Aleu027332.1
Basic Information
- Insect
- Argyra leucocephala
- Gene Symbol
- Zbtb41
- Assembly
- GCA_963942445.1
- Location
- OZ012681.1:13028378-13040330[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.98 1.4e+02 4.4 0.3 2 13 65 76 64 78 0.89 2 27 0.0089 1.3 10.8 1.1 1 23 107 129 107 129 0.92 3 27 0.81 1.2e+02 4.6 0.2 2 12 188 198 187 203 0.88 4 27 0.15 21 6.9 0.2 1 23 230 252 230 252 0.93 5 27 0.00034 0.048 15.2 1.3 1 23 301 323 301 323 0.97 6 27 0.0021 0.3 12.7 4.0 2 23 329 350 328 350 0.97 7 27 0.34 48 5.8 1.3 1 23 356 379 356 379 0.90 8 27 0.23 33 6.3 2.8 1 23 385 410 385 410 0.91 9 27 2 2.8e+02 3.4 0.2 2 13 417 428 417 429 0.90 10 27 0.13 18 7.2 0.1 3 20 555 571 553 573 0.80 11 27 0.0063 0.9 11.2 5.0 3 23 666 686 665 686 0.98 12 27 0.00021 0.03 15.9 1.5 2 23 692 713 691 713 0.97 13 27 0.00036 0.051 15.2 0.4 1 23 719 742 719 742 0.93 14 27 0.15 21 6.9 0.8 2 19 749 768 748 773 0.81 15 27 0.00011 0.016 16.8 0.9 3 23 781 802 780 802 0.98 16 27 0.0015 0.21 13.2 1.7 1 23 810 832 810 832 0.96 17 27 0.018 2.6 9.8 3.8 1 23 838 861 838 861 0.97 18 27 0.87 1.2e+02 4.5 0.2 3 11 947 955 946 957 0.89 19 27 2.1 2.9e+02 3.3 1.6 3 23 971 989 967 989 0.70 20 27 0.0026 0.38 12.4 0.5 2 20 1069 1086 1068 1088 0.89 21 27 0.0024 0.34 12.6 1.6 2 23 1146 1167 1145 1167 0.96 22 27 7.8e-06 0.0011 20.4 1.7 2 23 1173 1194 1173 1194 0.98 23 27 8.2e-05 0.012 17.2 0.3 1 23 1200 1223 1200 1223 0.96 24 27 0.23 33 6.3 1.0 2 23 1230 1254 1229 1254 0.84 25 27 0.00026 0.037 15.6 2.6 3 23 1262 1283 1258 1283 0.94 26 27 0.078 11 7.8 1.2 1 23 1291 1313 1291 1313 0.93 27 27 0.13 18 7.1 5.2 1 23 1319 1342 1319 1342 0.87
Sequence Information
- Coding Sequence
- atggATTCAGAGGAACATgatgaatcaaatttaaaaattaattatcaaaattatgataattataatagtaaatatGATGATAGTGATGAAGTTTCTAATAGtgttagtaaatttattaaaattgaattagaagATGACGAATCAGCTATTGAGGATGTTAGCAATAACCATCAAATTGATGCTTCTGTTATTTATTGTCCTCactgtgaattaaatttttcaaataagcaAAAACATACTTTAGAAAAATGTGAAatagttcaaaaaaaaattttaaaacataaaagaaatttcaaaattttggaaacagaaggaatatttttatgcaaatactGTCCAAGATATTATGAAACCAATAGCAAACTACTAAATCATGAAGGGAAACATACAAATTTGAATACATTTGAAAATCGtgaaaaagatttcaaaatggttttaagaAACAATGATTTTGATAAGCAAACtaatatatatgataatttGGGAAAAGATTATGATATTTATTCAATTGAGGAGTCTCCATCAGATGCAgaacataatacaaaaaaagaaaattcaataagaTGTTCTCACTGCAATATAGTTTTCAAAAGTGTTCAGAACCACGATCATGTTTTAtgccaaaaaatacaaaaaattaaattaaaaacgaaaaattattttgcaattctTTCAGAAAAAGGGATATATGTGTGTCAAGAATGTCCACAATATTTCGATGATGAAAACGAGTTGATTTTTCACCAAggcaaacataataataatgaacgttgtttaatttgttttgaaacattggaaaatttagatttacttGAACATATAAAATCTTTTCATCCAAACACTTCTTTAAAAGAAatcatgaacaaaaaattaaaaaaaaaaaaaataaataaagaattgtaTGATTgttcatattgtaaaaaaaaatttgtttcagaaATATATTGGAAACGACATATTTTGAatcatgaaaataataaattacaatgtaaattttgtaataaaatatgccaaaacacaattcaattaaaaaatcatataagaACGCATACAGGAGAACGTCCATTTATTTGTCAATTATGTCCTTCAGCCTTTTCTCTTAAACATAATTtagatttacattttatatacaaacatacagAGGAAAAACCATTTGAATGCCGATATGAAGGTGGATGTGGGAAGTGTTTTAAAACTGATCAATTGAGAAATTATCATGAAAAGCGACATACAGGagaaattgttGGAAAATGTGAAATATGTGGTATCGAATACAGAAATAAGAATCCTTCGAAAAGTGAAAACAATTTTCTTGTGCAAGATGAAAAACATTTGAAGGAGGAAATTCTTGAAAATGATGACGATCTACCAATCCAAATGGTTACAAACTCTCCTTGGGTTGATGATATCTTTACGGAtatagaaaatgatttaaaaaaagaggaaaataAATACTATGAAGAAAGGAGAAAATTCAAGGATCCTATAGTTGAAAGAAATGTTAAAATAGACCAAAATGTTATTCCAAATACAAATGAATCGAAATTCGATGATCCTATAGTTGAGACAAATATTCGAAAAGACAAAAATgttattctaaatacaaatgaaagtgaaacaaacttaataaatgataataaaaatgatactgCTAAagtaatctgtttgtactgtggTGAATCTTTTTCAACCGAATATTTCCAAACACATCAAGCCCAAAGAAAATGTGGAAAATGTCCAGTATGTTTACTGATTGTAACAGATTTATTTAGACATGTTCCGAAAAATCACAAAGAATACGTTGAAGAAAAAAGACGTTTAAAGGAACAAGCAGTTAAGAGATTACCATTATCTGAAGATgaaatgacattaaaaaaagtaaaggaAGAAAAGCCAAATTTGAAAGAAGtgaatttacaaaaatcaaatgaaGAAGATACACTTAATGTAGGTGAATTAGAAAATGATCAAAATGATgctaaaaatatacttttatgcaaatattgtgaaaaaactTTTAGATGTAAAGGTAATTATAATAAGCATATAAAACAACATGAAACAAAATCAGATACTTGTGAGTATTGTGGAAAACGCTTTAAATGGTTATCACGTTTAAAGAAACATCTCAGATTGCACACTGGCGAAAGACCATATAAGTGTGAAATTTGTGCAGTATCATTCAACGAAAGTAGTAATTTAAAGGCTCATTTTATAAATAGGCACACAGCaggattaaatataaaatgtacatatgAAAATTGtggaaaagtttttaaaaccAATGCAAGAAGAAGATATCATGAATTTTATGCTCATagtaacaaatataagaatttatgtAAAGATTGTGGTTTGATTTTTAGGACGTCTGGTTCGTTGAATGAACatacaaaaaagaaacatattaaGTATGAAGATAGAGAATTTTCGTGTAAATATTGCgataaaaaatttgcttttaaatttgaattaactcCACATGAAATGATGCATTTAGGTCAAAAACGATATCAATGTGAACTTTGTACCAAAGGATTTATTGCTAGAAAATCTTTCAAAAGACATTGTCGTACGGTTCATGACacagaaaaatgtttaaaaaaagaaattcaagaTGTTGAAGAAGACacaaacatttcaaataattgGACTGAAGTAGATGTAAAAGAAGAGGATGTTAATGAGTTTGAACAATCTGACGATAACGATAATGAAGGGCATTATGATTTTGAAGCTATCAATTATGATATTCCAGAacctttaattaaaatcaatagtCATTTGAAACATGACCAAGAAGAAATTTCCATAGGTGATAATGGAGATAATAATATATGTGAGCATTGTGACAAAGCTTTTCCTAGTGATATATTAGGAAAACATAAAGCTCGCAAAAAATGTGGACCATGTCCAGTTTGTTCTTATAAGTACACAGATTTGTATAAACATTTGAAAACAAATCATATAGAATATTGTGAAGAAAAACGACGTTTAAGAAAGGCTATTATTCCAGGAAAAGGAAGTTCTGGTGTTAAAAGTGGAGAAAAGAAGCAAATgacaaaaaaagttaatatagaAAAACCAATCCCAATGATAATAGAAGAAAATGTTGAAAGTAGTGAAAACGTAGATGAAAAGAATGAAGATGAGAAAAATGAAGATGAAAATAAGGATGACGAAAGTTCTGATACAGAAAAAATTACGTGCAATTATTGTGGTCGAGCTTTCtcgcaaaaaaattttcaatctcACAAAGCTCGAAGAAAGTGTGGAAAATGTCCAGTTTGTTTTATGGTTGTTCCGGACGTTTATGCCCATGTTCCAAATTATCACAAAGAATATAGTGAAGAAAAGAGAAAATTGGGAGAATATGTTGTTAAAAGACTACCTATCATAGGTGAAAAAACTTTCGATAAACcagataaaatattgaaatgcaCTTATTgtgaaaaagtatttaaaacagAACTATTTTATAAGCAACACGTTATTAAACacgaacaatttttaaatacatgtaAAGAATGTGGAATGAGTTTTCAGTATTCATCtggtttaaaaaaacatttaagaaaGCATACTGATGAAAGACCTTTTAAGTGCAAAATTTGTCCCGCTTCATTTAACAATGATGGAAGTTTGAAAGCTCACATTTCTAACAAGCATACCATAGGGCAAAAAGTTAAATGTACTTTCGaaaattgtggtaaaatatttaaaaataaggaaCGTAAAAGATATCATGAACTTTATGCTCACTATAATGAATGTAAACATTTGTGTGTAGATTGTGGGTTAAGATTTAAAACTTCAGGTGCATTAAATAAACACGCAAAAACTATTCATCTGAGTTATGAAGATAGAGAATTCCAATGTAAAttctgtaatttaaaatttgcttttaaatatGAACTTGATCCGCATGAAATGATGCATTTGGGGCAAAAACGATATCTTTGTGAATTTTGTACTAAAGgttatggaaaaaaatctcatttgCGAAGGCATTGCCAATCCATTCATGGTAGagatattgattaa
- Protein Sequence
- MDSEEHDESNLKINYQNYDNYNSKYDDSDEVSNSVSKFIKIELEDDESAIEDVSNNHQIDASVIYCPHCELNFSNKQKHTLEKCEIVQKKILKHKRNFKILETEGIFLCKYCPRYYETNSKLLNHEGKHTNLNTFENREKDFKMVLRNNDFDKQTNIYDNLGKDYDIYSIEESPSDAEHNTKKENSIRCSHCNIVFKSVQNHDHVLCQKIQKIKLKTKNYFAILSEKGIYVCQECPQYFDDENELIFHQGKHNNNERCLICFETLENLDLLEHIKSFHPNTSLKEIMNKKLKKKKINKELYDCSYCKKKFVSEIYWKRHILNHENNKLQCKFCNKICQNTIQLKNHIRTHTGERPFICQLCPSAFSLKHNLDLHFIYKHTEEKPFECRYEGGCGKCFKTDQLRNYHEKRHTGEIVGKCEICGIEYRNKNPSKSENNFLVQDEKHLKEEILENDDDLPIQMVTNSPWVDDIFTDIENDLKKEENKYYEERRKFKDPIVERNVKIDQNVIPNTNESKFDDPIVETNIRKDKNVILNTNESETNLINDNKNDTAKVICLYCGESFSTEYFQTHQAQRKCGKCPVCLLIVTDLFRHVPKNHKEYVEEKRRLKEQAVKRLPLSEDEMTLKKVKEEKPNLKEVNLQKSNEEDTLNVGELENDQNDAKNILLCKYCEKTFRCKGNYNKHIKQHETKSDTCEYCGKRFKWLSRLKKHLRLHTGERPYKCEICAVSFNESSNLKAHFINRHTAGLNIKCTYENCGKVFKTNARRRYHEFYAHSNKYKNLCKDCGLIFRTSGSLNEHTKKKHIKYEDREFSCKYCDKKFAFKFELTPHEMMHLGQKRYQCELCTKGFIARKSFKRHCRTVHDTEKCLKKEIQDVEEDTNISNNWTEVDVKEEDVNEFEQSDDNDNEGHYDFEAINYDIPEPLIKINSHLKHDQEEISIGDNGDNNICEHCDKAFPSDILGKHKARKKCGPCPVCSYKYTDLYKHLKTNHIEYCEEKRRLRKAIIPGKGSSGVKSGEKKQMTKKVNIEKPIPMIIEENVESSENVDEKNEDEKNEDENKDDESSDTEKITCNYCGRAFSQKNFQSHKARRKCGKCPVCFMVVPDVYAHVPNYHKEYSEEKRKLGEYVVKRLPIIGEKTFDKPDKILKCTYCEKVFKTELFYKQHVIKHEQFLNTCKECGMSFQYSSGLKKHLRKHTDERPFKCKICPASFNNDGSLKAHISNKHTIGQKVKCTFENCGKIFKNKERKRYHELYAHYNECKHLCVDCGLRFKTSGALNKHAKTIHLSYEDREFQCKFCNLKFAFKYELDPHEMMHLGQKRYLCEFCTKGYGKKSHLRRHCQSIHGRDID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -