Basic Information

Insect: Argyra leucocephala
Gene Symbol: -
Assembly: GCA_963942445.1
Location: OZ012681.1:53698886-53703164[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.011 1.6 10.5 0.5 6 23 267 284 267 284 0.98

2 9 0.00022 0.031 15.8 1.6 1 23 290 313 290 313 0.96

3 9 5.9e-06 0.00084 20.8 0.5 1 23 321 343 321 343 0.97

4 9 2.7e-05 0.0038 18.7 2.8 1 23 351 374 351 374 0.97

5 9 2.2e-06 0.00031 22.1 0.4 2 23 381 403 381 403 0.96

6 9 0.00039 0.056 15.0 3.0 1 23 411 434 411 434 0.95

7 9 5e-06 0.00071 21.0 0.4 1 23 443 466 443 466 0.97

8 9 2.7e-05 0.0039 18.7 0.3 1 23 472 494 472 494 0.96

9 9 9.7e-05 0.014 16.9 10.0 1 23 500 523 500 523 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.011	1.6	10.5	0.5	6	23	267	284	267	284	0.98
2	9	0.00022	0.031	15.8	1.6	1	23	290	313	290	313	0.96
3	9	5.9e-06	0.00084	20.8	0.5	1	23	321	343	321	343	0.97
4	9	2.7e-05	0.0038	18.7	2.8	1	23	351	374	351	374	0.97
5	9	2.2e-06	0.00031	22.1	0.4	2	23	381	403	381	403	0.96
6	9	0.00039	0.056	15.0	3.0	1	23	411	434	411	434	0.95
7	9	5e-06	0.00071	21.0	0.4	1	23	443	466	443	466	0.97
8	9	2.7e-05	0.0039	18.7	0.3	1	23	472	494	472	494	0.96
9	9	9.7e-05	0.014	16.9	10.0	1	23	500	523	500	523	0.96

Sequence Information

Coding Sequence: ATGGTTTGTCGATTATGTTCTAGGCATAGTGAAAATCTTATCCATTTTTTCGACACAGAAGGCCTAAAAATGGAAATTGTTAATATTGTAGCAAAACATTTTTGGTTTaagcCAAAACCAGAAGATAATACTTCACATCTAATATGTACTCCATGTTGGACAATTACAAGAAATTTCCATGAATTGTATCTACTTgtagaaaaagttgaaaaagatTGGACTAAAAGCTTGATTGAAATAAAGGCGGATCCATGCAATGATTTAATAGGAATAGATTTTGATGATATTGTTAATCATCATGGTGAAGagacatcaaaaaattttgaaaatcagaCTAGTATTGTTGAGGGAAAATCTGATtctcaaatacaaaaaacaaatgattctgaggatcaaatattaaagttagaagatactGATTCAGAAAATGATAATTTTGCTGATGATGATGTCAAatcagaagaagaagaagaaatcaaACCAATGATAAAAAAACGTGGACGACCTcctaattctaaaaataaacttagaAAATCaaaacgtaaattaaaaaaagatgaaGAAATTGATGATGAAGATTTTGATGAAGTTAAAgataagaaagagaaaaaacaaagaGCACAAAAACGAACAGCGGAAGAAGCAGCCgcgtttaataaaaaagtagctGAAGGTGATGCTTTAATTGcaagatttttgaaaatatattgtaatgttTGCTCAGTGGAACAgataaattttacaacattaaaaCATCATTGCACTTCAGTGCATGGTCAGTCCGGATTTGTTATGTGTtgtgaaaagaaattttttagaaaaagtaaATTGGTTGaacatattgaaaaacatattgATCCTCAAAAacataaatgtcAGATTTGTAATCATGTTTCAGCTAATCgttggaatttaaaaattcacatGGACAGTATACATAAAGGTATACAAGCAAAACCATTTAAGTGTACATATTGTGGTAAAGATTTCAAAATACAAGCACAATTGGTACGGCACGAACTAATTCATTTGCCAGAAGAACAAAGAAAGTTTAAATGTTCTTATTgtgagaaaaatttcccATCAGAGGCcagtttaaaatatcatataCGATTATGTCATGAAGGATATTATTCTGGTGTTTGTGATATCTGTGGAAAAGCATACAATAACAGACAAGACTTGAAAAGACATCGTCGTTTGGTTCACGAAGGAGTTGAAAGATCaacatataaatgtaaatattgtaatatggaatttgcttcaaaatattcctataatatacataaatttcgAGAACATGAAAATCAAAATCCAAATATTGATTACAAATGTAcaatatgtaataaaacatcAGCTAATTCTGAAGCACTCAAAAATCATATTCAATATGTGCATAAAGCAAAAGCAAAATTTGAATGTACTTCATGCAAGAAAGTATTTAAAAGAGAAATTGCACTTAAGgagCATATGGCTGCTCATATTGGTCAATCATTGTATTCATGTCCGCATTGTCCAAAAACTTTTACTCATAGTTCAAATATGCATCATCATAGAAAATTGAAACATCCAgtagaatttgaaaataatcgTAAAATTAGAGATGATAAAAAGGAAACATGGAGAGAATTAACCagtatttaa
Protein Sequence: MVCRLCSRHSENLIHFFDTEGLKMEIVNIVAKHFWFKPKPEDNTSHLICTPCWTITRNFHELYLLVEKVEKDWTKSLIEIKADPCNDLIGIDFDDIVNHHGEETSKNFENQTSIVEGKSDSQIQKTNDSEDQILKLEDTDSENDNFADDDVKSEEEEEIKPMIKKRGRPPNSKNKLRKSKRKLKKDEEIDDEDFDEVKDKKEKKQRAQKRTAEEAAAFNKKVAEGDALIARFLKIYCNVCSVEQINFTTLKHHCTSVHGQSGFVMCCEKKFFRKSKLVEHIEKHIDPQKHKCQICNHVSANRWNLKIHMDSIHKGIQAKPFKCTYCGKDFKIQAQLVRHELIHLPEEQRKFKCSYCEKNFPSEASLKYHIRLCHEGYYSGVCDICGKAYNNRQDLKRHRRLVHEGVERSTYKCKYCNMEFASKYSYNIHKFREHENQNPNIDYKCTICNKTSANSEALKNHIQYVHKAKAKFECTSCKKVFKREIALKEHMAAHIGQSLYSCPHCPKTFTHSSNMHHHRKLKHPVEFENNRKIRDDKKETWRELTSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -