Aleu010611.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- hang
- Assembly
- GCA_963942445.1
- Location
- OZ012678.1:93179279-93186629[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0067 0.95 11.2 2.7 1 23 247 270 247 270 0.94 2 20 0.21 30 6.5 2.5 2 22 352 372 351 372 0.93 3 20 0.0014 0.2 13.3 0.9 1 23 437 460 437 460 0.91 4 20 0.39 55 5.6 2.8 2 23 501 523 500 523 0.93 5 20 0.0065 0.92 11.2 0.3 3 23 589 610 587 610 0.93 6 20 0.0018 0.25 13.0 0.2 1 20 618 637 618 637 0.98 7 20 0.024 3.4 9.4 0.4 2 23 655 677 654 677 0.92 8 20 0.0013 0.18 13.4 1.2 1 23 821 843 821 843 0.98 9 20 0.0027 0.38 12.4 3.9 2 23 890 912 889 913 0.95 10 20 0.029 4.1 9.2 0.6 2 23 921 943 920 943 0.95 11 20 0.00093 0.13 13.9 0.1 1 23 957 980 957 980 0.98 12 20 0.014 2 10.2 0.5 1 23 1038 1060 1038 1060 0.98 13 20 0.0021 0.3 12.7 0.9 1 23 1068 1091 1068 1091 0.96 14 20 0.16 22 6.9 3.9 3 23 1100 1121 1099 1121 0.94 15 20 0.00012 0.017 16.6 0.2 2 23 1192 1213 1191 1213 0.97 16 20 1.4e-05 0.002 19.6 0.2 1 23 1248 1270 1248 1270 0.97 17 20 6.7e-05 0.0094 17.5 1.2 1 23 1299 1322 1299 1322 0.94 18 20 0.25 35 6.2 0.4 2 20 1339 1357 1338 1359 0.91 19 20 0.00014 0.02 16.4 0.1 2 23 1372 1393 1371 1393 0.96 20 20 0.015 2.1 10.1 0.1 2 20 1528 1546 1527 1549 0.90
Sequence Information
- Coding Sequence
- ATGTCTGAGCAAATGATTGTTCGGGCGAGGCAAAATTGTTGCCGTTTGTGTTTAGCACCAGACAATGAATGTATTTCAATTTACGGGAATTTAGTGGCAGCTGATAAGGAAACCATTTCAAGTAAAATTCATGCTTGTGTAAATATAAAGGTTACCAGAGATGATTCGCTTTCAACAAGAATATGTCATTTATGTATTAGTTACTTAAATTGTTggcaaagttttaaaaatagatgtaTATCTGCACAAAGAAAACAACAAGAATGGCTGATTGGAGCGAATGTAAGACTAGAAAATGAATTATATGGTATGAGAGATTTACATTATAATGAATCCTCAAATAATGGAATGAATTTAACAACAAATGAGAAGCCAAGGCATATACCTATACAAATTAAAGAAGAGCCTTTAGATGAATCTGAAGAAGTCAAAACTGATGAGGAGGATTCTGGAAGATGTGACATAGATCCAACTCAATTTCTTGCTACGGATGTTATTGaagaagaagaattaaaacGTTTGGcagcaaacaaaaatttaacaataacaaaaagtgGAGGTGAAAATGGTCCACAAATTCTGACTTCATTAGGGTTACAATCAATTAGTAATGATAATGTTAGCCCATTTGCTTTTTTaaGCGCTTCACTTGGTGCCTCTGCTGATAATTTAAATGAGCTTACTTCAGACAATAAAGATCGAATTTCTATATCTCCCGGAGCACCATCCCAAAAACCACATGATTGTCGGATatgcaaaatgaaattttctacaAGAGCAAATGCACGTCGTCATGAACGTAATTTACATGGTTTAATAAATGACGTTGCAATGTCTCCTCTTTCTTTATCAACGAATCAAAATTTATCTTTAGTACAAACTTCATcaacaccaaaaaataaaagacgTAAATCAAATATTGGTCCATTAACACCTGAAATGATGGGAATATATGAATATGACAAACCTGAAAAATATCGACACATGCTAACCGAACAAAAATTAGCATTCATCGAggaatttgaagaatttttaaaacaataccAGACTCTTACATGCAAATGTTGTTCCAAAGTTTAtcccaaatataaaaattttatggctCATATGAGAAAAAAATACCCCAGATTACCAAGAGCTAGTTGTTTTAAATgcttaaaacaatttgaatCGAAAGCAATTTTTGTATCACATGTTAAACGTCGAAATTgcattaatttatacaaattgtatatgAATGATCCAACCTTCGAAAAGTAtgataaaatagataaaatgaaagCTAAAGAgcttttagttaataaattatacGAATGTAGACTATGTCCAAAAGAATTCCGTTTAAAATCAGATTTTAGAAATCATGTATATGAAGATCACAATGATGTGATCCAAAAGAAAGAAGCTTCGTCGGATAGTTGtgtattttgcaatttaaaaattgaagactCTGTTGAACGTAAAcgtcattataataatatggaaTGTATTTTACATATACGCTGTAGTACCTGCAATACCAAATTTGAAACACATCAAACCTTTTTAGAACATGTTTACAAAGATCATGTTCCATTACAAACAAATAATAGCAAAGATAGTAAACCATCTAATTTATTATCAGAATCTAGTTTCGCTAATgattatgaagaaaatatcgATATGTCCCCACATAAATCAAGTCAAAATGAATCAACGACGTCTCGGGATGTTGAAAGCGTTCCACCAGTAAAAACACAATTTCATTCAAGAATGCcacaaaactgtaaaatttgTGGCGCCCGCTATAATAACTACAACAATGTTTTAAGACATATGGAAGCTAAGCATCCTGATCAATTGCCTCAAACTTATAAATGTTCTTTGTGTTTTGTGGGTTTTCCCCGACTATCGAATTTAAGGGAACATATGTGGGATGTACATAATAAGAAATTAGCAAAACCGAAACGCGATGCGGAAATATATTGTAGAATATGTTTAGAGAAATTCACTGACAAAGATAGTTGGGTAAAACATCAAACGGAACAACACGATAGGTATATATGTTGCATTTGTTATTCTCAATATGATGATGTTACCGTTTTCAAAgatcatattaaaatacataccaGTCTTTCACATCCAAGACAACCGAACTCAGttcaaaattcttcaaatacTTCACAGGATTCAACTAAATATACAGGTCGTTTTGATTATGTAATGAAAGATTTAATGTCAATTACTAATGGAAGTGGAGGCAACAATGACGAAACTGATAGATTAGATTATGAGGGACCCCCAaccaaaaaacttaaatttgatcATGAATCGCATGAATCACAAAATGAGTtagatttatcaaataaattagaaacaaacGTTTTCGGTGAACAACAACTTGCACATCCTACCTCTAGTATAATCTCGAATTCTAATGAAGATCAAAAGGAATCTACTGCAAAACAATTAGCAAATTTATATGAATGTAATATATGTCATTCACTTTTCAATAGTAGTCAAGGATTATCAAATCATATGAGAGCTCATAATGCTCACGAGATAGCTAGGCGTACGAGTTTGGGTTTGCCTCTAACTaaagaacaaaaacagaatgttttagataatgaaaacaaattcactaaaaataatCAAGTTCTTGCTTTGGAACATCGTTTTAGAAGAATGCGATGTAGATTATGCCAAAAAAGGTTTTCTAGTAAAAAAGTTTATAGGCGTCATATGTTAGTGGATCATCATGTGCAGAACGTTCAATTTATACATTGTGCTATTTGTAGAGCTGAATTTGCACATGAAAAGGGCTTAAAAGTCCATATGATTAAAATACATGGTAAAATATTGAGAGATATTGGTATAGAAAATTTGCAATATGAATGTGACGTTTGTTCAATTGTTTATAAAAGTGAAGAAGAATTAATGTCTCATAAGCAAACAGTACATAATTTGGAAATTGATTTATCTAAAGatGGAACTAATGTATCAAATACGAATTCCAATAGCagtaataagaataagaatactaagaataataataagaataataacaataataataatagtaataatgataacatttctttaaaacaaaCCAATGAAGGTAATCAGTATTGGTTCCAATGCAGATATTGTGCTAGTAATTTCGATAGCAATAAGAAACTTgctattcatattaatattcatGACGAATTCGATTCAAGTGATTATTCATGTAAAGATTGTGGTAACGTTTACAGCGGCCGTAAAAGTTTATGGGTACATCGATATAAAAAGCATCCAGTGTTACCATCACCATCATTCTGTGATATATGCAATAAAATGTTCTTCACGAAAGATCATGTGGAATTTCATATGCAACATGTACATAAaatgcataataataaaaatcatatgaatCAACATAATTCAATGGATGGTGGTAGTAGTAGTAGatcgtataataaaaataacaatgaaacaTGTGACAGTAATTCAGAACATCGTACTAGTGAAGATGATCTTCACAAAGAAATAATTCACGTTAGTGGCGAAGATGTTCAAACAGTTCAATTATCTGTACAGCAAATTCCACAAGTTCCTTGTTCAGTGtgtcaaatgaaattttctgaTGAAGAAGCATTCACAAAACATATGaaaatacacGAGGAATCTTTCTATACAGATAATCCGTTGGCCTCAATGTTTGATACGGAACCTGAAGATCCAGATTTAGTGCTACAAAAACGTATAAATGAAAATGGTGAATTTGTATGTGATATTTGTCCAAAAACATTCCAACAGTTATCAGCTTTAAAAGTTCATCGTAATTGGCATTTTAGAAGTGATGGGAAGCAgACTCAAGCTGATCCGAATGTTTGGCGTTCGTTAGctaaaaaacgtaaaaattcAAGTTTGTCATTTAAATGCCAATACTGTACCCAGACATTTGCTTCGTCCAGTGTTCTTAAACGTCATATTTCTGATTTGCATAAAgaagttataaaaacaaaattgtcatCGGATTTAGAAAAACCATTAGAATGTAGAAAAtgcaacatttattttaaaactcaaaaAGAATGGATAGAACATAAAACTTCAGACATAAAAGAAATTTCCTATAATTTATCAGAGTGGGTTTGCGATATATGTGGGAAAATAGTAACTAGGAAAGATCGATTAATTCAGCATATGTATTCTCATTTAAGAGAAAGTGAACTTAAAGCTGCGattgaagataaaaaattattaaatgtgaaGTATAATTCAGAAAGTAAATCTGATACAAGTGAAGGAAATAGTAATTCAAAAGACATTCATGCTCATAATGGCAGCAACAAtgataaattattgtatttagagaataataacgaaaacaaagaaaacacaaataaaatttctggtGATAATTCTTCTATTGACACGAAAGACCAGGAAGTTCATTCAGATTCTACATCGGACTCTGATTCTGAAACAGATGACTCTGATAATTACAATAATGACGAAGATATTGAAAACGAGGAAGAAGACATTGAAAATGATGAAGAAGAAGATAAAGATGAATATAATGACGAAGAAGAAATGAATGATACATCTGGTCCACAATCTTGTGATTTATGTCAAATAACGTTTGACACAGCTCAGCAATTGACAGCCCATGTACCAACTCATTTTTTCCATCAAGCACCAGTTGAAGTACGTAATGAACAAATTGTTACAGAGCCAACTTCAAAAAATGATGTAGTTAAGGAGTTTAATGAAAACGTAGGTGGGGAATCGGAATctgaaaaaaacattgaaataaagctAGAAAGTAATATCGCTGAAAAAATACATACtgaatcagaaataaaaattaaaaaagagtatcaagaaaatgataaaaaagaaaaatctgacttaatatcaattaaaaaagagTTATTAGATGTTGAACCAAAGAAATATTCGGATAAGCTGCCATTTAATCACAAAgatataattataaagaaagaaATTCCAGATCCAGTGATTATAATGGATACTGATGACGACGAATGTGATTACAGtgaaaacaaacaaatgaaACCGGTATTCCCTGAAACTAATGATGATGAGGATGATGAGTCCATATATGATCATGAATATGATAAAAATGTCAAACCAATAATTACGAAGTTAGATGAAAATCCTGCTCGTGTTACCAATAATGCGGATGATGCTGATGAGGATGAaaatgatgacgatgatgatgatgatgatgatgaagatggtgatgatgaaggtgaagatgatgatgatgaagatgatgatgacgatgatgatgatgatgaagatggtGAGGATGAAGGGGACGATGATGATAATATGACGGAAACGGTTGGAGAAGAAGTTATTGGCGAAGAAGTGGTACACGATGATAATGCTGAATATCACGAAAATAATACTATTGATTCAAATTCATGTTCTGATTCCAATTCAGTTCCTGCTGCTAAATCTGTGGCAGTACATAATGGCGAAAAtgacaatgataatgataaagaAGATGAAAATAATGAGGATAAtggaaaatatgtaaatttcatggatgatgatgatgatgatgatgatgaggaaAATTCTGATGAAGAAATTGAAGATGAACAAGATGAAAATACTGAAATTGAGTGA
- Protein Sequence
- MSEQMIVRARQNCCRLCLAPDNECISIYGNLVAADKETISSKIHACVNIKVTRDDSLSTRICHLCISYLNCWQSFKNRCISAQRKQQEWLIGANVRLENELYGMRDLHYNESSNNGMNLTTNEKPRHIPIQIKEEPLDESEEVKTDEEDSGRCDIDPTQFLATDVIEEEELKRLAANKNLTITKSGGENGPQILTSLGLQSISNDNVSPFAFLSASLGASADNLNELTSDNKDRISISPGAPSQKPHDCRICKMKFSTRANARRHERNLHGLINDVAMSPLSLSTNQNLSLVQTSSTPKNKRRKSNIGPLTPEMMGIYEYDKPEKYRHMLTEQKLAFIEEFEEFLKQYQTLTCKCCSKVYPKYKNFMAHMRKKYPRLPRASCFKCLKQFESKAIFVSHVKRRNCINLYKLYMNDPTFEKYDKIDKMKAKELLVNKLYECRLCPKEFRLKSDFRNHVYEDHNDVIQKKEASSDSCVFCNLKIEDSVERKRHYNNMECILHIRCSTCNTKFETHQTFLEHVYKDHVPLQTNNSKDSKPSNLLSESSFANDYEENIDMSPHKSSQNESTTSRDVESVPPVKTQFHSRMPQNCKICGARYNNYNNVLRHMEAKHPDQLPQTYKCSLCFVGFPRLSNLREHMWDVHNKKLAKPKRDAEIYCRICLEKFTDKDSWVKHQTEQHDRYICCICYSQYDDVTVFKDHIKIHTSLSHPRQPNSVQNSSNTSQDSTKYTGRFDYVMKDLMSITNGSGGNNDETDRLDYEGPPTKKLKFDHESHESQNELDLSNKLETNVFGEQQLAHPTSSIISNSNEDQKESTAKQLANLYECNICHSLFNSSQGLSNHMRAHNAHEIARRTSLGLPLTKEQKQNVLDNENKFTKNNQVLALEHRFRRMRCRLCQKRFSSKKVYRRHMLVDHHVQNVQFIHCAICRAEFAHEKGLKVHMIKIHGKILRDIGIENLQYECDVCSIVYKSEEELMSHKQTVHNLEIDLSKDGTNVSNTNSNSSNKNKNTKNNNKNNNNNNNSNNDNISLKQTNEGNQYWFQCRYCASNFDSNKKLAIHINIHDEFDSSDYSCKDCGNVYSGRKSLWVHRYKKHPVLPSPSFCDICNKMFFTKDHVEFHMQHVHKMHNNKNHMNQHNSMDGGSSSRSYNKNNNETCDSNSEHRTSEDDLHKEIIHVSGEDVQTVQLSVQQIPQVPCSVCQMKFSDEEAFTKHMKIHEESFYTDNPLASMFDTEPEDPDLVLQKRINENGEFVCDICPKTFQQLSALKVHRNWHFRSDGKQTQADPNVWRSLAKKRKNSSLSFKCQYCTQTFASSSVLKRHISDLHKEVIKTKLSSDLEKPLECRKCNIYFKTQKEWIEHKTSDIKEISYNLSEWVCDICGKIVTRKDRLIQHMYSHLRESELKAAIEDKKLLNVKYNSESKSDTSEGNSNSKDIHAHNGSNNDKLLYLENNNENKENTNKISGDNSSIDTKDQEVHSDSTSDSDSETDDSDNYNNDEDIENEEEDIENDEEEDKDEYNDEEEMNDTSGPQSCDLCQITFDTAQQLTAHVPTHFFHQAPVEVRNEQIVTEPTSKNDVVKEFNENVGGESESEKNIEIKLESNIAEKIHTESEIKIKKEYQENDKKEKSDLISIKKELLDVEPKKYSDKLPFNHKDIIIKKEIPDPVIIMDTDDDECDYSENKQMKPVFPETNDDEDDESIYDHEYDKNVKPIITKLDENPARVTNNADDADEDENDDDDDDDDDEDGDDEGEDDDDEDDDDDDDDDEDGEDEGDDDDNMTETVGEEVIGEEVVHDDNAEYHENNTIDSNSCSDSNSVPAAKSVAVHNGENDNDNDKEDENNEDNGKYVNFMDDDDDDDDEENSDEEIEDEQDENTEIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -