatgaagaaaaaccaCATGATCATCCATGGGAATTGTCTGATGTAGTTGTTGTAAAACAACATGAATTACCTAAGAAGAGTTATTGTGATGATAACGAGAATAACTCTTTATCGGTGTCTGCTGAAAATTCTTTAGAATCAAGTAAAACTAATTCAGCTCCTACTGGTTTAGAAATTGATAATGATATATCAgtgaaaatgaaatgttttgCAAATGATATCGAAGATTCATCgtcaataaattttgaaaaaaatcaaactgtAACAGAAAACAACGAAAATTCCTCATTTAGTAACAGATCAAAAGATTCAAGTATATGTGATAAATCGGAATGTGAATCCCCTATTCCTAAAACTGAGAAAGAAACCTTAAAAAATTGTGGAGTTTTAtctggaaagaaaaaaaagaaaacatatttttgtgataagtgtttgaaagtatttaattcttcaaatgcTTTGAAGTATCACGATTTTTCTCACAGTGGGGCAAAAGCTTTTACTTGTGAAGAAtgtggaaaaagtttttttgcCCAAAATGCCTTAAGAGCGCACAAAAGAGTACATTCAGGAGAGAAACCATTTACATGTGACGAATGTGGTCGAGCATTTAGACAATGGGGCGATCTAAATTATCATAGAATATCATTACATTCAAATGAAAAGAATTTTCAATGTGAATTTTGTGGAAAGGCTTTTGCTAGAAAATATTCTTTAGTTATTCATCGAAGAATTCATACACAAGAAAAAAACTACAAGTGTGAATTTTGTCCGAAAACATTTCGCGCTAGTTCATATTTACAAAACCATAGAAAAATTCACActgGTGAAAAACCTTATGAATGTCCTACATGTAAGAAAAAATTTCGTGTTTGTGGAGATCTTAGACGTCATCAAAAAATACATGATAAAGTTAACAAACCGAAAaatcctaaaattaaaattgacttagaaaaaaatgaaaaaaaagcaatttctTTAGATGATTTTATAACAATTCTCACCGATAATGTGATAAATATACAAACACAAGATGATaatgaaaaaattgttaacacttgcgataaatcaattaaaaatgaagTAGATCTCAATTCACCAGCTATTATGTATACACCAGATGGAAATCTTGATCAAATTTTTAAGACTGATAATATTACTTCAAATCCAATTAAAAATCCTTCATCCACATTACCTGAATCGAATCTGGAACCTTTTGATTGA
Protein Sequence: MNGTEVLKGIENGSLHFITIPREEFIDHTLLPDYITTHGFIIDTMLDSNDGSNNETSQQANPTFVTYNSGQTLVNTNETQLQSNLYEGDKRLSGTLFQLVKGGNIRISGTNNTETQVIVTNKDLINLSGSQIIDTTVKNDNSNSLDTSTFLTFDDQPSLTNSLLNDGQFRIFQPPSPNTHQQTIQVNSPNNFSLPQSIPIRRLNRNLKSSINLNIAEQMTIDNLKDNNEIEQIQSFQQRSTAKKVLPHKKRITKKLKSIDLNDSVDALFQQPDNSTKSPTAQMQYLQDLNEEINAEEVIFACQICGLSAESQLEFFSHLKLHYEPKTESTDIPEISIIRYEPSDEKEFLSRQPQSESQIQMSINQEQSCHYQQLSQIKRQNIQEQQNKIAQNQTKTIIIETPHYQNLPQIRKQIQQNNELSSQSNDPTALITHHSNPEQGYLITNKKIVTTRDLSDVTSFAFENFSQITSIADPSNSNHTVTTKDIGTPHEYQILDSSIENNLQSEDSNQEQISKQTNFLNLQSNDNQHIPLSPRTLLNQTEVVNSKIFLQHQQNQILIPQNRLNKNVDQKSQHSQLVLQNNAVYNQSTIQDVSQVEQNLFGNAQYFETKFTGLPNQVLNLEQKIDAIRAENDISHSISNRTNNIMDTDTLVQSTLICENQNSLHNQIQIGSSETTNETDETENITPSIGQLHEENTNHSNSHKSNSHGIVILEHDEIEFSDPEDMLEGIRSVVDKVQESFDTGDEMEPMTPPRENWIQNSFKDEIVSKSNNYCANSCFETATTVENFQIFFKNEEKPHDHPWELSDVVVVKQHELPKKSYCDDNENNSLSVSAENSLESSKTNSAPTGLEIDNDISVKMKCFANDIEDSSSINFEKNQTVTENNENSSFSNRSKDSSICDKSECESPIPKTEKETLKNCGVLSGKKKKKTYFCDKCLKVFNSSNALKYHDFSHSGAKAFTCEECGKSFFAQNALRAHKRVHSGEKPFTCDECGRAFRQWGDLNYHRISLHSNEKNFQCEFCGKAFARKYSLVIHRRIHTQEKNYKCEFCPKTFRASSYLQNHRKIHTGEKPYECPTCKKKFRVCGDLRRHQKIHDKVNKPKNPKIKIDLEKNEKKAISLDDFITILTDNVINIQTQDDNEKIVNTCDKSIKNEVDLNSPAIMYTPDGNLDQIFKTDNITSNPIKNPSSTLPESNLEPFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -